RNA–Protein interactions for RNA: ENST00000515267.2

RFPL4AP3-201, Transcript of ret finger protein like 4A pseudogene 3, humanhuman

BASIC

Gene RFPL4AP3, Length 345 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AP3-201ENST00000515267 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
RFPL4AP3-201ENST00000515267 PATL2C9JE40 543 aaKnown RBP8.95□□□□□ -0.98
RFPL4AP3-201ENST00000515267 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
RFPL4AP3-201ENST00000515267 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
RFPL4AP3-201ENST00000515267 PROSER2Q86WR7 435 aaPredicted RBP8.94□□□□□ -0.98
RFPL4AP3-201ENST00000515267 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
RFPL4AP3-201ENST00000515267 PDE4CQ08493 712 aa8.92□□□□□ -0.98
RFPL4AP3-201ENST00000515267 RETREG2Q8NC44 543 aa8.92□□□□□ -0.98
RFPL4AP3-201ENST00000515267 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
RFPL4AP3-201ENST00000515267 PYGBP11216 843 aa8.91□□□□□ -0.98
RFPL4AP3-201ENST00000515267 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
RFPL4AP3-201ENST00000515267 MCM6Q14566 821 aa8.9□□□□□ -0.98
RFPL4AP3-201ENST00000515267 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
RFPL4AP3-201ENST00000515267 ZNF777Q9ULD5 760 aaPredicted RBP8.89□□□□□ -0.99
RFPL4AP3-201ENST00000515267 PCMTD1Q96MG8 357 aaPredicted RBP8.88□□□□□ -0.99
RFPL4AP3-201ENST00000515267 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
RFPL4AP3-201ENST00000515267 MFSD10Q14728 455 aa8.87□□□□□ -0.99
RFPL4AP3-201ENST00000515267 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
RFPL4AP3-201ENST00000515267 RASEFQ8IZ41 740 aa8.86□□□□□ -0.99
RFPL4AP3-201ENST00000515267 PDE4AP27815 886 aa8.85□□□□□ -0.99
RFPL4AP3-201ENST00000515267 AMHR2Q16671 573 aa8.85□□□□□ -0.99
RFPL4AP3-201ENST00000515267 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
RFPL4AP3-201ENST00000515267 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
RFPL4AP3-201ENST00000515267 LARP6Q9BRS8 491 aaKnown RBP8.84□□□□□ -0.99
RFPL4AP3-201ENST00000515267 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 PPP1R15AO75807 674 aaPredicted RBP8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 CAMK2BQ13554 666 aa8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 IRF5Q13568 498 aa8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
RFPL4AP3-201ENST00000515267 FNBP4Q8N3X1 1017 aaPredicted RBP8.82□□□□□ -1
RFPL4AP3-201ENST00000515267 DDX27Q96GQ7 796 aaKnown RBP8.82□□□□□ -1
RFPL4AP3-201ENST00000515267 PPP1R37O75864 691 aa8.81□□□□□ -1
RFPL4AP3-201ENST00000515267 NLRP6P59044 892 aa8.81□□□□□ -1
RFPL4AP3-201ENST00000515267 MAP2K5Q13163 448 aa8.8□□□□□ -1
RFPL4AP3-201ENST00000515267 RSPH4AQ5TD94 716 aa8.8□□□□□ -1
RFPL4AP3-201ENST00000515267 CCDC102AQ96A19 550 aa8.8□□□□□ -1
RFPL4AP3-201ENST00000515267 PLSCR2Q9NRY7 297 aa8.8□□□□□ -1
RFPL4AP3-201ENST00000515267 USP35Q9P2H5 1018 aa8.8□□□□□ -1
RFPL4AP3-201ENST00000515267 KCNA1Q09470 495 aa8.79□□□□□ -1
RFPL4AP3-201ENST00000515267 MNX1P50219 401 aaPredicted RBP8.78□□□□□ -1
RFPL4AP3-201ENST00000515267 GPR37O15354 613 aa8.77□□□□□ -1.01
RFPL4AP3-201ENST00000515267 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
RFPL4AP3-201ENST00000515267 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
RFPL4AP3-201ENST00000515267 ACIN1Q9UKV3 1341 aaKnown RBP8.76□□□□□ -1.01
RFPL4AP3-201ENST00000515267 IRF6O14896 467 aa8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 SOX12O15370 315 aa8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 TTLL12Q14166 644 aaPredicted RBP8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 SH3D19Q5HYK7 790 aa8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 CREBZFQ9NS37 354 aa8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 MYT1LQ9UL68 1186 aa8.74□□□□□ -1.01
RFPL4AP3-201ENST00000515267 BRD1O95696 1058 aa8.73□□□□□ -1.01
RFPL4AP3-201ENST00000515267 POM121Q96HA1 1249 aa8.73□□□□□ -1.01
RFPL4AP3-201ENST00000515267 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
RFPL4AP3-201ENST00000515267 PSEN1P49768 467 aa8.71□□□□□ -1.02
RFPL4AP3-201ENST00000515267 CCDC27Q2M243 656 aa8.71□□□□□ -1.02
RFPL4AP3-201ENST00000515267 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
RFPL4AP3-201ENST00000515267 USTQ9Y2C2 406 aa8.7□□□□□ -1.02
RFPL4AP3-201ENST00000515267 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
RFPL4AP3-201ENST00000515267 C1QBPQ07021 282 aaKnown RBP8.69□□□□□ -1.02
RFPL4AP3-201ENST00000515267 RNF39Q9H2S5 420 aa8.69□□□□□ -1.02
RFPL4AP3-201ENST00000515267 ZNF330Q9Y3S2 320 aaPredicted RBP8.69□□□□□ -1.02
RFPL4AP3-201ENST00000515267 PDIA6Q15084 440 aa8.68□□□□□ -1.02
RFPL4AP3-201ENST00000515267 SPDYE1Q8NFV5 336 aaPredicted RBP8.68□□□□□ -1.02
RFPL4AP3-201ENST00000515267 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
RFPL4AP3-201ENST00000515267 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
RFPL4AP3-201ENST00000515267 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
RFPL4AP3-201ENST00000515267 COG6Q9Y2V7 657 aa8.67□□□□□ -1.02
RFPL4AP3-201ENST00000515267 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
RFPL4AP3-201ENST00000515267 GNPATO15228 680 aa8.65□□□□□ -1.02
RFPL4AP3-201ENST00000515267 PCDHB8Q9UN66 801 aa8.65□□□□□ -1.02
RFPL4AP3-201ENST00000515267 PCDHB13Q9Y5F0 798 aa8.65□□□□□ -1.02
RFPL4AP3-201ENST00000515267 DSG3P32926 999 aa8.64□□□□□ -1.03
RFPL4AP3-201ENST00000515267 FAM177A1Q8N128 213 aaPredicted RBP8.64□□□□□ -1.03
RFPL4AP3-201ENST00000515267 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
RFPL4AP3-201ENST00000515267 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
RFPL4AP3-201ENST00000515267 MS4A1P11836 297 aa8.63□□□□□ -1.03
RFPL4AP3-201ENST00000515267 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
RFPL4AP3-201ENST00000515267 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
RFPL4AP3-201ENST00000515267 NUTM2FA1L443 756 aa8.62□□□□□ -1.03
RFPL4AP3-201ENST00000515267 HIC1Q14526 733 aa8.62□□□□□ -1.03
RFPL4AP3-201ENST00000515267 DPYSL4O14531 572 aa8.61□□□□□ -1.03
RFPL4AP3-201ENST00000515267 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
RFPL4AP3-201ENST00000515267 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
RFPL4AP3-201ENST00000515267 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
RFPL4AP3-201ENST00000515267 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
RFPL4AP3-201ENST00000515267 FCHSD2O94868 740 aa8.6□□□□□ -1.03
RFPL4AP3-201ENST00000515267 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
RFPL4AP3-201ENST00000515267 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
RFPL4AP3-201ENST00000515267 OXER1Q8TDS5 423 aa8.6□□□□□ -1.03
RFPL4AP3-201ENST00000515267 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
RFPL4AP3-201ENST00000515267 CCDC125Q86Z20 511 aa8.59□□□□□ -1.03
RFPL4AP3-201ENST00000515267 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
RFPL4AP3-201ENST00000515267 IVNS1ABPQ9Y6Y0 642 aa8.58□□□□□ -1.04
RFPL4AP3-201ENST00000515267 IGSF5Q9NSI5 407 aa8.56□□□□□ -1.04
RFPL4AP3-201ENST00000515267 GLMNQ92990 594 aa8.55□□□□□ -1.04
RFPL4AP3-201ENST00000515267 CLCN1P35523 988 aa8.54□□□□□ -1.04
RFPL4AP3-201ENST00000515267 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
RFPL4AP3-201ENST00000515267 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
RFPL4AP3-201ENST00000515267 EMILIN3Q9NT22 766 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms