RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
CDH12-203ENST00000517378 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
CDH12-203ENST00000517378 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
CDH12-203ENST00000517378 ANKRD30BQ9BXX2 1392 aa9.34□□□□□ -0.91
CDH12-203ENST00000517378 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
CDH12-203ENST00000517378 WASHC2AQ641Q2 1341 aa9.34□□□□□ -0.91
CDH12-203ENST00000517378 FKBP8Q14318 412 aa9.33□□□□□ -0.92
CDH12-203ENST00000517378 MPHOSPH9Q99550 1183 aa9.33□□□□□ -0.92
CDH12-203ENST00000517378 ADGRL2O95490 1459 aa9.33□□□□□ -0.92
CDH12-203ENST00000517378 HSPA5P11021 654 aaKnown RBP9.32□□□□□ -0.92
CDH12-203ENST00000517378 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
CDH12-203ENST00000517378 MBD5Q9P267 1494 aa9.32□□□□□ -0.92
CDH12-203ENST00000517378 SPATA31E1Q6ZUB1 1445 aa9.32□□□□□ -0.92
CDH12-203ENST00000517378 NEFLP07196 543 aa9.31□□□□□ -0.92
CDH12-203ENST00000517378 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
CDH12-203ENST00000517378 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
CDH12-203ENST00000517378 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
CDH12-203ENST00000517378 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDH12-203ENST00000517378 PZPP20742 1482 aa9.3□□□□□ -0.92
CDH12-203ENST00000517378 CEP170Q5SW79 1584 aa9.3□□□□□ -0.92
CDH12-203ENST00000517378 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
CDH12-203ENST00000517378 CCDC7Q96M83 1385 aa9.29□□□□□ -0.92
CDH12-203ENST00000517378 L3MBTL2Q969R5 705 aa9.29□□□□□ -0.92
CDH12-203ENST00000517378 PHF23Q9BUL5 403 aaPredicted RBP9.29□□□□□ -0.92
CDH12-203ENST00000517378 KIF14Q15058 1648 aa9.28□□□□□ -0.92
CDH12-203ENST00000517378 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
CDH12-203ENST00000517378 SYNJ2O15056 1496 aa9.27□□□□□ -0.92
CDH12-203ENST00000517378 SHANK2Q9UPX8 1470 aa9.27□□□□□ -0.93
CDH12-203ENST00000517378 CDK11AQ9UQ88 783 aaPredicted RBP9.27□□□□□ -0.93
CDH12-203ENST00000517378 BCANQ96GW7 911 aa9.26□□□□□ -0.93
CDH12-203ENST00000517378 CDC42BPAQ5VT25 1732 aa9.26□□□□□ -0.93
CDH12-203ENST00000517378 KDM5DQ9BY66 1539 aa9.26□□□□□ -0.93
CDH12-203ENST00000517378 NUP160Q12769 1436 aa9.26□□□□□ -0.93
CDH12-203ENST00000517378 PRG4Q92954 1404 aaPredicted RBP9.25□□□□□ -0.93
CDH12-203ENST00000517378 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
CDH12-203ENST00000517378 ABCA8O94911 1581 aa9.25□□□□□ -0.93
CDH12-203ENST00000517378 ERICH6BQ5W0A0 696 aa9.25□□□□□ -0.93
CDH12-203ENST00000517378 KDM5CP41229 1560 aa9.24□□□□□ -0.93
CDH12-203ENST00000517378 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
CDH12-203ENST00000517378 PLB1Q6P1J6 1458 aa9.24□□□□□ -0.93
CDH12-203ENST00000517378 ZNF644Q9H582 1327 aaPredicted RBP9.24□□□□□ -0.93
CDH12-203ENST00000517378 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
CDH12-203ENST00000517378 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH12-203ENST00000517378 PRKRIP1Q9H875 184 aaPredicted RBP9.23□□□□□ -0.93
CDH12-203ENST00000517378 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 ABCC10Q5T3U5 1492 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 UHRF1BP1Q6BDS2 1440 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 BCORL1Q5H9F3 1711 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 FOXD1Q16676 465 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 ANP32EQ9BTT0 268 aa9.23□□□□□ -0.93
CDH12-203ENST00000517378 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
CDH12-203ENST00000517378 ARHGEF5Q12774 1597 aa9.22□□□□□ -0.93
CDH12-203ENST00000517378 SLC4A1APQ9BWU0 796 aaKnown RBP9.22□□□□□ -0.93
CDH12-203ENST00000517378 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
CDH12-203ENST00000517378 ZBED9Q6R2W3 1325 aa9.21□□□□□ -0.93
CDH12-203ENST00000517378 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.93
CDH12-203ENST00000517378 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
CDH12-203ENST00000517378 ARID4BQ4LE39 1312 aaPredicted RBP9.2□□□□□ -0.94
CDH12-203ENST00000517378 DHX29Q7Z478 1369 aaKnown RBP9.2□□□□□ -0.94
CDH12-203ENST00000517378 ARID3CA6NKF2 412 aa9.2□□□□□ -0.94
CDH12-203ENST00000517378 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
CDH12-203ENST00000517378 PTPRGP23470 1445 aa9.19□□□□□ -0.94
CDH12-203ENST00000517378 CFDP1Q9UEE9 299 aaPredicted RBP9.19□□□□□ -0.94
CDH12-203ENST00000517378 ANKRD50Q9ULJ7 1429 aa9.19□□□□□ -0.94
CDH12-203ENST00000517378 CCDC184Q52MB2 194 aa9.19□□□□□ -0.94
CDH12-203ENST00000517378 E9PCH4 1651 aa9.19□□□□□ -0.94
CDH12-203ENST00000517378 C9orf84Q5VXU9 1444 aa9.17□□□□□ -0.94
CDH12-203ENST00000517378 USP47Q96K76 1375 aa9.17□□□□□ -0.94
CDH12-203ENST00000517378 PREX2Q70Z35 1606 aa9.17□□□□□ -0.94
CDH12-203ENST00000517378 ATP10BO94823 1461 aa9.17□□□□□ -0.94
CDH12-203ENST00000517378 MRS2Q9HD23 443 aa9.16□□□□□ -0.94
CDH12-203ENST00000517378 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
CDH12-203ENST00000517378 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
CDH12-203ENST00000517378 SMG6Q86US8 1419 aaKnown RBP9.15□□□□□ -0.94
CDH12-203ENST00000517378 MAST1Q9Y2H9 1570 aa9.15□□□□□ -0.94
CDH12-203ENST00000517378 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
CDH12-203ENST00000517378 CDC42BPBQ9Y5S2 1711 aa9.15□□□□□ -0.95
CDH12-203ENST00000517378 FANCIQ9NVI1 1328 aa9.15□□□□□ -0.95
CDH12-203ENST00000517378 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
CDH12-203ENST00000517378 UNC13BO14795 1591 aa9.14□□□□□ -0.95
CDH12-203ENST00000517378 SAMD9LQ8IVG5 1584 aa9.14□□□□□ -0.95
CDH12-203ENST00000517378 LAMC1P11047 1609 aa9.14□□□□□ -0.95
CDH12-203ENST00000517378 PKD2Q13563 968 aa9.13□□□□□ -0.95
CDH12-203ENST00000517378 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
CDH12-203ENST00000517378 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
CDH12-203ENST00000517378 CCDC141Q6ZP82 1450 aa9.12□□□□□ -0.95
CDH12-203ENST00000517378 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
CDH12-203ENST00000517378 FAM135AQ9P2D6 1515 aa9.12□□□□□ -0.95
CDH12-203ENST00000517378 RNF123Q5XPI4 1314 aa9.12□□□□□ -0.95
CDH12-203ENST00000517378 FAM9BQ8IZU0 186 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 NUP155O75694 1391 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 PLEKHD1A6NEE1 506 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 KIF15Q9NS87 1388 aa9.11□□□□□ -0.95
CDH12-203ENST00000517378 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
CDH12-203ENST00000517378 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
CDH12-203ENST00000517378 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
CDH12-203ENST00000517378 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
CDH12-203ENST00000517378 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms