RNA–Protein interactions for RNA: ENST00000515820.6

NKX6-1-202, Transcript of NK6 homeobox 1, humanhuman

TSL 3 BASIC

Gene NKX6-1, Length 2,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-202ENST00000515820 CHIC2Q9UKJ5 165 aa29.11■■■□□ 2.25
NKX6-1-202ENST00000515820 WASHC2AQ641Q2 1341 aa29.1■■■□□ 2.25
NKX6-1-202ENST00000515820 HSPA5P11021 654 aaKnown RBP29.09■■■□□ 2.25
NKX6-1-202ENST00000515820 CDK13Q14004 1512 aaKnown RBP29.09■■■□□ 2.25
NKX6-1-202ENST00000515820 KIAA0556O60303 1618 aa29.08■■■□□ 2.25
NKX6-1-202ENST00000515820 MPHOSPH9Q99550 1183 aa29.07■■■□□ 2.24
NKX6-1-202ENST00000515820 ROCK1Q13464 1354 aa29.06■■■□□ 2.24
NKX6-1-202ENST00000515820 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
NKX6-1-202ENST00000515820 PRG4Q92954 1404 aaPredicted RBP29.05■■■□□ 2.24
NKX6-1-202ENST00000515820 ERCC6L2Q5T890 1561 aa29.04■■■□□ 2.24
NKX6-1-202ENST00000515820 ANP32EQ9BTT0 268 aa29.02■■■□□ 2.24
NKX6-1-202ENST00000515820 CNTLNQ9NXG0 1405 aa29■■■□□ 2.23
NKX6-1-202ENST00000515820 DAPK1P53355 1430 aa28.98■■■□□ 2.23
NKX6-1-202ENST00000515820 L3MBTL2Q969R5 705 aa28.97■■■□□ 2.23
NKX6-1-202ENST00000515820 DNMT1P26358 1616 aaKnown RBP28.97■■■□□ 2.23
NKX6-1-202ENST00000515820 HNRNPUQ00839 825 aaKnown RBP eCLIP28.96■■■□□ 2.23
NKX6-1-202ENST00000515820 RPRD2Q5VT52 1461 aaKnown RBP28.96■■■□□ 2.23
NKX6-1-202ENST00000515820 NCOA1Q15788 1441 aa28.96■■■□□ 2.23
NKX6-1-202ENST00000515820 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
NKX6-1-202ENST00000515820 CLASP1Q7Z460 1538 aa28.93■■■□□ 2.22
NKX6-1-202ENST00000515820 CARMIL2Q6F5E8 1435 aa28.93■■■□□ 2.22
NKX6-1-202ENST00000515820 PLB1Q6P1J6 1458 aa28.92■■■□□ 2.22
NKX6-1-202ENST00000515820 ABCC5O15440 1437 aa28.92■■■□□ 2.22
NKX6-1-202ENST00000515820 OSCARQ8IYS5 282 aa28.92■■■□□ 2.22
NKX6-1-202ENST00000515820 RBM19Q9Y4C8 960 aaKnown RBP28.91■■■□□ 2.22
NKX6-1-202ENST00000515820 TEX14Q8IWB6 1497 aa28.9■■■□□ 2.22
NKX6-1-202ENST00000515820 CCDC7Q96M83 1385 aa28.9■■■□□ 2.22
NKX6-1-202ENST00000515820 NUP153P49790 1475 aaKnown RBP28.87■■■□□ 2.21
NKX6-1-202ENST00000515820 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
NKX6-1-202ENST00000515820 ERICH6BQ5W0A0 696 aa28.85■■■□□ 2.21
NKX6-1-202ENST00000515820 RAPGEF6Q8TEU7 1601 aa28.84■■■□□ 2.21
NKX6-1-202ENST00000515820 FOXD1Q16676 465 aa28.84■■■□□ 2.21
NKX6-1-202ENST00000515820 SPATA31E1Q6ZUB1 1445 aa28.83■■■□□ 2.21
NKX6-1-202ENST00000515820 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
NKX6-1-202ENST00000515820 POLR1AO95602 1720 aaPredicted RBP28.82■■■□□ 2.2
NKX6-1-202ENST00000515820 C11orf95C9JLR9 678 aaPredicted RBP28.82■■■□□ 2.2
NKX6-1-202ENST00000515820 CDK11AQ9UQ88 783 aaPredicted RBP28.81■■■□□ 2.2
NKX6-1-202ENST00000515820 NBPF8Q3BBV2 869 aa28.8■■■□□ 2.2
NKX6-1-202ENST00000515820 PTPRGP23470 1445 aa28.8■■■□□ 2.2
NKX6-1-202ENST00000515820 SLC4A1APQ9BWU0 796 aaKnown RBP28.75■■■□□ 2.19
NKX6-1-202ENST00000515820 ZNF644Q9H582 1327 aaPredicted RBP28.75■■■□□ 2.19
NKX6-1-202ENST00000515820 CCDC184Q52MB2 194 aa28.74■■■□□ 2.19
NKX6-1-202ENST00000515820 PZPP20742 1482 aa28.73■■■□□ 2.19
NKX6-1-202ENST00000515820 TROQ12816 1431 aaPredicted RBP28.73■■■□□ 2.19
NKX6-1-202ENST00000515820 ITSN2Q9NZM3 1697 aa28.71■■■□□ 2.19
NKX6-1-202ENST00000515820 KIF7Q2M1P5 1343 aa28.71■■■□□ 2.19
NKX6-1-202ENST00000515820 ADGBQ8N7X0 1667 aa28.71■■■□□ 2.19
NKX6-1-202ENST00000515820 CAMSAP2Q08AD1 1489 aa28.7■■■□□ 2.19
NKX6-1-202ENST00000515820 ZBED9Q6R2W3 1325 aa28.7■■■□□ 2.19
NKX6-1-202ENST00000515820 ADGRL2O95490 1459 aa28.69■■■□□ 2.18
NKX6-1-202ENST00000515820 MBD5Q9P267 1494 aa28.68■■■□□ 2.18
NKX6-1-202ENST00000515820 MRS2Q9HD23 443 aa28.67■■■□□ 2.18
NKX6-1-202ENST00000515820 ADCY10Q96PN6 1610 aa28.66■■■□□ 2.18
NKX6-1-202ENST00000515820 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.17
NKX6-1-202ENST00000515820 KIAA1107Q9UPP5 1409 aa28.63■■■□□ 2.17
NKX6-1-202ENST00000515820 PPP4R2Q9NY27 417 aa28.63■■■□□ 2.17
NKX6-1-202ENST00000515820 ABCA8O94911 1581 aa28.63■■■□□ 2.17
NKX6-1-202ENST00000515820 CROCC2H7BZ55 1655 aa28.63■■■□□ 2.17
NKX6-1-202ENST00000515820 IRX6P78412 446 aaPredicted RBP28.61■■■□□ 2.17
NKX6-1-202ENST00000515820 CFDP1Q9UEE9 299 aaPredicted RBP28.61■■■□□ 2.17
NKX6-1-202ENST00000515820 FAM9BQ8IZU0 186 aa28.61■■■□□ 2.17
NKX6-1-202ENST00000515820 FANCIQ9NVI1 1328 aa28.59■■■□□ 2.17
NKX6-1-202ENST00000515820 ATP10BO94823 1461 aa28.56■■■□□ 2.16
NKX6-1-202ENST00000515820 KIF14Q15058 1648 aa28.56■■■□□ 2.16
NKX6-1-202ENST00000515820 ARID4BQ4LE39 1312 aaPredicted RBP28.55■■■□□ 2.16
NKX6-1-202ENST00000515820 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
NKX6-1-202ENST00000515820 ANKRD30AQ9BXX3 1397 aa28.54■■■□□ 2.16
NKX6-1-202ENST00000515820 USP47Q96K76 1375 aa28.52■■■□□ 2.16
NKX6-1-202ENST00000515820 KDM5CP41229 1560 aa28.5■■■□□ 2.15
NKX6-1-202ENST00000515820 UHRF1BP1Q6BDS2 1440 aa28.49■■■□□ 2.15
NKX6-1-202ENST00000515820 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
NKX6-1-202ENST00000515820 SHANK2Q9UPX8 1470 aa28.48■■■□□ 2.15
NKX6-1-202ENST00000515820 ANKRD50Q9ULJ7 1429 aa28.48■■■□□ 2.15
NKX6-1-202ENST00000515820 PKD2Q13563 968 aa28.47■■■□□ 2.15
NKX6-1-202ENST00000515820 MSH5O43196 834 aa28.46■■■□□ 2.15
NKX6-1-202ENST00000515820 SMG6Q86US8 1419 aaKnown RBP28.45■■■□□ 2.14
NKX6-1-202ENST00000515820 ABCC2Q92887 1545 aa28.45■■■□□ 2.14
NKX6-1-202ENST00000515820 RALGAPBQ86X10 1494 aa28.44■■■□□ 2.14
NKX6-1-202ENST00000515820 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
NKX6-1-202ENST00000515820 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
NKX6-1-202ENST00000515820 ROCK2O75116 1388 aaKnown RBP28.43■■■□□ 2.14
NKX6-1-202ENST00000515820 KDM5DQ9BY66 1539 aa28.42■■■□□ 2.14
NKX6-1-202ENST00000515820 PLEKHD1A6NEE1 506 aa28.41■■■□□ 2.14
NKX6-1-202ENST00000515820 ZNF777Q9ULD5 760 aaPredicted RBP28.41■■■□□ 2.14
NKX6-1-202ENST00000515820 CDC42BPAQ5VT25 1732 aa28.39■■■□□ 2.14
NKX6-1-202ENST00000515820 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.14
NKX6-1-202ENST00000515820 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
NKX6-1-202ENST00000515820 NUP155O75694 1391 aa28.34■■■□□ 2.13
NKX6-1-202ENST00000515820 RNF123Q5XPI4 1314 aa28.33■■■□□ 2.13
NKX6-1-202ENST00000515820 ZCCHC11Q5TAX3 1644 aaKnown RBP28.33■■■□□ 2.13
NKX6-1-202ENST00000515820 ZNF326Q5BKZ1 582 aaKnown RBP28.33■■■□□ 2.12
NKX6-1-202ENST00000515820 B4GALNT3Q6L9W6 998 aa28.33■■■□□ 2.12
NKX6-1-202ENST00000515820 NUDCQ9Y266 331 aa28.33■■■□□ 2.12
NKX6-1-202ENST00000515820 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
NKX6-1-202ENST00000515820 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
NKX6-1-202ENST00000515820 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
NKX6-1-202ENST00000515820 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
NKX6-1-202ENST00000515820 KTN1Q86UP2 1357 aaKnown RBP28.27■■■□□ 2.12
NKX6-1-202ENST00000515820 PNISRQ8TF01 805 aaKnown RBP28.27■■■□□ 2.12
NKX6-1-202ENST00000515820 CARD11Q9BXL7 1154 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms