RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 ARHGAP5Q13017 1502 aa35.73■■■■□ 3.31
PACRGL-233ENST00000515339 ADAMTSL3P82987 1691 aa35.72■■■■□ 3.31
PACRGL-233ENST00000515339 ARID4BQ4LE39 1312 aaPredicted RBP35.7■■■■□ 3.31
PACRGL-233ENST00000515339 BCORL1Q5H9F3 1711 aa35.7■■■■□ 3.31
PACRGL-233ENST00000515339 ZFYVE16Q7Z3T8 1539 aa35.7■■■■□ 3.31
PACRGL-233ENST00000515339 YEATS2Q9ULM3 1422 aa35.69■■■■□ 3.3
PACRGL-233ENST00000515339 CDC42BPBQ9Y5S2 1711 aa35.69■■■■□ 3.3
PACRGL-233ENST00000515339 PREX2Q70Z35 1606 aa35.65■■■■□ 3.3
PACRGL-233ENST00000515339 MAGI2Q86UL8 1455 aa35.64■■■■□ 3.3
PACRGL-233ENST00000515339 SIGLEC1Q9BZZ2 1709 aa35.63■■■■□ 3.29
PACRGL-233ENST00000515339 MADDQ8WXG6 1647 aa35.62■■■■□ 3.29
PACRGL-233ENST00000515339 HECW2Q9P2P5 1572 aa35.62■■■■□ 3.29
PACRGL-233ENST00000515339 CEP162Q5TB80 1403 aa35.61■■■■□ 3.29
PACRGL-233ENST00000515339 PTPRMP28827 1452 aa35.59■■■■□ 3.29
PACRGL-233ENST00000515339 CDC42BPAQ5VT25 1732 aa35.58■■■■□ 3.29
PACRGL-233ENST00000515339 ZNF518AQ6AHZ1 1483 aa35.55■■■■□ 3.28
PACRGL-233ENST00000515339 KDM5CP41229 1560 aa35.52■■■■□ 3.28
PACRGL-233ENST00000515339 AFAP1Q8N556 730 aa35.51■■■■□ 3.28
PACRGL-233ENST00000515339 RIMS1Q86UR5 1692 aaKnown RBP35.5■■■■□ 3.27
PACRGL-233ENST00000515339 ABCC1P33527 1531 aa35.5■■■■□ 3.27
PACRGL-233ENST00000515339 ITSN2Q9NZM3 1697 aa35.48■■■■□ 3.27
PACRGL-233ENST00000515339 ATP10AO60312 1499 aa35.48■■■■□ 3.27
PACRGL-233ENST00000515339 ARHGEF12Q9NZN5 1544 aa35.47■■■■□ 3.27
PACRGL-233ENST00000515339 LOC105371045A0A1W2PR82 267 aa35.45■■■■□ 3.27
PACRGL-233ENST00000515339 C9orf84Q5VXU9 1444 aa35.44■■■■□ 3.26
PACRGL-233ENST00000515339 TRAPPC8Q9Y2L5 1435 aa35.43■■■■□ 3.26
PACRGL-233ENST00000515339 GPATCH8Q9UKJ3 1502 aaKnown RBP35.42■■■■□ 3.26
PACRGL-233ENST00000515339 MTUS2Q5JR59 1369 aa35.42■■■■□ 3.26
PACRGL-233ENST00000515339 MLECQ14165 292 aa35.42■■■■□ 3.26
PACRGL-233ENST00000515339 MYT1LQ9UL68 1186 aa35.41■■■■□ 3.26
PACRGL-233ENST00000515339 SAMD9LQ8IVG5 1584 aa35.39■■■■□ 3.26
PACRGL-233ENST00000515339 ZNF777Q9ULD5 760 aaPredicted RBP35.39■■■■□ 3.26
PACRGL-233ENST00000515339 DIP2CQ9Y2E4 1556 aa35.38■■■■□ 3.25
PACRGL-233ENST00000515339 ABCA6Q8N139 1617 aa35.37■■■■□ 3.25
PACRGL-233ENST00000515339 FER1L4A9Z1Z3 1794 aa35.37■■■■□ 3.25
PACRGL-233ENST00000515339 MLH3Q9UHC1 1453 aa35.35■■■■□ 3.25
PACRGL-233ENST00000515339 EHBP1L1Q8N3D4 1523 aa35.34■■■■□ 3.25
PACRGL-233ENST00000515339 CCNB3Q8WWL7 1395 aa35.34■■■■□ 3.25
PACRGL-233ENST00000515339 SYCP2Q9BX26 1530 aa35.32■■■■□ 3.25
PACRGL-233ENST00000515339 PLPPR3Q6T4P5 718 aa35.3■■■■□ 3.24
PACRGL-233ENST00000515339 KIDINS220Q9ULH0 1771 aa35.29■■■■□ 3.24
PACRGL-233ENST00000515339 CFDP1Q9UEE9 299 aaPredicted RBP35.28■■■■□ 3.24
PACRGL-233ENST00000515339 TIAM1Q13009 1591 aa35.28■■■■□ 3.24
PACRGL-233ENST00000515339 REREQ9P2R6 1566 aa35.27■■■■□ 3.24
PACRGL-233ENST00000515339 HNRNPMP52272 730 aaKnown RBP eCLIP35.24■■■■□ 3.23
PACRGL-233ENST00000515339 PLEKHH2Q8IVE3 1493 aa35.21■■■■□ 3.23
PACRGL-233ENST00000515339 VPS8Q8N3P4 1428 aa35.2■■■■□ 3.23
PACRGL-233ENST00000515339 LMTK3Q96Q04 1460 aa35.2■■■■□ 3.23
PACRGL-233ENST00000515339 KIAA1107Q9UPP5 1409 aa35.19■■■■□ 3.22
PACRGL-233ENST00000515339 SPAG9O60271 1321 aaKnown RBP35.16■■■■□ 3.22
PACRGL-233ENST00000515339 SUPT6HQ7KZ85 1726 aaKnown RBP35.15■■■■□ 3.22
PACRGL-233ENST00000515339 AGLP35573 1532 aa35.15■■■■□ 3.22
PACRGL-233ENST00000515339 ZNF644Q9H582 1327 aaPredicted RBP35.14■■■■□ 3.22
PACRGL-233ENST00000515339 NCOA2Q15596 1464 aa35.13■■■■□ 3.21
PACRGL-233ENST00000515339 ATP7AQ04656 1500 aa35.12■■■■□ 3.21
PACRGL-233ENST00000515339 INO80Q9ULG1 1556 aaPredicted RBP35.12■■■■□ 3.21
PACRGL-233ENST00000515339 CEBPAP49715 358 aaPredicted RBP35.08■■■■□ 3.21
PACRGL-233ENST00000515339 LRRC9Q6ZRR7 1453 aa35.03■■■■□ 3.2
PACRGL-233ENST00000515339 MBD5Q9P267 1494 aa35.03■■■■□ 3.2
PACRGL-233ENST00000515339 HSPA2P54652 639 aa35.03■■■■□ 3.2
PACRGL-233ENST00000515339 C3P01024 1663 aa34.99■■■■□ 3.19
PACRGL-233ENST00000515339 PREX1Q8TCU6 1659 aa34.98■■■■□ 3.19
PACRGL-233ENST00000515339 CAMSAP2Q08AD1 1489 aa34.98■■■■□ 3.19
PACRGL-233ENST00000515339 PLXNC1O60486 1568 aa34.98■■■■□ 3.19
PACRGL-233ENST00000515339 A2MP01023 1474 aa34.97■■■■□ 3.19
PACRGL-233ENST00000515339 ESF1Q9H501 851 aaKnown RBP34.96■■■■□ 3.19
PACRGL-233ENST00000515339 MAP3K1Q13233 1512 aa34.95■■■■□ 3.19
PACRGL-233ENST00000515339 ADGBQ8N7X0 1667 aa34.95■■■■□ 3.18
PACRGL-233ENST00000515339 KANK4Q5T7N3 995 aaPredicted RBP34.93■■■■□ 3.18
PACRGL-233ENST00000515339 CCDC141Q6ZP82 1450 aa34.9■■■■□ 3.18
PACRGL-233ENST00000515339 ILDR1Q86SU0 546 aaPredicted RBP34.89■■■■□ 3.18
PACRGL-233ENST00000515339 CNTLNQ9NXG0 1405 aa34.89■■■■□ 3.18
PACRGL-233ENST00000515339 RTEL1-TNFRSF6BF6WH68 1400 aa34.88■■■■□ 3.17
PACRGL-233ENST00000515339 SETD1BQ9UPS6 1966 aaKnown RBP34.86■■■■□ 3.17
PACRGL-233ENST00000515339 MROH2AA6NES4 1674 aa34.85■■■■□ 3.17
PACRGL-233ENST00000515339 UHRF1BP1Q6BDS2 1440 aa34.83■■■■□ 3.17
PACRGL-233ENST00000515339 ARHGEF5Q12774 1597 aa34.83■■■■□ 3.17
PACRGL-233ENST00000515339 CLTCQ00610 1675 aaKnown RBP34.82■■■■□ 3.17
PACRGL-233ENST00000515339 GGT6Q6P531 493 aa34.79■■■■□ 3.16
PACRGL-233ENST00000515339 RSPH4AQ5TD94 716 aa34.78■■■■□ 3.16
PACRGL-233ENST00000515339 MYOM3Q5VTT5 1437 aa34.77■■■■□ 3.16
PACRGL-233ENST00000515339 DHX29Q7Z478 1369 aaKnown RBP34.76■■■■□ 3.16
PACRGL-233ENST00000515339 ZMYM3Q14202 1370 aa34.75■■■■□ 3.15
PACRGL-233ENST00000515339 APLP2Q06481 763 aa34.73■■■■□ 3.15
PACRGL-233ENST00000515339 MIA2Q96PC5 1412 aa34.7■■■■□ 3.15
PACRGL-233ENST00000515339 STRCQ7RTU9 1775 aa34.69■■■■□ 3.14
PACRGL-233ENST00000515339 TSPY4P0CV99 314 aa34.69■■■■□ 3.14
PACRGL-233ENST00000515339 TSPY10P0CW01 314 aa34.69■■■■□ 3.14
PACRGL-233ENST00000515339 NPATQ14207 1427 aa34.68■■■■□ 3.14
PACRGL-233ENST00000515339 KIF3BO15066 747 aa34.65■■■■□ 3.14
PACRGL-233ENST00000515339 MAST1Q9Y2H9 1570 aa34.65■■■■□ 3.14
PACRGL-233ENST00000515339 PPP6R1Q9UPN7 881 aa34.64■■■■□ 3.14
PACRGL-233ENST00000515339 PTPRKQ15262 1439 aa34.61■■■■□ 3.13
PACRGL-233ENST00000515339 MYO3AQ8NEV4 1616 aa34.58■■■■□ 3.13
PACRGL-233ENST00000515339 PTPN23Q9H3S7 1636 aa34.58■■■■□ 3.13
PACRGL-233ENST00000515339 KDM5DQ9BY66 1539 aa34.55■■■■□ 3.12
PACRGL-233ENST00000515339 FBXO41Q8TF61 875 aa34.53■■■■□ 3.12
PACRGL-233ENST00000515339 CROCC2H7BZ55 1655 aa34.52■■■■□ 3.12
PACRGL-233ENST00000515339 ZNF142P52746 1687 aaPredicted RBP34.52■■■■□ 3.12
PACRGL-233ENST00000515339 DMRT2Q9Y5R5 561 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms