RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 KDM4FA0A1W2PPD8 638 aa32.41■■■□□ 2.78
ABCC3-217ENST00000515707 ARHGEF40Q8TER5 1519 aa32.41■■■□□ 2.78
ABCC3-217ENST00000515707 CDC42BPAQ5VT25 1732 aa32.39■■■□□ 2.78
ABCC3-217ENST00000515707 POGZQ7Z3K3 1410 aa32.36■■■□□ 2.77
ABCC3-217ENST00000515707 EFCAB2Q5VUJ9 269 aa32.34■■■□□ 2.77
ABCC3-217ENST00000515707 SCAPERQ9BY12 1400 aa32.33■■■□□ 2.77
ABCC3-217ENST00000515707 EHBP1L1Q8N3D4 1523 aa32.31■■■□□ 2.76
ABCC3-217ENST00000515707 VPS8Q8N3P4 1428 aa32.3■■■□□ 2.76
ABCC3-217ENST00000515707 MTUS2Q5JR59 1369 aa32.29■■■□□ 2.76
ABCC3-217ENST00000515707 ZFYVE16Q7Z3T8 1539 aa32.28■■■□□ 2.76
ABCC3-217ENST00000515707 ABCC1P33527 1531 aa32.27■■■□□ 2.76
ABCC3-217ENST00000515707 MAGI2Q86UL8 1455 aa32.27■■■□□ 2.76
ABCC3-217ENST00000515707 ZNF518AQ6AHZ1 1483 aa32.24■■■□□ 2.75
ABCC3-217ENST00000515707 ITSN2Q9NZM3 1697 aa32.24■■■□□ 2.75
ABCC3-217ENST00000515707 KDM5CP41229 1560 aa32.24■■■□□ 2.75
ABCC3-217ENST00000515707 TIAM1Q13009 1591 aa32.24■■■□□ 2.75
ABCC3-217ENST00000515707 GPATCH8Q9UKJ3 1502 aaKnown RBP32.21■■■□□ 2.75
ABCC3-217ENST00000515707 YEATS2Q9ULM3 1422 aa32.19■■■□□ 2.74
ABCC3-217ENST00000515707 SAMD9LQ8IVG5 1584 aa32.18■■■□□ 2.74
ABCC3-217ENST00000515707 HECW2Q9P2P5 1572 aa32.17■■■□□ 2.74
ABCC3-217ENST00000515707 BCORL1Q5H9F3 1711 aa32.17■■■□□ 2.74
ABCC3-217ENST00000515707 ADAMTSL3P82987 1691 aa32.15■■■□□ 2.74
ABCC3-217ENST00000515707 SUPT6HQ7KZ85 1726 aaKnown RBP32.14■■■□□ 2.74
ABCC3-217ENST00000515707 CCNB3Q8WWL7 1395 aa32.14■■■□□ 2.74
ABCC3-217ENST00000515707 ARHGEF12Q9NZN5 1544 aa32.14■■■□□ 2.74
ABCC3-217ENST00000515707 SIGLEC1Q9BZZ2 1709 aa32.14■■■□□ 2.74
ABCC3-217ENST00000515707 SYCP2Q9BX26 1530 aa32.1■■■□□ 2.73
ABCC3-217ENST00000515707 MAP3K1Q13233 1512 aa32.09■■■□□ 2.73
ABCC3-217ENST00000515707 TRAPPC8Q9Y2L5 1435 aa32.08■■■□□ 2.73
ABCC3-217ENST00000515707 PLEKHH2Q8IVE3 1493 aa32.06■■■□□ 2.72
ABCC3-217ENST00000515707 DIP2CQ9Y2E4 1556 aa32.06■■■□□ 2.72
ABCC3-217ENST00000515707 NCOA2Q15596 1464 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 MLH3Q9UHC1 1453 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 ABCA6Q8N139 1617 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 MADDQ8WXG6 1647 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 AFAP1Q8N556 730 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 C9orf84Q5VXU9 1444 aa32.05■■■□□ 2.72
ABCC3-217ENST00000515707 ATP10AO60312 1499 aa32.04■■■□□ 2.72
ABCC3-217ENST00000515707 LRRC9Q6ZRR7 1453 aa32.04■■■□□ 2.72
ABCC3-217ENST00000515707 ARID4BQ4LE39 1312 aaPredicted RBP32.04■■■□□ 2.72
ABCC3-217ENST00000515707 CFDP1Q9UEE9 299 aaPredicted RBP32.02■■■□□ 2.72
ABCC3-217ENST00000515707 ZNF777Q9ULD5 760 aaPredicted RBP32.01■■■□□ 2.71
ABCC3-217ENST00000515707 KIAA1107Q9UPP5 1409 aa32■■■□□ 2.71
ABCC3-217ENST00000515707 KIDINS220Q9ULH0 1771 aa32■■■□□ 2.71
ABCC3-217ENST00000515707 REREQ9P2R6 1566 aa32■■■□□ 2.71
ABCC3-217ENST00000515707 RIMS1Q86UR5 1692 aaKnown RBP31.95■■■□□ 2.71
ABCC3-217ENST00000515707 INO80Q9ULG1 1556 aaPredicted RBP31.94■■■□□ 2.7
ABCC3-217ENST00000515707 PTPRMP28827 1452 aa31.94■■■□□ 2.7
ABCC3-217ENST00000515707 FER1L4A9Z1Z3 1794 aa31.93■■■□□ 2.7
ABCC3-217ENST00000515707 MYT1LQ9UL68 1186 aa31.91■■■□□ 2.7
ABCC3-217ENST00000515707 ATP7AQ04656 1500 aa31.9■■■□□ 2.7
ABCC3-217ENST00000515707 HNRNPMP52272 730 aaKnown RBP eCLIP31.88■■■□□ 2.69
ABCC3-217ENST00000515707 CAMSAP2Q08AD1 1489 aa31.88■■■□□ 2.69
ABCC3-217ENST00000515707 AGLP35573 1532 aa31.85■■■□□ 2.69
ABCC3-217ENST00000515707 MBD5Q9P267 1494 aa31.85■■■□□ 2.69
ABCC3-217ENST00000515707 ZNF644Q9H582 1327 aaPredicted RBP31.85■■■□□ 2.69
ABCC3-217ENST00000515707 SPAG9O60271 1321 aaKnown RBP31.84■■■□□ 2.69
ABCC3-217ENST00000515707 KANK4Q5T7N3 995 aaPredicted RBP31.84■■■□□ 2.69
ABCC3-217ENST00000515707 CCDC141Q6ZP82 1450 aa31.78■■■□□ 2.68
ABCC3-217ENST00000515707 ADGBQ8N7X0 1667 aa31.78■■■□□ 2.68
ABCC3-217ENST00000515707 PLXNC1O60486 1568 aa31.77■■■□□ 2.68
ABCC3-217ENST00000515707 ARHGEF5Q12774 1597 aa31.77■■■□□ 2.68
ABCC3-217ENST00000515707 APLP2Q06481 763 aa31.77■■■□□ 2.68
ABCC3-217ENST00000515707 MLECQ14165 292 aa31.77■■■□□ 2.68
ABCC3-217ENST00000515707 MYOM3Q5VTT5 1437 aa31.76■■■□□ 2.68
ABCC3-217ENST00000515707 MIA2Q96PC5 1412 aa31.72■■■□□ 2.67
ABCC3-217ENST00000515707 RTEL1-TNFRSF6BF6WH68 1400 aa31.71■■■□□ 2.67
ABCC3-217ENST00000515707 A2MP01023 1474 aa31.7■■■□□ 2.66
ABCC3-217ENST00000515707 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
ABCC3-217ENST00000515707 PTPN23Q9H3S7 1636 aa31.61■■■□□ 2.65
ABCC3-217ENST00000515707 MAST1Q9Y2H9 1570 aa31.61■■■□□ 2.65
ABCC3-217ENST00000515707 C3P01024 1663 aa31.6■■■□□ 2.65
ABCC3-217ENST00000515707 LMTK3Q96Q04 1460 aa31.59■■■□□ 2.65
ABCC3-217ENST00000515707 MROH2AA6NES4 1674 aa31.58■■■□□ 2.65
ABCC3-217ENST00000515707 CROCC2H7BZ55 1655 aa31.58■■■□□ 2.65
ABCC3-217ENST00000515707 CNTLNQ9NXG0 1405 aa31.57■■■□□ 2.64
ABCC3-217ENST00000515707 FGD6Q6ZV73 1430 aa31.56■■■□□ 2.64
ABCC3-217ENST00000515707 PREX1Q8TCU6 1659 aa31.54■■■□□ 2.64
ABCC3-217ENST00000515707 PLPPR3Q6T4P5 718 aa31.54■■■□□ 2.64
ABCC3-217ENST00000515707 TCOF1Q13428 1488 aaKnown RBP31.52■■■□□ 2.64
ABCC3-217ENST00000515707 CLTCQ00610 1675 aaKnown RBP31.51■■■□□ 2.64
ABCC3-217ENST00000515707 DHX29Q7Z478 1369 aaKnown RBP31.51■■■□□ 2.63
ABCC3-217ENST00000515707 ESF1Q9H501 851 aaKnown RBP31.5■■■□□ 2.63
ABCC3-217ENST00000515707 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
ABCC3-217ENST00000515707 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
ABCC3-217ENST00000515707 DNMT1P26358 1616 aaKnown RBP31.49■■■□□ 2.63
ABCC3-217ENST00000515707 SHANK2Q9UPX8 1470 aa31.48■■■□□ 2.63
ABCC3-217ENST00000515707 CEBPAP49715 358 aaPredicted RBP31.45■■■□□ 2.63
ABCC3-217ENST00000515707 EIF2AK4Q9P2K8 1649 aaKnown RBP31.42■■■□□ 2.62
ABCC3-217ENST00000515707 SETD1BQ9UPS6 1966 aaKnown RBP31.42■■■□□ 2.62
ABCC3-217ENST00000515707 FAM135AQ9P2D6 1515 aa31.42■■■□□ 2.62
ABCC3-217ENST00000515707 ABCC5O15440 1437 aa31.41■■■□□ 2.62
ABCC3-217ENST00000515707 DAPK1P53355 1430 aa31.41■■■□□ 2.62
ABCC3-217ENST00000515707 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
ABCC3-217ENST00000515707 GGT6Q6P531 493 aa31.39■■■□□ 2.62
ABCC3-217ENST00000515707 KDM5DQ9BY66 1539 aa31.37■■■□□ 2.61
ABCC3-217ENST00000515707 DUOX2Q9NRD8 1548 aa31.36■■■□□ 2.61
ABCC3-217ENST00000515707 UHRF1BP1Q6BDS2 1440 aa31.36■■■□□ 2.61
ABCC3-217ENST00000515707 PPP6R1Q9UPN7 881 aa31.36■■■□□ 2.61
ABCC3-217ENST00000515707 NPATQ14207 1427 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms