RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
PRDM5-212ENST00000515109 CCER2I3L3R5 266 aa24.59■■□□□ 1.53
PRDM5-212ENST00000515109 ZNF644Q9H582 1327 aaPredicted RBP24.59■■□□□ 1.53
PRDM5-212ENST00000515109 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
PRDM5-212ENST00000515109 TROQ12816 1431 aaPredicted RBP24.58■■□□□ 1.53
PRDM5-212ENST00000515109 PLB1Q6P1J6 1458 aa24.57■■□□□ 1.52
PRDM5-212ENST00000515109 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
PRDM5-212ENST00000515109 FBLN2P98095 1184 aa24.55■■□□□ 1.52
PRDM5-212ENST00000515109 ADCY10Q96PN6 1610 aa24.54■■□□□ 1.52
PRDM5-212ENST00000515109 CARMIL2Q6F5E8 1435 aa24.53■■□□□ 1.52
PRDM5-212ENST00000515109 CAMSAP2Q08AD1 1489 aa24.53■■□□□ 1.52
PRDM5-212ENST00000515109 NUP160Q12769 1436 aa24.53■■□□□ 1.52
PRDM5-212ENST00000515109 KIF14Q15058 1648 aa24.52■■□□□ 1.52
PRDM5-212ENST00000515109 FOXD1Q16676 465 aa24.52■■□□□ 1.52
PRDM5-212ENST00000515109 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
PRDM5-212ENST00000515109 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
PRDM5-212ENST00000515109 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
PRDM5-212ENST00000515109 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
PRDM5-212ENST00000515109 CFDP1Q9UEE9 299 aaPredicted RBP24.47■■□□□ 1.51
PRDM5-212ENST00000515109 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
PRDM5-212ENST00000515109 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
PRDM5-212ENST00000515109 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
PRDM5-212ENST00000515109 RPRD2Q5VT52 1461 aaKnown RBP24.46■■□□□ 1.51
PRDM5-212ENST00000515109 EIF4G2P78344 907 aaKnown RBP eCLIP24.44■■□□□ 1.5
PRDM5-212ENST00000515109 SLC4A1APQ9BWU0 796 aaKnown RBP24.43■■□□□ 1.5
PRDM5-212ENST00000515109 WASHC2AQ641Q2 1341 aa24.41■■□□□ 1.5
PRDM5-212ENST00000515109 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
PRDM5-212ENST00000515109 ABCA8O94911 1581 aa24.41■■□□□ 1.5
PRDM5-212ENST00000515109 NCOA1Q15788 1441 aa24.4■■□□□ 1.5
PRDM5-212ENST00000515109 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
PRDM5-212ENST00000515109 ADGRL2O95490 1459 aa24.39■■□□□ 1.5
PRDM5-212ENST00000515109 PZPP20742 1482 aa24.39■■□□□ 1.49
PRDM5-212ENST00000515109 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.49
PRDM5-212ENST00000515109 ATP10BO94823 1461 aa24.32■■□□□ 1.48
PRDM5-212ENST00000515109 PLEKHD1A6NEE1 506 aa24.32■■□□□ 1.48
PRDM5-212ENST00000515109 NBPF8Q3BBV2 869 aa24.32■■□□□ 1.48
PRDM5-212ENST00000515109 ANKRD30AQ9BXX3 1397 aa24.32■■□□□ 1.48
PRDM5-212ENST00000515109 CNTLNQ9NXG0 1405 aa24.31■■□□□ 1.48
PRDM5-212ENST00000515109 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
PRDM5-212ENST00000515109 POLR1AO95602 1720 aaPredicted RBP24.28■■□□□ 1.48
PRDM5-212ENST00000515109 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
PRDM5-212ENST00000515109 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
PRDM5-212ENST00000515109 FKBP8Q14318 412 aa24.27■■□□□ 1.48
PRDM5-212ENST00000515109 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
PRDM5-212ENST00000515109 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
PRDM5-212ENST00000515109 C11orf95C9JLR9 678 aaPredicted RBP24.24■■□□□ 1.47
PRDM5-212ENST00000515109 C9orf84Q5VXU9 1444 aa24.23■■□□□ 1.47
PRDM5-212ENST00000515109 NEFLP07196 543 aa24.22■■□□□ 1.47
PRDM5-212ENST00000515109 BCANQ96GW7 911 aa24.22■■□□□ 1.47
PRDM5-212ENST00000515109 SPATA31E1Q6ZUB1 1445 aa24.21■■□□□ 1.47
PRDM5-212ENST00000515109 MBD5Q9P267 1494 aa24.21■■□□□ 1.47
PRDM5-212ENST00000515109 PKD2Q13563 968 aa24.21■■□□□ 1.47
PRDM5-212ENST00000515109 PTPRGP23470 1445 aa24.18■■□□□ 1.46
PRDM5-212ENST00000515109 CHD1O14646 1710 aa24.18■■□□□ 1.46
PRDM5-212ENST00000515109 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
PRDM5-212ENST00000515109 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
PRDM5-212ENST00000515109 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
PRDM5-212ENST00000515109 TSPY4P0CV99 314 aa24.14■■□□□ 1.46
PRDM5-212ENST00000515109 TSPY10P0CW01 314 aa24.14■■□□□ 1.46
PRDM5-212ENST00000515109 NUP155O75694 1391 aa24.14■■□□□ 1.45
PRDM5-212ENST00000515109 CDC42BPBQ9Y5S2 1711 aa24.13■■□□□ 1.45
PRDM5-212ENST00000515109 KDM5DQ9BY66 1539 aa24.13■■□□□ 1.45
PRDM5-212ENST00000515109 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
PRDM5-212ENST00000515109 PRKRIP1Q9H875 184 aaPredicted RBP24.12■■□□□ 1.45
PRDM5-212ENST00000515109 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
PRDM5-212ENST00000515109 SAMD9LQ8IVG5 1584 aa24.11■■□□□ 1.45
PRDM5-212ENST00000515109 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
PRDM5-212ENST00000515109 KIF15Q9NS87 1388 aa24.1■■□□□ 1.45
PRDM5-212ENST00000515109 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
PRDM5-212ENST00000515109 CCDC184Q52MB2 194 aa24.08■■□□□ 1.45
PRDM5-212ENST00000515109 USP47Q96K76 1375 aa24.07■■□□□ 1.44
PRDM5-212ENST00000515109 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
PRDM5-212ENST00000515109 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
PRDM5-212ENST00000515109 KDM5CP41229 1560 aa24.06■■□□□ 1.44
PRDM5-212ENST00000515109 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
PRDM5-212ENST00000515109 ARHGEF12Q9NZN5 1544 aa24.04■■□□□ 1.44
PRDM5-212ENST00000515109 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
PRDM5-212ENST00000515109 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
PRDM5-212ENST00000515109 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
PRDM5-212ENST00000515109 TTC37Q6PGP7 1564 aa24.01■■□□□ 1.43
PRDM5-212ENST00000515109 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
PRDM5-212ENST00000515109 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
PRDM5-212ENST00000515109 ARHGAP5Q13017 1502 aa23.98■■□□□ 1.43
PRDM5-212ENST00000515109 FAM135AQ9P2D6 1515 aa23.97■■□□□ 1.43
PRDM5-212ENST00000515109 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
PRDM5-212ENST00000515109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.43
PRDM5-212ENST00000515109 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
PRDM5-212ENST00000515109 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.43
PRDM5-212ENST00000515109 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
PRDM5-212ENST00000515109 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.42
PRDM5-212ENST00000515109 ABCC2Q92887 1545 aa23.94■■□□□ 1.42
PRDM5-212ENST00000515109 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
PRDM5-212ENST00000515109 ARID4BQ4LE39 1312 aaPredicted RBP23.93■■□□□ 1.42
PRDM5-212ENST00000515109 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
PRDM5-212ENST00000515109 UNC13BO14795 1591 aa23.91■■□□□ 1.42
PRDM5-212ENST00000515109 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
PRDM5-212ENST00000515109 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
PRDM5-212ENST00000515109 ZBED9Q6R2W3 1325 aa23.89■■□□□ 1.41
PRDM5-212ENST00000515109 PLXNC1O60486 1568 aa23.88■■□□□ 1.41
PRDM5-212ENST00000515109 PLEKHH2Q8IVE3 1493 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms