RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
SDHA-219ENST00000515815 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
SDHA-219ENST00000515815 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
SDHA-219ENST00000515815 FER1L4A9Z1Z3 1794 aa19.6■□□□□ 0.73
SDHA-219ENST00000515815 MADDQ8WXG6 1647 aa19.59■□□□□ 0.73
SDHA-219ENST00000515815 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
SDHA-219ENST00000515815 ABCC1P33527 1531 aa19.58■□□□□ 0.73
SDHA-219ENST00000515815 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
SDHA-219ENST00000515815 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.72
SDHA-219ENST00000515815 PLCH2O75038 1416 aa19.58■□□□□ 0.72
SDHA-219ENST00000515815 KDM5CP41229 1560 aa19.57■□□□□ 0.72
SDHA-219ENST00000515815 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
SDHA-219ENST00000515815 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
SDHA-219ENST00000515815 EHBP1L1Q8N3D4 1523 aa19.56■□□□□ 0.72
SDHA-219ENST00000515815 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
SDHA-219ENST00000515815 MAGI2Q86UL8 1455 aa19.52■□□□□ 0.72
SDHA-219ENST00000515815 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
SDHA-219ENST00000515815 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
SDHA-219ENST00000515815 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
SDHA-219ENST00000515815 RAPGEF3O95398 923 aa19.49■□□□□ 0.71
SDHA-219ENST00000515815 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
SDHA-219ENST00000515815 TIAM1Q13009 1591 aa19.48■□□□□ 0.71
SDHA-219ENST00000515815 SCAPERQ9BY12 1400 aa19.47■□□□□ 0.71
SDHA-219ENST00000515815 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
SDHA-219ENST00000515815 REREQ9P2R6 1566 aa19.45■□□□□ 0.7
SDHA-219ENST00000515815 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
SDHA-219ENST00000515815 KIDINS220Q9ULH0 1771 aa19.44■□□□□ 0.7
SDHA-219ENST00000515815 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
SDHA-219ENST00000515815 INO80Q9ULG1 1556 aaPredicted RBP19.42■□□□□ 0.7
SDHA-219ENST00000515815 PTPRMP28827 1452 aa19.4■□□□□ 0.7
SDHA-219ENST00000515815 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
SDHA-219ENST00000515815 MTUS2Q5JR59 1369 aa19.39■□□□□ 0.69
SDHA-219ENST00000515815 ADGBQ8N7X0 1667 aa19.38■□□□□ 0.69
SDHA-219ENST00000515815 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
SDHA-219ENST00000515815 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
SDHA-219ENST00000515815 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
SDHA-219ENST00000515815 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
SDHA-219ENST00000515815 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
SDHA-219ENST00000515815 ATP10AO60312 1499 aa19.35■□□□□ 0.69
SDHA-219ENST00000515815 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
SDHA-219ENST00000515815 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
SDHA-219ENST00000515815 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
SDHA-219ENST00000515815 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
SDHA-219ENST00000515815 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
SDHA-219ENST00000515815 C3P01024 1663 aa19.3■□□□□ 0.68
SDHA-219ENST00000515815 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
SDHA-219ENST00000515815 PLXNC1O60486 1568 aa19.29■□□□□ 0.68
SDHA-219ENST00000515815 AGLP35573 1532 aa19.28■□□□□ 0.68
SDHA-219ENST00000515815 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
SDHA-219ENST00000515815 CROCC2H7BZ55 1655 aa19.26■□□□□ 0.67
SDHA-219ENST00000515815 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
SDHA-219ENST00000515815 CAMSAP2Q08AD1 1489 aa19.25■□□□□ 0.67
SDHA-219ENST00000515815 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
SDHA-219ENST00000515815 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
SDHA-219ENST00000515815 KIAA1107Q9UPP5 1409 aa19.23■□□□□ 0.67
SDHA-219ENST00000515815 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
SDHA-219ENST00000515815 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
SDHA-219ENST00000515815 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
SDHA-219ENST00000515815 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
SDHA-219ENST00000515815 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
SDHA-219ENST00000515815 CCDC141Q6ZP82 1450 aa19.18■□□□□ 0.66
SDHA-219ENST00000515815 CFDP1Q9UEE9 299 aaPredicted RBP19.17■□□□□ 0.66
SDHA-219ENST00000515815 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
SDHA-219ENST00000515815 MLECQ14165 292 aa19.15■□□□□ 0.66
SDHA-219ENST00000515815 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
SDHA-219ENST00000515815 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.66
SDHA-219ENST00000515815 A2MP01023 1474 aa19.14■□□□□ 0.65
SDHA-219ENST00000515815 MBD5Q9P267 1494 aa19.14■□□□□ 0.65
SDHA-219ENST00000515815 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
SDHA-219ENST00000515815 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
SDHA-219ENST00000515815 SPAG9O60271 1321 aaKnown RBP19.12■□□□□ 0.65
SDHA-219ENST00000515815 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
SDHA-219ENST00000515815 PTPN23Q9H3S7 1636 aa19.11■□□□□ 0.65
SDHA-219ENST00000515815 CNTLNQ9NXG0 1405 aa19.1■□□□□ 0.65
SDHA-219ENST00000515815 SETD1BQ9UPS6 1966 aaKnown RBP19.1■□□□□ 0.65
SDHA-219ENST00000515815 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
SDHA-219ENST00000515815 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
SDHA-219ENST00000515815 RNF17Q9BXT8 1623 aaKnown RBP19.07■□□□□ 0.64
SDHA-219ENST00000515815 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
SDHA-219ENST00000515815 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
SDHA-219ENST00000515815 RTEL1-TNFRSF6BF6WH68 1400 aa19.07■□□□□ 0.64
SDHA-219ENST00000515815 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
SDHA-219ENST00000515815 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
SDHA-219ENST00000515815 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
SDHA-219ENST00000515815 CEP152O94986 1710 aa19.04■□□□□ 0.64
SDHA-219ENST00000515815 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
SDHA-219ENST00000515815 MIA2Q96PC5 1412 aa19.03■□□□□ 0.64
SDHA-219ENST00000515815 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
SDHA-219ENST00000515815 SHANK2Q9UPX8 1470 aa19.01■□□□□ 0.63
SDHA-219ENST00000515815 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
SDHA-219ENST00000515815 ESF1Q9H501 851 aaKnown RBP19■□□□□ 0.63
SDHA-219ENST00000515815 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
SDHA-219ENST00000515815 CAMSAP1Q5T5Y3 1602 aa18.98■□□□□ 0.63
SDHA-219ENST00000515815 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
SDHA-219ENST00000515815 APLP2Q06481 763 aa18.96■□□□□ 0.63
SDHA-219ENST00000515815 NPATQ14207 1427 aa18.96■□□□□ 0.63
SDHA-219ENST00000515815 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
SDHA-219ENST00000515815 TCOF1Q13428 1488 aaKnown RBP18.95■□□□□ 0.62
SDHA-219ENST00000515815 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
SDHA-219ENST00000515815 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms