RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
LINCR-0001-202ENST00000518098 RAPGEF6Q8TEU7 1601 aa10.07□□□□□ -0.8
LINCR-0001-202ENST00000518098 ILDR2Q71H61 639 aa10.07□□□□□ -0.8
LINCR-0001-202ENST00000518098 MLECQ14165 292 aa10.06□□□□□ -0.8
LINCR-0001-202ENST00000518098 PLCH2O75038 1416 aa10.06□□□□□ -0.8
LINCR-0001-202ENST00000518098 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 PLPPR3Q6T4P5 718 aa10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 ARHGEF12Q9NZN5 1544 aa10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 SCAPERQ9BY12 1400 aa10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
LINCR-0001-202ENST00000518098 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
LINCR-0001-202ENST00000518098 SPATA31D1Q6ZQQ2 1576 aa10.04□□□□□ -0.8
LINCR-0001-202ENST00000518098 RICTORQ6R327 1708 aa10.04□□□□□ -0.8
LINCR-0001-202ENST00000518098 EEA1Q15075 1411 aa10.03□□□□□ -0.8
LINCR-0001-202ENST00000518098 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
LINCR-0001-202ENST00000518098 ZNF518AQ6AHZ1 1483 aa10.03□□□□□ -0.8
LINCR-0001-202ENST00000518098 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
LINCR-0001-202ENST00000518098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINCR-0001-202ENST00000518098 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
LINCR-0001-202ENST00000518098 SETD1BQ9UPS6 1966 aaKnown RBP10□□□□□ -0.81
LINCR-0001-202ENST00000518098 HECW1Q76N89 1606 aa10□□□□□ -0.81
LINCR-0001-202ENST00000518098 FER1L4A9Z1Z3 1794 aa9.99□□□□□ -0.81
LINCR-0001-202ENST00000518098 PKD2Q13563 968 aa9.99□□□□□ -0.81
LINCR-0001-202ENST00000518098 REREQ9P2R6 1566 aa9.98□□□□□ -0.81
LINCR-0001-202ENST00000518098 NPATQ14207 1427 aa9.98□□□□□ -0.81
LINCR-0001-202ENST00000518098 AGLP35573 1532 aa9.97□□□□□ -0.81
LINCR-0001-202ENST00000518098 CEBPAP49715 358 aaPredicted RBP9.97□□□□□ -0.81
LINCR-0001-202ENST00000518098 CLIP1P30622 1438 aa9.97□□□□□ -0.81
LINCR-0001-202ENST00000518098 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
LINCR-0001-202ENST00000518098 PPP6R1Q9UPN7 881 aa9.96□□□□□ -0.82
LINCR-0001-202ENST00000518098 NCOA1Q15788 1441 aa9.96□□□□□ -0.82
LINCR-0001-202ENST00000518098 MLH3Q9UHC1 1453 aa9.96□□□□□ -0.82
LINCR-0001-202ENST00000518098 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
LINCR-0001-202ENST00000518098 FOXD1Q16676 465 aa9.95□□□□□ -0.82
LINCR-0001-202ENST00000518098 TOM1O60784 492 aa9.94□□□□□ -0.82
LINCR-0001-202ENST00000518098 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
LINCR-0001-202ENST00000518098 AFAP1Q8N556 730 aa9.92□□□□□ -0.82
LINCR-0001-202ENST00000518098 KDM5CP41229 1560 aa9.92□□□□□ -0.82
LINCR-0001-202ENST00000518098 PLA2R1Q13018 1463 aa9.91□□□□□ -0.82
LINCR-0001-202ENST00000518098 STRCQ7RTU9 1775 aa9.91□□□□□ -0.82
LINCR-0001-202ENST00000518098 ARHGAP5Q13017 1502 aa9.9□□□□□ -0.82
LINCR-0001-202ENST00000518098 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.83
LINCR-0001-202ENST00000518098 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
LINCR-0001-202ENST00000518098 KIF14Q15058 1648 aa9.89□□□□□ -0.83
LINCR-0001-202ENST00000518098 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
LINCR-0001-202ENST00000518098 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
LINCR-0001-202ENST00000518098 MYO5CQ9NQX4 1742 aa9.87□□□□□ -0.83
LINCR-0001-202ENST00000518098 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
LINCR-0001-202ENST00000518098 DIP2CQ9Y2E4 1556 aa9.86□□□□□ -0.83
LINCR-0001-202ENST00000518098 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
LINCR-0001-202ENST00000518098 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
LINCR-0001-202ENST00000518098 CPS1P31327 1500 aa9.85□□□□□ -0.83
LINCR-0001-202ENST00000518098 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
LINCR-0001-202ENST00000518098 ZNF335Q9H4Z2 1342 aaPredicted RBP9.84□□□□□ -0.83
LINCR-0001-202ENST00000518098 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
LINCR-0001-202ENST00000518098 PLEKHH2Q8IVE3 1493 aa9.84□□□□□ -0.83
LINCR-0001-202ENST00000518098 MROH2AA6NES4 1674 aa9.83□□□□□ -0.84
LINCR-0001-202ENST00000518098 C3P01024 1663 aa9.83□□□□□ -0.84
LINCR-0001-202ENST00000518098 SPAG9O60271 1321 aaKnown RBP9.83□□□□□ -0.84
LINCR-0001-202ENST00000518098 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
LINCR-0001-202ENST00000518098 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
LINCR-0001-202ENST00000518098 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-202ENST00000518098 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
LINCR-0001-202ENST00000518098 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-202ENST00000518098 THEMISQ8N1K5 641 aaPredicted RBP9.81□□□□□ -0.84
LINCR-0001-202ENST00000518098 HSPA1LP34931 641 aa9.8□□□□□ -0.84
LINCR-0001-202ENST00000518098 ANKLE2Q86XL3 938 aa9.8□□□□□ -0.84
LINCR-0001-202ENST00000518098 ABCC1P33527 1531 aa9.8□□□□□ -0.84
LINCR-0001-202ENST00000518098 PIP4K2BP78356 416 aa9.79□□□□□ -0.84
LINCR-0001-202ENST00000518098 ABCA6Q8N139 1617 aa9.78□□□□□ -0.84
LINCR-0001-202ENST00000518098 FAM135AQ9P2D6 1515 aa9.78□□□□□ -0.84
LINCR-0001-202ENST00000518098 A2ML1A8K2U0 1454 aa9.78□□□□□ -0.84
LINCR-0001-202ENST00000518098 MED1Q15648 1581 aaPredicted RBP9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 GGT6Q6P531 493 aa9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 SHANK2Q9UPX8 1470 aa9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.85
LINCR-0001-202ENST00000518098 A2MP01023 1474 aa9.76□□□□□ -0.85
LINCR-0001-202ENST00000518098 PREX2Q70Z35 1606 aa9.75□□□□□ -0.85
LINCR-0001-202ENST00000518098 CASKIN1Q8WXD9 1431 aa9.75□□□□□ -0.85
LINCR-0001-202ENST00000518098 CFDP1Q9UEE9 299 aaPredicted RBP9.75□□□□□ -0.85
LINCR-0001-202ENST00000518098 ARHGAP35Q9NRY4 1499 aa9.74□□□□□ -0.85
LINCR-0001-202ENST00000518098 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
LINCR-0001-202ENST00000518098 SAMD9LQ8IVG5 1584 aa9.74□□□□□ -0.85
LINCR-0001-202ENST00000518098 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
LINCR-0001-202ENST00000518098 NLRP1Q9C000 1473 aa9.73□□□□□ -0.85
LINCR-0001-202ENST00000518098 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
LINCR-0001-202ENST00000518098 MYO3AQ8NEV4 1616 aa9.73□□□□□ -0.85
LINCR-0001-202ENST00000518098 TNRQ92752 1358 aa9.73□□□□□ -0.85
LINCR-0001-202ENST00000518098 ITSN2Q9NZM3 1697 aa9.72□□□□□ -0.85
LINCR-0001-202ENST00000518098 MED14O60244 1454 aa9.72□□□□□ -0.85
LINCR-0001-202ENST00000518098 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
LINCR-0001-202ENST00000518098 PLXNC1O60486 1568 aa9.71□□□□□ -0.85
LINCR-0001-202ENST00000518098 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINCR-0001-202ENST00000518098 WASHC2CQ9Y4E1 1318 aa9.71□□□□□ -0.86
LINCR-0001-202ENST00000518098 DHX29Q7Z478 1369 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-202ENST00000518098 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
LINCR-0001-202ENST00000518098 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms