RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 BBXQ8WY36 941 aaPredicted RBP8□□□□□ -1.13
RNU1-54P-201ENST00000517181 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
RNU1-54P-201ENST00000517181 POTEMA6NI47 508 aa7.97□□□□□ -1.13
RNU1-54P-201ENST00000517181 POTEGQ6S5H5 508 aa7.97□□□□□ -1.13
RNU1-54P-201ENST00000517181 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
RNU1-54P-201ENST00000517181 GPHNQ9NQX3 736 aaPredicted RBP7.94□□□□□ -1.14
RNU1-54P-201ENST00000517181 CRISPLD2Q9H0B8 497 aa7.93□□□□□ -1.14
RNU1-54P-201ENST00000517181 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
RNU1-54P-201ENST00000517181 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
RNU1-54P-201ENST00000517181 SLC34A2O95436 690 aa7.91□□□□□ -1.14
RNU1-54P-201ENST00000517181 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
RNU1-54P-201ENST00000517181 FOXK1P85037 733 aa7.91□□□□□ -1.14
RNU1-54P-201ENST00000517181 NCKAP5LQ9HCH0 1330 aa7.91□□□□□ -1.14
RNU1-54P-201ENST00000517181 GPR153Q6NV75 609 aa7.9□□□□□ -1.14
RNU1-54P-201ENST00000517181 DSG2Q14126 1118 aa7.88□□□□□ -1.15
RNU1-54P-201ENST00000517181 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
RNU1-54P-201ENST00000517181 RIMBP2O15034 1052 aa7.87□□□□□ -1.15
RNU1-54P-201ENST00000517181 CADPS2Q86UW7 1296 aa7.87□□□□□ -1.15
RNU1-54P-201ENST00000517181 ZNF710Q8N1W2 664 aa7.87□□□□□ -1.15
RNU1-54P-201ENST00000517181 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.87□□□□□ -1.15
RNU1-54P-201ENST00000517181 PCDH10Q9P2E7 1040 aa7.87□□□□□ -1.15
RNU1-54P-201ENST00000517181 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
RNU1-54P-201ENST00000517181 POTEB3A0JP26 581 aa7.85□□□□□ -1.15
RNU1-54P-201ENST00000517181 EMP3P54852 163 aa7.85□□□□□ -1.15
RNU1-54P-201ENST00000517181 MFSD10Q14728 455 aa7.85□□□□□ -1.15
RNU1-54P-201ENST00000517181 POTEBQ6S5H4 581 aa7.85□□□□□ -1.15
RNU1-54P-201ENST00000517181 PLPP6Q8IY26 295 aa7.85□□□□□ -1.15
RNU1-54P-201ENST00000517181 PDE4AP27815 886 aa7.84□□□□□ -1.15
RNU1-54P-201ENST00000517181 PTCD2Q8WV60 388 aaKnown RBP7.84□□□□□ -1.15
RNU1-54P-201ENST00000517181 KDM4FA0A1W2PPD8 638 aa7.83□□□□□ -1.16
RNU1-54P-201ENST00000517181 ARSIQ5FYB1 569 aa7.83□□□□□ -1.16
RNU1-54P-201ENST00000517181 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
RNU1-54P-201ENST00000517181 PCDHGA4Q9Y5G9 962 aa7.82□□□□□ -1.16
RNU1-54P-201ENST00000517181 PAXIP1Q6ZW49 1069 aaPredicted RBP7.81□□□□□ -1.16
RNU1-54P-201ENST00000517181 KHSRPQ92945 711 aaKnown RBP eCLIP7.81□□□□□ -1.16
RNU1-54P-201ENST00000517181 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
RNU1-54P-201ENST00000517181 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
RNU1-54P-201ENST00000517181 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
RNU1-54P-201ENST00000517181 FAM205CA6NFA0 338 aa7.79□□□□□ -1.16
RNU1-54P-201ENST00000517181 OXER1Q8TDS5 423 aa7.79□□□□□ -1.16
RNU1-54P-201ENST00000517181 DDX27Q96GQ7 796 aaKnown RBP7.79□□□□□ -1.16
RNU1-54P-201ENST00000517181 CFAP44Q96MT7 982 aa7.77□□□□□ -1.17
RNU1-54P-201ENST00000517181 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
RNU1-54P-201ENST00000517181 NUDT7P0C024 238 aa7.76□□□□□ -1.17
RNU1-54P-201ENST00000517181 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
RNU1-54P-201ENST00000517181 ERBB3P21860 1342 aa7.76□□□□□ -1.17
RNU1-54P-201ENST00000517181 VARS2Q5ST30 1063 aaKnown RBP7.75□□□□□ -1.17
RNU1-54P-201ENST00000517181 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
RNU1-54P-201ENST00000517181 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
RNU1-54P-201ENST00000517181 PLSCR2Q9NRY7 297 aa7.74□□□□□ -1.17
RNU1-54P-201ENST00000517181 EMILIN3Q9NT22 766 aa7.74□□□□□ -1.17
RNU1-54P-201ENST00000517181 LHX6Q9UPM6 363 aa7.73□□□□□ -1.17
RNU1-54P-201ENST00000517181 TBC1D12O60347 775 aa7.72□□□□□ -1.17
RNU1-54P-201ENST00000517181 ZNF687Q8N1G0 1237 aa7.72□□□□□ -1.17
RNU1-54P-201ENST00000517181 UPF1Q92900 1129 aaKnown RBP eCLIP7.7□□□□□ -1.18
RNU1-54P-201ENST00000517181 ANO8Q9HCE9 1232 aaPredicted RBP7.7□□□□□ -1.18
RNU1-54P-201ENST00000517181 TSHZ2Q9NRE2 1034 aa7.69□□□□□ -1.18
RNU1-54P-201ENST00000517181 PSDA5PKW4 1024 aaPredicted RBP7.67□□□□□ -1.18
RNU1-54P-201ENST00000517181 PLCB2Q00722 1185 aa7.67□□□□□ -1.18
RNU1-54P-201ENST00000517181 POTEEQ6S8J3 1075 aa7.67□□□□□ -1.18
RNU1-54P-201ENST00000517181 ARIH1Q9Y4X5 557 aaPredicted RBP7.66□□□□□ -1.18
RNU1-54P-201ENST00000517181 EVI5O60447 810 aa7.65□□□□□ -1.18
RNU1-54P-201ENST00000517181 PBX2P40425 430 aa7.64□□□□□ -1.19
RNU1-54P-201ENST00000517181 FOSBP53539 338 aa7.63□□□□□ -1.19
RNU1-54P-201ENST00000517181 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
RNU1-54P-201ENST00000517181 SPNS2Q8IVW8 549 aa7.63□□□□□ -1.19
RNU1-54P-201ENST00000517181 DPYSL4O14531 572 aa7.62□□□□□ -1.19
RNU1-54P-201ENST00000517181 E2F4Q16254 413 aa7.62□□□□□ -1.19
RNU1-54P-201ENST00000517181 JPH4Q96JJ6 628 aa7.62□□□□□ -1.19
RNU1-54P-201ENST00000517181 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
RNU1-54P-201ENST00000517181 LSM11P83369 360 aaKnown RBP eCLIP7.6□□□□□ -1.19
RNU1-54P-201ENST00000517181 PDIA6Q15084 440 aa7.6□□□□□ -1.19
RNU1-54P-201ENST00000517181 PTGER2P43116 358 aa7.59□□□□□ -1.19
RNU1-54P-201ENST00000517181 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
RNU1-54P-201ENST00000517181 WDR70Q9NW82 654 aa7.59□□□□□ -1.19
RNU1-54P-201ENST00000517181 ARHGAP33O14559 1287 aa7.58□□□□□ -1.2
RNU1-54P-201ENST00000517181 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
RNU1-54P-201ENST00000517181 AXIN2Q9Y2T1 843 aa7.58□□□□□ -1.2
RNU1-54P-201ENST00000517181 MMRN1Q13201 1228 aa7.57□□□□□ -1.2
RNU1-54P-201ENST00000517181 PCDHGA10Q9Y5H3 936 aa7.57□□□□□ -1.2
RNU1-54P-201ENST00000517181 SPDYE16A6NNV3 312 aaPredicted RBP7.56□□□□□ -1.2
RNU1-54P-201ENST00000517181 PHF14O94880 888 aa7.55□□□□□ -1.2
RNU1-54P-201ENST00000517181 ZDHHC16Q969W1 377 aa7.55□□□□□ -1.2
RNU1-54P-201ENST00000517181 PSEN2P49810 448 aa7.54□□□□□ -1.2
RNU1-54P-201ENST00000517181 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
RNU1-54P-201ENST00000517181 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
RNU1-54P-201ENST00000517181 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
RNU1-54P-201ENST00000517181 TK2O00142 265 aa7.53□□□□□ -1.2
RNU1-54P-201ENST00000517181 FBXW7Q969H0 707 aa7.53□□□□□ -1.2
RNU1-54P-201ENST00000517181 TYW1BQ6NUM6 668 aa7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 KCNK17Q96T54 332 aa7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 EPAS1Q99814 870 aa7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 SLC4A5Q9BY07 1137 aa7.52□□□□□ -1.21
RNU1-54P-201ENST00000517181 HRO43593 1189 aa7.51□□□□□ -1.21
RNU1-54P-201ENST00000517181 ADGRD1Q6QNK2 874 aa7.51□□□□□ -1.21
RNU1-54P-201ENST00000517181 PTPREP23469 700 aa7.5□□□□□ -1.21
RNU1-54P-201ENST00000517181 DDX12PQ92771 950 aa7.49□□□□□ -1.21
RNU1-54P-201ENST00000517181 KDM2AQ9Y2K7 1162 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms