RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 E2F4Q16254 413 aa4□□□□□ -1.77
AC025539.1-201ENST00000515343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4□□□□□ -1.77
AC025539.1-201ENST00000515343 MICALL2Q8IY33 904 aa3.99□□□□□ -1.77
AC025539.1-201ENST00000515343 L3MBTL3Q96JM7 780 aaPredicted RBP3.99□□□□□ -1.77
AC025539.1-201ENST00000515343 TRIM35Q9UPQ4 493 aa3.99□□□□□ -1.77
AC025539.1-201ENST00000515343 POTEFA5A3E0 1075 aa3.98□□□□□ -1.77
AC025539.1-201ENST00000515343 DDX27Q96GQ7 796 aaKnown RBP3.98□□□□□ -1.77
AC025539.1-201ENST00000515343 KDM4FA0A1W2PPD8 638 aa3.98□□□□□ -1.77
AC025539.1-201ENST00000515343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.98□□□□□ -1.77
AC025539.1-201ENST00000515343 PDIA6Q15084 440 aa3.97□□□□□ -1.77
AC025539.1-201ENST00000515343 ANO8Q9HCE9 1232 aaPredicted RBP3.97□□□□□ -1.77
AC025539.1-201ENST00000515343 BOLA1Q9Y3E2 137 aa3.97□□□□□ -1.77
AC025539.1-201ENST00000515343 WDR70Q9NW82 654 aa3.97□□□□□ -1.77
AC025539.1-201ENST00000515343 POTEIP0CG38 1075 aa3.97□□□□□ -1.77
AC025539.1-201ENST00000515343 NBR1Q14596 966 aa3.96□□□□□ -1.78
AC025539.1-201ENST00000515343 PELP1Q8IZL8 1130 aaKnown RBP3.96□□□□□ -1.78
AC025539.1-201ENST00000515343 GOLGA2Q08379 1002 aa3.96□□□□□ -1.78
AC025539.1-201ENST00000515343 OXER1Q8TDS5 423 aa3.96□□□□□ -1.78
AC025539.1-201ENST00000515343 PLSCR2Q9NRY7 297 aa3.96□□□□□ -1.78
AC025539.1-201ENST00000515343 PPP1R15BQ5SWA1 713 aa3.95□□□□□ -1.78
AC025539.1-201ENST00000515343 PTCD2Q8WV60 388 aaKnown RBP3.95□□□□□ -1.78
AC025539.1-201ENST00000515343 ZMYND10O75800 440 aa3.94□□□□□ -1.78
AC025539.1-201ENST00000515343 SMYD5Q6GMV2 418 aa3.94□□□□□ -1.78
AC025539.1-201ENST00000515343 LARP6Q9BRS8 491 aaKnown RBP3.93□□□□□ -1.78
AC025539.1-201ENST00000515343 ZSWIM6Q9HCJ5 1215 aa3.93□□□□□ -1.78
AC025539.1-201ENST00000515343 EMILIN3Q9NT22 766 aa3.93□□□□□ -1.78
AC025539.1-201ENST00000515343 GPR37O15354 613 aa3.92□□□□□ -1.78
AC025539.1-201ENST00000515343 DSG2Q14126 1118 aa3.92□□□□□ -1.78
AC025539.1-201ENST00000515343 DAXXQ9UER7 740 aaPredicted RBP3.92□□□□□ -1.78
AC025539.1-201ENST00000515343 DPY19L2Q6NUT2 758 aa3.92□□□□□ -1.78
AC025539.1-201ENST00000515343 TMEM92Q6UXU6 159 aa3.91□□□□□ -1.78
AC025539.1-201ENST00000515343 BARGINQ6ZT62 677 aa3.91□□□□□ -1.78
AC025539.1-201ENST00000515343 DCBLD2Q96PD2 775 aa3.91□□□□□ -1.78
AC025539.1-201ENST00000515343 PLCG2P16885 1265 aa3.91□□□□□ -1.78
AC025539.1-201ENST00000515343 ZC3H15Q8WU90 426 aaKnown RBP3.91□□□□□ -1.78
AC025539.1-201ENST00000515343 COLQQ9Y215 455 aaPredicted RBP3.9□□□□□ -1.78
AC025539.1-201ENST00000515343 LMOD2Q6P5Q4 547 aa3.9□□□□□ -1.79
AC025539.1-201ENST00000515343 TMC2Q8TDI7 906 aa3.9□□□□□ -1.79
AC025539.1-201ENST00000515343 TPRNQ4KMQ1 711 aa3.89□□□□□ -1.79
AC025539.1-201ENST00000515343 MAMSTRQ6ZN01 415 aa3.89□□□□□ -1.79
AC025539.1-201ENST00000515343 TULP1O00294 542 aaPredicted RBP3.89□□□□□ -1.79
AC025539.1-201ENST00000515343 C2orf72A6NCS6 295 aa3.88□□□□□ -1.79
AC025539.1-201ENST00000515343 TMEM132AQ24JP5 1023 aa3.88□□□□□ -1.79
AC025539.1-201ENST00000515343 PLPP6Q8IY26 295 aa3.88□□□□□ -1.79
AC025539.1-201ENST00000515343 METRNQ9UJH8 293 aa3.88□□□□□ -1.79
AC025539.1-201ENST00000515343 OSBPP22059 807 aa3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 TBC1D12O60347 775 aa3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 PHF14O94880 888 aa3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 EPAS1Q99814 870 aa3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 TTC13Q8NBP0 860 aa3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 RBM27Q9P2N5 1060 aaKnown RBP3.87□□□□□ -1.79
AC025539.1-201ENST00000515343 SEMA3EO15041 775 aa3.86□□□□□ -1.79
AC025539.1-201ENST00000515343 ONECUT3O60422 494 aaPredicted RBP3.86□□□□□ -1.79
AC025539.1-201ENST00000515343 POTEMA6NI47 508 aa3.86□□□□□ -1.79
AC025539.1-201ENST00000515343 TMUB1Q9BVT8 246 aa3.86□□□□□ -1.79
AC025539.1-201ENST00000515343 POTEJP0CG39 1038 aa3.85□□□□□ -1.79
AC025539.1-201ENST00000515343 PRKCSHP14314 528 aaPredicted RBP3.85□□□□□ -1.79
AC025539.1-201ENST00000515343 AMHR2Q16671 573 aa3.84□□□□□ -1.79
AC025539.1-201ENST00000515343 HOXB3P14651 431 aaPredicted RBP3.84□□□□□ -1.79
AC025539.1-201ENST00000515343 POTEGQ6S5H5 508 aa3.84□□□□□ -1.79
AC025539.1-201ENST00000515343 OTUD5Q96G74 571 aa3.84□□□□□ -1.79
AC025539.1-201ENST00000515343 MINK1Q8N4C8 1332 aaPredicted RBP3.84□□□□□ -1.8
AC025539.1-201ENST00000515343 ERICH6Q7L0X2 663 aa3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 JPH4Q96JJ6 628 aa3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 AK7Q96M32 723 aa3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 FBXW7Q969H0 707 aa3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 GOPCQ9HD26 462 aa3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.83□□□□□ -1.8
AC025539.1-201ENST00000515343 EVI5O60447 810 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 SEC24BO95487 1268 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 MLLT3P42568 568 aaPredicted RBP3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 CERKQ8TCT0 537 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 G3V3G9 751 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 DPYSL4O14531 572 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 PCDHGA4Q9Y5G9 962 aa3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 EN1Q05925 392 aaPredicted RBP3.82□□□□□ -1.8
AC025539.1-201ENST00000515343 PSDA5PKW4 1024 aaPredicted RBP3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 MAP2K5Q13163 448 aa3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 PTGDRQ13258 359 aa3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 SLC4A5Q9BY07 1137 aa3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 NPDC1Q9NQX5 325 aaPredicted RBP3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 BRPF1P55201 1214 aaPredicted RBP3.81□□□□□ -1.8
AC025539.1-201ENST00000515343 DOK7Q18PE1 504 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 GPR153Q6NV75 609 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 FCHSD2O94868 740 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 PRIM1P49642 420 aaKnown RBP3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 FOSBP53539 338 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 MAP3K9P80192 1104 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 HIC1Q14526 733 aa3.8□□□□□ -1.8
AC025539.1-201ENST00000515343 SOCS7O14512 581 aa3.79□□□□□ -1.8
AC025539.1-201ENST00000515343 POTEB2H3BUK9 544 aa3.79□□□□□ -1.8
AC025539.1-201ENST00000515343 TUSC1Q2TAM9 212 aa3.79□□□□□ -1.8
AC025539.1-201ENST00000515343 TYW1BQ6NUM6 668 aa3.79□□□□□ -1.8
AC025539.1-201ENST00000515343 C3orf67Q6ZVT6 689 aa3.79□□□□□ -1.8
AC025539.1-201ENST00000515343 TRIM66O15016 1216 aa3.78□□□□□ -1.8
AC025539.1-201ENST00000515343 IRF6O14896 467 aa3.78□□□□□ -1.8
AC025539.1-201ENST00000515343 HOXB1P14653 301 aaPredicted RBP3.78□□□□□ -1.8
AC025539.1-201ENST00000515343 RBM26Q5T8P6 1007 aaKnown RBP3.78□□□□□ -1.8
AC025539.1-201ENST00000515343 SCUBE2Q9NQ36 999 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms