RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RGS12O14924 1447 aa6.93□□□□□ -1.3
SCARNA13-201ENST00000516672 ARHGEF40Q8TER5 1519 aa6.93□□□□□ -1.3
SCARNA13-201ENST00000516672 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
SCARNA13-201ENST00000516672 SIGLEC1Q9BZZ2 1709 aa6.93□□□□□ -1.3
SCARNA13-201ENST00000516672 HRCP23327 699 aa6.92□□□□□ -1.3
SCARNA13-201ENST00000516672 WIZO95785 1651 aa6.91□□□□□ -1.3
SCARNA13-201ENST00000516672 PTPRGP23470 1445 aa6.91□□□□□ -1.3
SCARNA13-201ENST00000516672 SETD1BQ9UPS6 1966 aaKnown RBP6.9□□□□□ -1.3
SCARNA13-201ENST00000516672 DCAF8L1A6NGE4 600 aa6.9□□□□□ -1.3
SCARNA13-201ENST00000516672 GIGYF1O75420 1035 aaPredicted RBP6.9□□□□□ -1.3
SCARNA13-201ENST00000516672 FRMPD1Q5SYB0 1578 aa6.9□□□□□ -1.31
SCARNA13-201ENST00000516672 PSDA5PKW4 1024 aaPredicted RBP6.89□□□□□ -1.31
SCARNA13-201ENST00000516672 EHMT2Q96KQ7 1210 aa6.89□□□□□ -1.31
SCARNA13-201ENST00000516672 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
SCARNA13-201ENST00000516672 RUSC2Q8N2Y8 1516 aa6.89□□□□□ -1.31
SCARNA13-201ENST00000516672 ABCA5Q8WWZ7 1642 aa6.89□□□□□ -1.31
SCARNA13-201ENST00000516672 ARHGEF12Q9NZN5 1544 aa6.88□□□□□ -1.31
SCARNA13-201ENST00000516672 UHRF1BP1LA0JNW5 1464 aa6.87□□□□□ -1.31
SCARNA13-201ENST00000516672 WDR7Q9Y4E6 1490 aa6.87□□□□□ -1.31
SCARNA13-201ENST00000516672 PKD2Q13563 968 aa6.87□□□□□ -1.31
SCARNA13-201ENST00000516672 MEX3CQ5U5Q3 659 aaKnown RBP6.87□□□□□ -1.31
SCARNA13-201ENST00000516672 ZCCHC11Q5TAX3 1644 aaKnown RBP6.86□□□□□ -1.31
SCARNA13-201ENST00000516672 KDM5BQ9UGL1 1544 aa6.86□□□□□ -1.31
SCARNA13-201ENST00000516672 FHAD1B1AJZ9 1412 aa6.85□□□□□ -1.31
SCARNA13-201ENST00000516672 AKNAQ7Z591 1439 aa6.85□□□□□ -1.31
SCARNA13-201ENST00000516672 LRP6O75581 1613 aa6.84□□□□□ -1.31
SCARNA13-201ENST00000516672 RNF17Q9BXT8 1623 aaKnown RBP6.84□□□□□ -1.31
SCARNA13-201ENST00000516672 CCDC125Q86Z20 511 aa6.84□□□□□ -1.31
SCARNA13-201ENST00000516672 KCNH8Q96L42 1107 aa6.84□□□□□ -1.31
SCARNA13-201ENST00000516672 BCL9LQ86UU0 1499 aa6.84□□□□□ -1.31
SCARNA13-201ENST00000516672 TCOF1Q13428 1488 aaKnown RBP6.83□□□□□ -1.32
SCARNA13-201ENST00000516672 TRAPPC8Q9Y2L5 1435 aa6.83□□□□□ -1.32
SCARNA13-201ENST00000516672 PHLDB1Q86UU1 1377 aa6.82□□□□□ -1.32
SCARNA13-201ENST00000516672 PLA2R1Q13018 1463 aa6.81□□□□□ -1.32
SCARNA13-201ENST00000516672 UACAQ9BZF9 1416 aa6.81□□□□□ -1.32
SCARNA13-201ENST00000516672 TNS2Q63HR2 1409 aa6.8□□□□□ -1.32
SCARNA13-201ENST00000516672 C3P01024 1663 aa6.8□□□□□ -1.32
SCARNA13-201ENST00000516672 JCADQ9P266 1359 aa6.8□□□□□ -1.32
SCARNA13-201ENST00000516672 RAPGEF2Q9Y4G8 1499 aa6.79□□□□□ -1.32
SCARNA13-201ENST00000516672 FAM135BQ49AJ0 1406 aa6.79□□□□□ -1.32
SCARNA13-201ENST00000516672 RBM6P78332 1123 aaKnown RBP6.79□□□□□ -1.32
SCARNA13-201ENST00000516672 FAM161AQ3B820 660 aa6.79□□□□□ -1.32
SCARNA13-201ENST00000516672 WWC3Q9ULE0 1092 aa6.79□□□□□ -1.32
SCARNA13-201ENST00000516672 CAMTA1Q9Y6Y1 1673 aa6.78□□□□□ -1.32
SCARNA13-201ENST00000516672 HSPA6P17066 643 aa6.78□□□□□ -1.32
SCARNA13-201ENST00000516672 DEFB132Q7Z7B7 95 aa6.78□□□□□ -1.32
SCARNA13-201ENST00000516672 MPNDQ8N594 471 aa6.78□□□□□ -1.32
SCARNA13-201ENST00000516672 TNIKQ9UKE5 1360 aa6.78□□□□□ -1.32
SCARNA13-201ENST00000516672 EP400Q96L91 3159 aa6.77□□□□□ -1.33
SCARNA13-201ENST00000516672 NWD1Q149M9 1564 aa6.77□□□□□ -1.33
SCARNA13-201ENST00000516672 VWDEQ8N2E2 1590 aa6.77□□□□□ -1.33
SCARNA13-201ENST00000516672 ZFYVE16Q7Z3T8 1539 aa6.76□□□□□ -1.33
SCARNA13-201ENST00000516672 ABCA10Q8WWZ4 1543 aa6.76□□□□□ -1.33
SCARNA13-201ENST00000516672 AFF2P51816 1311 aa6.76□□□□□ -1.33
SCARNA13-201ENST00000516672 QTRT2Q9H974 415 aaKnown RBP6.74□□□□□ -1.33
SCARNA13-201ENST00000516672 CDK13Q14004 1512 aaKnown RBP6.74□□□□□ -1.33
SCARNA13-201ENST00000516672 UTRNP46939 3433 aa6.74□□□□□ -1.33
SCARNA13-201ENST00000516672 SPATA31A6Q5VVP1 1343 aa6.74□□□□□ -1.33
SCARNA13-201ENST00000516672 NEO1Q92859 1461 aa6.73□□□□□ -1.33
SCARNA13-201ENST00000516672 EFCAB5A4FU69 1503 aa6.73□□□□□ -1.33
SCARNA13-201ENST00000516672 SUPT6HQ7KZ85 1726 aaKnown RBP6.73□□□□□ -1.33
SCARNA13-201ENST00000516672 ROBO1Q9Y6N7 1651 aa6.72□□□□□ -1.33
SCARNA13-201ENST00000516672 RICTORQ6R327 1708 aa6.71□□□□□ -1.34
SCARNA13-201ENST00000516672 RTEL1-TNFRSF6BF6WH68 1400 aa6.71□□□□□ -1.34
SCARNA13-201ENST00000516672 BLMP54132 1417 aaPredicted RBP6.71□□□□□ -1.34
SCARNA13-201ENST00000516672 R3HDM1Q15032 1099 aaKnown RBP6.71□□□□□ -1.34
SCARNA13-201ENST00000516672 NGLY1Q96IV0 654 aa6.71□□□□□ -1.34
SCARNA13-201ENST00000516672 DENND4BO75064 1496 aaPredicted RBP6.7□□□□□ -1.34
SCARNA13-201ENST00000516672 TOP2AP11388 1531 aaKnown RBP6.7□□□□□ -1.34
SCARNA13-201ENST00000516672 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
SCARNA13-201ENST00000516672 SYNMO15061 1565 aa6.69□□□□□ -1.34
SCARNA13-201ENST00000516672 ABCA8O94911 1581 aa6.69□□□□□ -1.34
SCARNA13-201ENST00000516672 KDM5CP41229 1560 aa6.69□□□□□ -1.34
SCARNA13-201ENST00000516672 NEURL4Q96JN8 1562 aa6.69□□□□□ -1.34
SCARNA13-201ENST00000516672 NINLQ9Y2I6 1382 aa6.69□□□□□ -1.34
SCARNA13-201ENST00000516672 FHOD3Q2V2M9 1422 aa6.68□□□□□ -1.34
SCARNA13-201ENST00000516672 STRCP1A6NGW2 1772 aa6.68□□□□□ -1.34
SCARNA13-201ENST00000516672 ZMYM4Q5VZL5 1548 aa6.68□□□□□ -1.34
SCARNA13-201ENST00000516672 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
SCARNA13-201ENST00000516672 ZNF142P52746 1687 aaPredicted RBP6.68□□□□□ -1.34
SCARNA13-201ENST00000516672 SCAF11Q99590 1463 aaKnown RBP6.67□□□□□ -1.34
SCARNA13-201ENST00000516672 SF3B2Q13435 895 aaKnown RBP6.67□□□□□ -1.34
SCARNA13-201ENST00000516672 DNAJC5GQ8N7S2 189 aa6.67□□□□□ -1.34
SCARNA13-201ENST00000516672 CARMIL2Q6F5E8 1435 aa6.67□□□□□ -1.34
SCARNA13-201ENST00000516672 CEP170BQ9Y4F5 1589 aaPredicted RBP6.66□□□□□ -1.34
SCARNA13-201ENST00000516672 CHD4Q14839 1912 aa6.66□□□□□ -1.34
SCARNA13-201ENST00000516672 CCDC88BA6NC98 1476 aa6.66□□□□□ -1.34
SCARNA13-201ENST00000516672 POLR1AO95602 1720 aaPredicted RBP6.65□□□□□ -1.34
SCARNA13-201ENST00000516672 ESF1Q9H501 851 aaKnown RBP6.65□□□□□ -1.34
SCARNA13-201ENST00000516672 AATKQ6ZMQ8 1374 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 NPATQ14207 1427 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 C9orf84Q5VXU9 1444 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 ATP10AO60312 1499 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 MAGI2Q86UL8 1455 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 ERICH3Q5RHP9 1530 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 MYO3AQ8NEV4 1616 aa6.65□□□□□ -1.35
SCARNA13-201ENST00000516672 COL16A1Q07092 1604 aaPredicted RBP6.63□□□□□ -1.35
SCARNA13-201ENST00000516672 FGD6Q6ZV73 1430 aa6.63□□□□□ -1.35
SCARNA13-201ENST00000516672 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
SCARNA13-201ENST00000516672 ABCA9Q8IUA7 1624 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms