RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	POTEM	A6NI47	508 aa		11.55	□□□□□ -0.56
MATR3-223	ENST00000514402	TMC2	Q8TDI7	906 aa		11.55	□□□□□ -0.56
MATR3-223	ENST00000514402	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.54	□□□□□ -0.56
MATR3-223	ENST00000514402	C2orf72	A6NCS6	295 aa		11.52	□□□□□ -0.57
MATR3-223	ENST00000514402	CFAP44	Q96MT7	982 aa		11.52	□□□□□ -0.57
MATR3-223	ENST00000514402	POTEG	Q6S5H5	508 aa		11.51	□□□□□ -0.57
MATR3-223	ENST00000514402	GPHN	Q9NQX3	736 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-223	ENST00000514402	DOK7	Q18PE1	504 aa		11.5	□□□□□ -0.57
MATR3-223	ENST00000514402	PDE4A	P27815	886 aa		11.49	□□□□□ -0.57
MATR3-223	ENST00000514402	CRISPLD2	Q9H0B8	497 aa		11.49	□□□□□ -0.57
MATR3-223	ENST00000514402	FOXK1	P85037	733 aa		11.48	□□□□□ -0.57
MATR3-223	ENST00000514402	RIMBP2	O15034	1052 aa		11.46	□□□□□ -0.57
MATR3-223	ENST00000514402	HOXB3	P14651	431 aa	Predicted RBP	11.45	□□□□□ -0.58
MATR3-223	ENST00000514402	FAM163A	Q96GL9	167 aa	Predicted RBP	11.45	□□□□□ -0.58
MATR3-223	ENST00000514402	ZSWIM6	Q9HCJ5	1215 aa		11.45	□□□□□ -0.58
MATR3-223	ENST00000514402	PCDH10	Q9P2E7	1040 aa		11.44	□□□□□ -0.58
MATR3-223	ENST00000514402	NCKAP5L	Q9HCH0	1330 aa		11.43	□□□□□ -0.58
MATR3-223	ENST00000514402	ST18	O60284	1047 aa		11.42	□□□□□ -0.58
MATR3-223	ENST00000514402	SLC34A2	O95436	690 aa		11.42	□□□□□ -0.58
MATR3-223	ENST00000514402	ZNF710	Q8N1W2	664 aa		11.42	□□□□□ -0.58
MATR3-223	ENST00000514402	MFSD10	Q14728	455 aa		11.41	□□□□□ -0.58
MATR3-223	ENST00000514402	LCE2D	Q5TA82	110 aa	Predicted RBP	11.41	□□□□□ -0.58
MATR3-223	ENST00000514402	PLCB2	Q00722	1185 aa		11.4	□□□□□ -0.58
MATR3-223	ENST00000514402	DSG2	Q14126	1118 aa		11.4	□□□□□ -0.58
MATR3-223	ENST00000514402	CADPS2	Q86UW7	1296 aa		11.39	□□□□□ -0.59
MATR3-223	ENST00000514402	PLPP6	Q8IY26	295 aa		11.39	□□□□□ -0.59
MATR3-223	ENST00000514402	DDX27	Q96GQ7	796 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-223	ENST00000514402	PPP1R15B	Q5SWA1	713 aa		11.38	□□□□□ -0.59
MATR3-223	ENST00000514402	LARP6	Q9BRS8	491 aa	Known RBP	11.37	□□□□□ -0.59
MATR3-223	ENST00000514402	HOXB1	P14653	301 aa	Predicted RBP	11.36	□□□□□ -0.59
MATR3-223	ENST00000514402	GPR153	Q6NV75	609 aa		11.33	□□□□□ -0.6
MATR3-223	ENST00000514402	PTCD2	Q8WV60	388 aa	Known RBP	11.33	□□□□□ -0.6
MATR3-223	ENST00000514402	TBC1D12	O60347	775 aa		11.3	□□□□□ -0.6
MATR3-223	ENST00000514402	PCDHGA4	Q9Y5G9	962 aa		11.29	□□□□□ -0.6
MATR3-223	ENST00000514402	EMP3	P54852	163 aa		11.28	□□□□□ -0.6
MATR3-223	ENST00000514402	TSHZ2	Q9NRE2	1034 aa		11.27	□□□□□ -0.61
MATR3-223	ENST00000514402	CAMK2B	Q13554	666 aa		11.26	□□□□□ -0.61
MATR3-223	ENST00000514402	ARSI	Q5FYB1	569 aa		11.26	□□□□□ -0.61
MATR3-223	ENST00000514402	OXER1	Q8TDS5	423 aa		11.26	□□□□□ -0.61
MATR3-223	ENST00000514402	WDR70	Q9NW82	654 aa		11.26	□□□□□ -0.61
MATR3-223	ENST00000514402	MARVELD3	Q96A59	401 aa		11.24	□□□□□ -0.61
MATR3-223	ENST00000514402	ERBB3	P21860	1342 aa		11.19	□□□□□ -0.62
MATR3-223	ENST00000514402	KDM4F	A0A1W2PPD8	638 aa		11.19	□□□□□ -0.62
MATR3-223	ENST00000514402	NUDT7	P0C024	238 aa		11.19	□□□□□ -0.62
MATR3-223	ENST00000514402	E2F4	Q16254	413 aa		11.19	□□□□□ -0.62
MATR3-223	ENST00000514402	PSD	A5PKW4	1024 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	HS3ST6	Q96QI5	342 aa		11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	EMILIN3	Q9NT22	766 aa		11.18	□□□□□ -0.62
MATR3-223	ENST00000514402	FAM205C	A6NFA0	338 aa		11.17	□□□□□ -0.62
MATR3-223	ENST00000514402	HAP1	P54257	671 aa	Predicted RBP	11.17	□□□□□ -0.62
MATR3-223	ENST00000514402	MAP3K9	P80192	1104 aa		11.17	□□□□□ -0.62
MATR3-223	ENST00000514402	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.16	□□□□□ -0.62
MATR3-223	ENST00000514402	VARS2	Q5ST30	1063 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-223	ENST00000514402	CDAN1	Q8IWY9	1227 aa		11.13	□□□□□ -0.63
MATR3-223	ENST00000514402	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.13	□□□□□ -0.63
MATR3-223	ENST00000514402	LHX6	Q9UPM6	363 aa		11.13	□□□□□ -0.63
MATR3-223	ENST00000514402	EVI5	O60447	810 aa		11.12	□□□□□ -0.63
MATR3-223	ENST00000514402	P3H3	Q8IVL6	736 aa		11.1	□□□□□ -0.63
MATR3-223	ENST00000514402	ZNF687	Q8N1G0	1237 aa		11.1	□□□□□ -0.63
MATR3-223	ENST00000514402	POTEB3	A0JP26	581 aa		11.09	□□□□□ -0.63
MATR3-223	ENST00000514402	POTEB	Q6S5H4	581 aa		11.09	□□□□□ -0.63
MATR3-223	ENST00000514402	VSIG10	Q8N0Z9	540 aa		11.09	□□□□□ -0.63
MATR3-223	ENST00000514402	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.08	□□□□□ -0.64
MATR3-223	ENST00000514402	DPYSL4	O14531	572 aa		11.08	□□□□□ -0.64
MATR3-223	ENST00000514402	PDIA6	Q15084	440 aa		11.07	□□□□□ -0.64
MATR3-223	ENST00000514402	PPP4R3B	Q5MIZ7	849 aa		11.06	□□□□□ -0.64
MATR3-223	ENST00000514402	ARHGEF1	Q92888	912 aa	Known RBP	11.06	□□□□□ -0.64
MATR3-223	ENST00000514402	PBX2	P40425	430 aa		11.05	□□□□□ -0.64
MATR3-223	ENST00000514402	JPH4	Q96JJ6	628 aa		11.05	□□□□□ -0.64
MATR3-223	ENST00000514402	PTGER2	P43116	358 aa		11.04	□□□□□ -0.64
MATR3-223	ENST00000514402	FOSB	P53539	338 aa		11.03	□□□□□ -0.64
MATR3-223	ENST00000514402	KCNV2	Q8TDN2	545 aa		11.02	□□□□□ -0.65
MATR3-223	ENST00000514402	PHF14	O94880	888 aa		11	□□□□□ -0.65
MATR3-223	ENST00000514402	ZNF454	Q8N9F8	522 aa		11	□□□□□ -0.65
MATR3-223	ENST00000514402	EPAS1	Q99814	870 aa		10.98	□□□□□ -0.65
MATR3-223	ENST00000514402	KRTAP3-3	Q9BYR6	98 aa		10.98	□□□□□ -0.65
MATR3-223	ENST00000514402	KRTAP3-2	Q9BYR7	98 aa		10.98	□□□□□ -0.65
MATR3-223	ENST00000514402	KDM2A	Q9Y2K7	1162 aa		10.98	□□□□□ -0.65
MATR3-223	ENST00000514402	FBXW7	Q969H0	707 aa		10.97	□□□□□ -0.65
MATR3-223	ENST00000514402	ZDHHC16	Q969W1	377 aa		10.97	□□□□□ -0.65
MATR3-223	ENST00000514402	KCNH8	Q96L42	1107 aa		10.96	□□□□□ -0.65
MATR3-223	ENST00000514402	BCL2L12	Q9HB09	334 aa		10.96	□□□□□ -0.65
MATR3-223	ENST00000514402	ARHGAP33	O14559	1287 aa		10.95	□□□□□ -0.66
MATR3-223	ENST00000514402	TYW1B	Q6NUM6	668 aa		10.95	□□□□□ -0.66
MATR3-223	ENST00000514402	PCDHGA10	Q9Y5H3	936 aa		10.95	□□□□□ -0.66
MATR3-223	ENST00000514402	PTPRE	P23469	700 aa		10.91	□□□□□ -0.66
MATR3-223	ENST00000514402	POTEE	Q6S8J3	1075 aa		10.91	□□□□□ -0.66
MATR3-223	ENST00000514402	LSM11	P83369	360 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
MATR3-223	ENST00000514402	DDX12P	Q92771	950 aa		10.9	□□□□□ -0.66
MATR3-223	ENST00000514402	ADAM33	Q9BZ11	813 aa		10.89	□□□□□ -0.67
MATR3-223	ENST00000514402	TK2	O00142	265 aa		10.87	□□□□□ -0.67
MATR3-223	ENST00000514402	NBR1	Q14596	966 aa		10.87	□□□□□ -0.67
MATR3-223	ENST00000514402	AXIN2	Q9Y2T1	843 aa		10.87	□□□□□ -0.67
MATR3-223	ENST00000514402	EN1	Q05925	392 aa	Predicted RBP	10.86	□□□□□ -0.67
MATR3-223	ENST00000514402	SPNS2	Q8IVW8	549 aa		10.86	□□□□□ -0.67
MATR3-223	ENST00000514402	KCNK17	Q96T54	332 aa		10.86	□□□□□ -0.67
MATR3-223	ENST00000514402	SLC4A5	Q9BY07	1137 aa		10.86	□□□□□ -0.67

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