RNA–Protein interactions for RNA: ENST00000518093.1

SH2D4A-203, Transcript of SH2 domain containing 4A, humanhuman

TSL 4

Gene SH2D4A, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-203ENST00000518093 HOXB3P14651 431 aaPredicted RBP9.81□□□□□ -0.84
SH2D4A-203ENST00000518093 KIF3CO14782 793 aa9.8□□□□□ -0.84
SH2D4A-203ENST00000518093 POTEMA6NI47 508 aa9.78□□□□□ -0.84
SH2D4A-203ENST00000518093 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
SH2D4A-203ENST00000518093 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
SH2D4A-203ENST00000518093 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.75□□□□□ -0.85
SH2D4A-203ENST00000518093 DOK7Q18PE1 504 aa9.74□□□□□ -0.85
SH2D4A-203ENST00000518093 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
SH2D4A-203ENST00000518093 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
SH2D4A-203ENST00000518093 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
SH2D4A-203ENST00000518093 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
SH2D4A-203ENST00000518093 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
SH2D4A-203ENST00000518093 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
SH2D4A-203ENST00000518093 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
SH2D4A-203ENST00000518093 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
SH2D4A-203ENST00000518093 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
SH2D4A-203ENST00000518093 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
SH2D4A-203ENST00000518093 FOXK1P85037 733 aa9.68□□□□□ -0.86
SH2D4A-203ENST00000518093 DSG2Q14126 1118 aa9.68□□□□□ -0.86
SH2D4A-203ENST00000518093 CRISPLD2Q9H0B8 497 aa9.68□□□□□ -0.86
SH2D4A-203ENST00000518093 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
SH2D4A-203ENST00000518093 PDE4AP27815 886 aa9.66□□□□□ -0.86
SH2D4A-203ENST00000518093 EMP3P54852 163 aa9.66□□□□□ -0.86
SH2D4A-203ENST00000518093 ARSIQ5FYB1 569 aa9.66□□□□□ -0.86
SH2D4A-203ENST00000518093 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
SH2D4A-203ENST00000518093 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.86
SH2D4A-203ENST00000518093 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
SH2D4A-203ENST00000518093 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
SH2D4A-203ENST00000518093 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
SH2D4A-203ENST00000518093 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
SH2D4A-203ENST00000518093 SLC34A2O95436 690 aa9.62□□□□□ -0.87
SH2D4A-203ENST00000518093 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
SH2D4A-203ENST00000518093 PPP1R15BQ5SWA1 713 aa9.61□□□□□ -0.87
SH2D4A-203ENST00000518093 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
SH2D4A-203ENST00000518093 CDAN1Q8IWY9 1227 aa9.59□□□□□ -0.87
SH2D4A-203ENST00000518093 DDX27Q96GQ7 796 aaKnown RBP9.59□□□□□ -0.87
SH2D4A-203ENST00000518093 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
SH2D4A-203ENST00000518093 ERBB3P21860 1342 aa9.58□□□□□ -0.88
SH2D4A-203ENST00000518093 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
SH2D4A-203ENST00000518093 NUDT7P0C024 238 aa9.57□□□□□ -0.88
SH2D4A-203ENST00000518093 MFSD10Q14728 455 aa9.57□□□□□ -0.88
SH2D4A-203ENST00000518093 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
SH2D4A-203ENST00000518093 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
SH2D4A-203ENST00000518093 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
SH2D4A-203ENST00000518093 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
SH2D4A-203ENST00000518093 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
SH2D4A-203ENST00000518093 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
SH2D4A-203ENST00000518093 TBC1D12O60347 775 aa9.52□□□□□ -0.89
SH2D4A-203ENST00000518093 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
SH2D4A-203ENST00000518093 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
SH2D4A-203ENST00000518093 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
SH2D4A-203ENST00000518093 PLCB2Q00722 1185 aa9.46□□□□□ -0.9
SH2D4A-203ENST00000518093 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
SH2D4A-203ENST00000518093 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
SH2D4A-203ENST00000518093 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
SH2D4A-203ENST00000518093 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
SH2D4A-203ENST00000518093 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
SH2D4A-203ENST00000518093 EVI5O60447 810 aa9.43□□□□□ -0.9
SH2D4A-203ENST00000518093 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
SH2D4A-203ENST00000518093 WDR70Q9NW82 654 aa9.43□□□□□ -0.9
SH2D4A-203ENST00000518093 DPYSL4O14531 572 aa9.4□□□□□ -0.9
SH2D4A-203ENST00000518093 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
SH2D4A-203ENST00000518093 E2F4Q16254 413 aa9.39□□□□□ -0.91
SH2D4A-203ENST00000518093 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
SH2D4A-203ENST00000518093 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
SH2D4A-203ENST00000518093 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
SH2D4A-203ENST00000518093 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
SH2D4A-203ENST00000518093 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
SH2D4A-203ENST00000518093 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
SH2D4A-203ENST00000518093 FOSBP53539 338 aa9.34□□□□□ -0.91
SH2D4A-203ENST00000518093 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
SH2D4A-203ENST00000518093 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
SH2D4A-203ENST00000518093 PBX2P40425 430 aa9.32□□□□□ -0.92
SH2D4A-203ENST00000518093 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
SH2D4A-203ENST00000518093 PSEN2P49810 448 aa9.31□□□□□ -0.92
SH2D4A-203ENST00000518093 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
SH2D4A-203ENST00000518093 JPH4Q96JJ6 628 aa9.31□□□□□ -0.92
SH2D4A-203ENST00000518093 PCDHGA10Q9Y5H3 936 aa9.3□□□□□ -0.92
SH2D4A-203ENST00000518093 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
SH2D4A-203ENST00000518093 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-203ENST00000518093 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 PDIA6Q15084 440 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 DDX12PQ92771 950 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 ADAM33Q9BZ11 813 aa9.28□□□□□ -0.92
SH2D4A-203ENST00000518093 SPDYE16A6NNV3 312 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-203ENST00000518093 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
SH2D4A-203ENST00000518093 PHF14O94880 888 aa9.26□□□□□ -0.93
SH2D4A-203ENST00000518093 PTGER2P43116 358 aa9.26□□□□□ -0.93
SH2D4A-203ENST00000518093 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
SH2D4A-203ENST00000518093 TYW1BQ6NUM6 668 aa9.25□□□□□ -0.93
SH2D4A-203ENST00000518093 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
SH2D4A-203ENST00000518093 PTPREP23469 700 aa9.24□□□□□ -0.93
SH2D4A-203ENST00000518093 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
SH2D4A-203ENST00000518093 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
SH2D4A-203ENST00000518093 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
SH2D4A-203ENST00000518093 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
SH2D4A-203ENST00000518093 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
SH2D4A-203ENST00000518093 EPAS1Q99814 870 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms