RNA–Protein interactions for RNA: ENST00000515860.1

LINC00500-201, long intergenic non-protein coding RNA 500, humanhuman

TSL 4 BASIC

Gene LINC00500, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00500-201ENST00000515860 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
LINC00500-201ENST00000515860 ST18O60284 1047 aa12.94□□□□□ -0.34
LINC00500-201ENST00000515860 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
LINC00500-201ENST00000515860 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
LINC00500-201ENST00000515860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00500-201ENST00000515860 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
LINC00500-201ENST00000515860 SNPHO15079 494 aa12.88□□□□□ -0.35
LINC00500-201ENST00000515860 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
LINC00500-201ENST00000515860 WDR70Q9NW82 654 aa12.85□□□□□ -0.35
LINC00500-201ENST00000515860 NBR1Q14596 966 aa12.8□□□□□ -0.36
LINC00500-201ENST00000515860 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
LINC00500-201ENST00000515860 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
LINC00500-201ENST00000515860 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
LINC00500-201ENST00000515860 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
LINC00500-201ENST00000515860 PDE4AP27815 886 aa12.76□□□□□ -0.37
LINC00500-201ENST00000515860 DPY19L2Q6NUT2 758 aa12.76□□□□□ -0.37
LINC00500-201ENST00000515860 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
LINC00500-201ENST00000515860 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
LINC00500-201ENST00000515860 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
LINC00500-201ENST00000515860 MARVELD3Q96A59 401 aa12.72□□□□□ -0.37
LINC00500-201ENST00000515860 LARP6Q9BRS8 491 aaKnown RBP12.71□□□□□ -0.37
LINC00500-201ENST00000515860 MFSD10Q14728 455 aa12.7□□□□□ -0.38
LINC00500-201ENST00000515860 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
LINC00500-201ENST00000515860 E2F4Q16254 413 aa12.69□□□□□ -0.38
LINC00500-201ENST00000515860 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
LINC00500-201ENST00000515860 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
LINC00500-201ENST00000515860 G3V3G9 751 aa12.65□□□□□ -0.38
LINC00500-201ENST00000515860 EMP3P54852 163 aa12.65□□□□□ -0.38
LINC00500-201ENST00000515860 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
LINC00500-201ENST00000515860 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
LINC00500-201ENST00000515860 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
LINC00500-201ENST00000515860 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
LINC00500-201ENST00000515860 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
LINC00500-201ENST00000515860 TMC2Q8TDI7 906 aa12.58□□□□□ -0.4
LINC00500-201ENST00000515860 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
LINC00500-201ENST00000515860 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
LINC00500-201ENST00000515860 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
LINC00500-201ENST00000515860 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
LINC00500-201ENST00000515860 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
LINC00500-201ENST00000515860 FOXK1P85037 733 aa12.53□□□□□ -0.4
LINC00500-201ENST00000515860 DSG2Q14126 1118 aa12.53□□□□□ -0.4
LINC00500-201ENST00000515860 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
LINC00500-201ENST00000515860 KIF3CO14782 793 aa12.52□□□□□ -0.41
LINC00500-201ENST00000515860 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
LINC00500-201ENST00000515860 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
LINC00500-201ENST00000515860 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
LINC00500-201ENST00000515860 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
LINC00500-201ENST00000515860 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
LINC00500-201ENST00000515860 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
LINC00500-201ENST00000515860 KRTAP3-3Q9BYR6 98 aa12.45□□□□□ -0.42
LINC00500-201ENST00000515860 KRTAP3-2Q9BYR7 98 aa12.45□□□□□ -0.42
LINC00500-201ENST00000515860 SEMA3EO15041 775 aa12.44□□□□□ -0.42
LINC00500-201ENST00000515860 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
LINC00500-201ENST00000515860 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
LINC00500-201ENST00000515860 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
LINC00500-201ENST00000515860 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
LINC00500-201ENST00000515860 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
LINC00500-201ENST00000515860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00500-201ENST00000515860 DPYSL4O14531 572 aa12.39□□□□□ -0.43
LINC00500-201ENST00000515860 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
LINC00500-201ENST00000515860 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
LINC00500-201ENST00000515860 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
LINC00500-201ENST00000515860 ERBB3P21860 1342 aa12.37□□□□□ -0.43
LINC00500-201ENST00000515860 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
LINC00500-201ENST00000515860 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
LINC00500-201ENST00000515860 PDIA6Q15084 440 aa12.35□□□□□ -0.43
LINC00500-201ENST00000515860 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
LINC00500-201ENST00000515860 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
LINC00500-201ENST00000515860 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00500-201ENST00000515860 MLLT3P42568 568 aaPredicted RBP12.28□□□□□ -0.44
LINC00500-201ENST00000515860 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
LINC00500-201ENST00000515860 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
LINC00500-201ENST00000515860 SLC34A2O95436 690 aa12.25□□□□□ -0.45
LINC00500-201ENST00000515860 PTCD2Q8WV60 388 aaKnown RBP12.25□□□□□ -0.45
LINC00500-201ENST00000515860 TBC1D12O60347 775 aa12.23□□□□□ -0.45
LINC00500-201ENST00000515860 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
LINC00500-201ENST00000515860 RNF166Q96A37 237 aaPredicted RBP12.2□□□□□ -0.46
LINC00500-201ENST00000515860 EVI5O60447 810 aa12.19□□□□□ -0.46
LINC00500-201ENST00000515860 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
LINC00500-201ENST00000515860 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
LINC00500-201ENST00000515860 PTGER2P43116 358 aa12.18□□□□□ -0.46
LINC00500-201ENST00000515860 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
LINC00500-201ENST00000515860 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
LINC00500-201ENST00000515860 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
LINC00500-201ENST00000515860 MYT1LQ9UL68 1186 aa12.15□□□□□ -0.46
LINC00500-201ENST00000515860 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
LINC00500-201ENST00000515860 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
LINC00500-201ENST00000515860 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
LINC00500-201ENST00000515860 DDX12PQ92771 950 aa12.12□□□□□ -0.47
LINC00500-201ENST00000515860 ZMYND10O75800 440 aa12.11□□□□□ -0.47
LINC00500-201ENST00000515860 OSBPP22059 807 aa12.11□□□□□ -0.47
LINC00500-201ENST00000515860 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
LINC00500-201ENST00000515860 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
LINC00500-201ENST00000515860 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
LINC00500-201ENST00000515860 PHF14O94880 888 aa12.04□□□□□ -0.48
LINC00500-201ENST00000515860 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
LINC00500-201ENST00000515860 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
LINC00500-201ENST00000515860 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
LINC00500-201ENST00000515860 GPR37O15354 613 aa12.02□□□□□ -0.49
LINC00500-201ENST00000515860 EPAS1Q99814 870 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms