RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 EFCAB2Q5VUJ9 269 aa28.71■■■□□ 2.19
SFXN1-212ENST00000515791 BCORL1Q5H9F3 1711 aa28.69■■■□□ 2.18
SFXN1-212ENST00000515791 CDC42BPBQ9Y5S2 1711 aa28.69■■■□□ 2.18
SFXN1-212ENST00000515791 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
SFXN1-212ENST00000515791 MAGI2Q86UL8 1455 aa28.68■■■□□ 2.18
SFXN1-212ENST00000515791 SIGLEC1Q9BZZ2 1709 aa28.67■■■□□ 2.18
SFXN1-212ENST00000515791 ZFYVE16Q7Z3T8 1539 aa28.65■■■□□ 2.18
SFXN1-212ENST00000515791 ARHGAP5Q13017 1502 aa28.64■■■□□ 2.18
SFXN1-212ENST00000515791 PREX2Q70Z35 1606 aa28.63■■■□□ 2.17
SFXN1-212ENST00000515791 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
SFXN1-212ENST00000515791 PTPRMP28827 1452 aa28.59■■■□□ 2.17
SFXN1-212ENST00000515791 KDM5CP41229 1560 aa28.58■■■□□ 2.17
SFXN1-212ENST00000515791 HECW2Q9P2P5 1572 aa28.58■■■□□ 2.17
SFXN1-212ENST00000515791 MADDQ8WXG6 1647 aa28.58■■■□□ 2.17
SFXN1-212ENST00000515791 CDC42BPAQ5VT25 1732 aa28.58■■■□□ 2.17
SFXN1-212ENST00000515791 ARID4BQ4LE39 1312 aaPredicted RBP28.56■■■□□ 2.16
SFXN1-212ENST00000515791 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
SFXN1-212ENST00000515791 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
SFXN1-212ENST00000515791 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
SFXN1-212ENST00000515791 ABCC1P33527 1531 aa28.53■■■□□ 2.16
SFXN1-212ENST00000515791 ATP10AO60312 1499 aa28.52■■■□□ 2.16
SFXN1-212ENST00000515791 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
SFXN1-212ENST00000515791 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
SFXN1-212ENST00000515791 ITSN2Q9NZM3 1697 aa28.49■■■□□ 2.15
SFXN1-212ENST00000515791 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
SFXN1-212ENST00000515791 C9orf84Q5VXU9 1444 aa28.47■■■□□ 2.15
SFXN1-212ENST00000515791 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
SFXN1-212ENST00000515791 RIMS1Q86UR5 1692 aaKnown RBP28.45■■■□□ 2.15
SFXN1-212ENST00000515791 SAMD9LQ8IVG5 1584 aa28.45■■■□□ 2.14
SFXN1-212ENST00000515791 DIP2CQ9Y2E4 1556 aa28.44■■■□□ 2.14
SFXN1-212ENST00000515791 MTUS2Q5JR59 1369 aa28.41■■■□□ 2.14
SFXN1-212ENST00000515791 ABCA6Q8N139 1617 aa28.41■■■□□ 2.14
SFXN1-212ENST00000515791 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
SFXN1-212ENST00000515791 EHBP1L1Q8N3D4 1523 aa28.38■■■□□ 2.13
SFXN1-212ENST00000515791 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
SFXN1-212ENST00000515791 MLECQ14165 292 aa28.36■■■□□ 2.13
SFXN1-212ENST00000515791 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
SFXN1-212ENST00000515791 FER1L4A9Z1Z3 1794 aa28.35■■■□□ 2.13
SFXN1-212ENST00000515791 SYCP2Q9BX26 1530 aa28.35■■■□□ 2.13
SFXN1-212ENST00000515791 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
SFXN1-212ENST00000515791 ZNF777Q9ULD5 760 aaPredicted RBP28.34■■■□□ 2.13
SFXN1-212ENST00000515791 KIAA1107Q9UPP5 1409 aa28.34■■■□□ 2.13
SFXN1-212ENST00000515791 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
SFXN1-212ENST00000515791 HNRNPMP52272 730 aaKnown RBP eCLIP28.31■■■□□ 2.12
SFXN1-212ENST00000515791 LMTK3Q96Q04 1460 aa28.31■■■□□ 2.12
SFXN1-212ENST00000515791 AGLP35573 1532 aa28.3■■■□□ 2.12
SFXN1-212ENST00000515791 VPS8Q8N3P4 1428 aa28.3■■■□□ 2.12
SFXN1-212ENST00000515791 PLEKHH2Q8IVE3 1493 aa28.28■■■□□ 2.12
SFXN1-212ENST00000515791 MYT1LQ9UL68 1186 aa28.27■■■□□ 2.12
SFXN1-212ENST00000515791 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
SFXN1-212ENST00000515791 NCOA2Q15596 1464 aa28.23■■■□□ 2.11
SFXN1-212ENST00000515791 MBD5Q9P267 1494 aa28.23■■■□□ 2.11
SFXN1-212ENST00000515791 INO80Q9ULG1 1556 aaPredicted RBP28.23■■■□□ 2.11
SFXN1-212ENST00000515791 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
SFXN1-212ENST00000515791 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
SFXN1-212ENST00000515791 ATP7AQ04656 1500 aa28.2■■■□□ 2.1
SFXN1-212ENST00000515791 LRRC9Q6ZRR7 1453 aa28.17■■■□□ 2.1
SFXN1-212ENST00000515791 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
SFXN1-212ENST00000515791 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
SFXN1-212ENST00000515791 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
SFXN1-212ENST00000515791 PLXNC1O60486 1568 aa28.16■■■□□ 2.1
SFXN1-212ENST00000515791 C3P01024 1663 aa28.1■■■□□ 2.09
SFXN1-212ENST00000515791 KANK4Q5T7N3 995 aaPredicted RBP28.1■■■□□ 2.09
SFXN1-212ENST00000515791 A2MP01023 1474 aa28.09■■■□□ 2.09
SFXN1-212ENST00000515791 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
SFXN1-212ENST00000515791 HSPA2P54652 639 aa28.09■■■□□ 2.09
SFXN1-212ENST00000515791 RTEL1-TNFRSF6BF6WH68 1400 aa28.08■■■□□ 2.09
SFXN1-212ENST00000515791 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
SFXN1-212ENST00000515791 ADGBQ8N7X0 1667 aa28.05■■■□□ 2.08
SFXN1-212ENST00000515791 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
SFXN1-212ENST00000515791 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
SFXN1-212ENST00000515791 SETD1BQ9UPS6 1966 aaKnown RBP28.01■■■□□ 2.07
SFXN1-212ENST00000515791 ARHGEF5Q12774 1597 aa28.01■■■□□ 2.07
SFXN1-212ENST00000515791 MROH2AA6NES4 1674 aa28■■■□□ 2.07
SFXN1-212ENST00000515791 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
SFXN1-212ENST00000515791 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
SFXN1-212ENST00000515791 DHX29Q7Z478 1369 aaKnown RBP27.97■■■□□ 2.07
SFXN1-212ENST00000515791 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
SFXN1-212ENST00000515791 ZMYM3Q14202 1370 aa27.95■■■□□ 2.06
SFXN1-212ENST00000515791 UHRF1BP1Q6BDS2 1440 aa27.94■■■□□ 2.06
SFXN1-212ENST00000515791 CLTCQ00610 1675 aaKnown RBP27.94■■■□□ 2.06
SFXN1-212ENST00000515791 MYOM3Q5VTT5 1437 aa27.93■■■□□ 2.06
SFXN1-212ENST00000515791 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
SFXN1-212ENST00000515791 GGT6Q6P531 493 aa27.9■■■□□ 2.06
SFXN1-212ENST00000515791 STRCQ7RTU9 1775 aa27.9■■■□□ 2.06
SFXN1-212ENST00000515791 NPATQ14207 1427 aa27.9■■■□□ 2.06
SFXN1-212ENST00000515791 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
SFXN1-212ENST00000515791 MAST1Q9Y2H9 1570 aa27.88■■■□□ 2.05
SFXN1-212ENST00000515791 PTPRKQ15262 1439 aa27.84■■■□□ 2.05
SFXN1-212ENST00000515791 TSPY4P0CV99 314 aa27.84■■■□□ 2.05
SFXN1-212ENST00000515791 TSPY10P0CW01 314 aa27.84■■■□□ 2.05
SFXN1-212ENST00000515791 KIF3BO15066 747 aa27.81■■■□□ 2.04
SFXN1-212ENST00000515791 APLP2Q06481 763 aa27.78■■■□□ 2.04
SFXN1-212ENST00000515791 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
SFXN1-212ENST00000515791 PTPN23Q9H3S7 1636 aa27.76■■■□□ 2.03
SFXN1-212ENST00000515791 MYO3AQ8NEV4 1616 aa27.75■■■□□ 2.03
SFXN1-212ENST00000515791 KDM5DQ9BY66 1539 aa27.75■■■□□ 2.03
SFXN1-212ENST00000515791 TCOF1Q13428 1488 aaKnown RBP27.74■■■□□ 2.03
SFXN1-212ENST00000515791 ZNF142P52746 1687 aaPredicted RBP27.74■■■□□ 2.03
SFXN1-212ENST00000515791 ABCC5O15440 1437 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms