RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	ARHGEF40	Q8TER5	1519 aa		10.82	□□□□□ -0.68
RACK1-231	ENST00000514183	RIMS1	Q86UR5	1692 aa	Known RBP	10.82	□□□□□ -0.68
RACK1-231	ENST00000514183	EFCAB5	A4FU69	1503 aa		10.81	□□□□□ -0.68
RACK1-231	ENST00000514183	CERK	Q8TCT0	537 aa		10.81	□□□□□ -0.68
RACK1-231	ENST00000514183	FHOD3	Q2V2M9	1422 aa		10.81	□□□□□ -0.68
RACK1-231	ENST00000514183	SETD1B	Q9UPS6	1966 aa	Known RBP	10.8	□□□□□ -0.68
RACK1-231	ENST00000514183	RICTOR	Q6R327	1708 aa		10.79	□□□□□ -0.68
RACK1-231	ENST00000514183	SAMD9	Q5K651	1589 aa		10.79	□□□□□ -0.68
RACK1-231	ENST00000514183	SLC4A2	P04920	1241 aa		10.79	□□□□□ -0.68
RACK1-231	ENST00000514183	ARID3C	A6NKF2	412 aa		10.78	□□□□□ -0.68
RACK1-231	ENST00000514183	P3H3	Q8IVL6	736 aa		10.78	□□□□□ -0.68
RACK1-231	ENST00000514183	ZMYM4	Q5VZL5	1548 aa		10.78	□□□□□ -0.68
RACK1-231	ENST00000514183	FRMPD1	Q5SYB0	1578 aa		10.78	□□□□□ -0.68
RACK1-231	ENST00000514183	LOC105371045	A0A1W2PR82	267 aa		10.77	□□□□□ -0.68
RACK1-231	ENST00000514183	ZFYVE16	Q7Z3T8	1539 aa		10.76	□□□□□ -0.69
RACK1-231	ENST00000514183	FER1L4	A9Z1Z3	1794 aa		10.76	□□□□□ -0.69
RACK1-231	ENST00000514183	PREX1	Q8TCU6	1659 aa		10.75	□□□□□ -0.69
RACK1-231	ENST00000514183	TTC37	Q6PGP7	1564 aa		10.74	□□□□□ -0.69
RACK1-231	ENST00000514183	HSPA2	P54652	639 aa		10.74	□□□□□ -0.69
RACK1-231	ENST00000514183	NUP153	P49790	1475 aa	Known RBP	10.74	□□□□□ -0.69
RACK1-231	ENST00000514183	SOCS7	O14512	581 aa		10.73	□□□□□ -0.69
RACK1-231	ENST00000514183	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.73	□□□□□ -0.69
RACK1-231	ENST00000514183	EEA1	Q15075	1411 aa		10.73	□□□□□ -0.69
RACK1-231	ENST00000514183	YEATS2	Q9ULM3	1422 aa		10.73	□□□□□ -0.69
RACK1-231	ENST00000514183	DISP3	Q9P2K9	1392 aa		10.72	□□□□□ -0.69
RACK1-231	ENST00000514183	ATP10A	O60312	1499 aa		10.71	□□□□□ -0.69
RACK1-231	ENST00000514183	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.7	□□□□□ -0.7	4e-34	■□□□□ 9.7
RACK1-231	ENST00000514183	EFCAB2	Q5VUJ9	269 aa		10.7	□□□□□ -0.7
RACK1-231	ENST00000514183	C9orf84	Q5VXU9	1444 aa		10.7	□□□□□ -0.7
RACK1-231	ENST00000514183	ESF1	Q9H501	851 aa	Known RBP	10.69	□□□□□ -0.7
RACK1-231	ENST00000514183	PLCH2	O75038	1416 aa		10.69	□□□□□ -0.7
RACK1-231	ENST00000514183	UHRF1BP1	Q6BDS2	1440 aa		10.69	□□□□□ -0.7
RACK1-231	ENST00000514183	SCAPER	Q9BY12	1400 aa		10.69	□□□□□ -0.7
RACK1-231	ENST00000514183	HECW1	Q76N89	1606 aa		10.68	□□□□□ -0.7
RACK1-231	ENST00000514183	MLEC	Q14165	292 aa		10.68	□□□□□ -0.7
RACK1-231	ENST00000514183	ARHGEF12	Q9NZN5	1544 aa		10.68	□□□□□ -0.7
RACK1-231	ENST00000514183	IQSEC2	Q5JU85	1478 aa		10.67	□□□□□ -0.7
RACK1-231	ENST00000514183	MYO5C	Q9NQX4	1742 aa		10.67	□□□□□ -0.7
RACK1-231	ENST00000514183	ZNF518A	Q6AHZ1	1483 aa		10.67	□□□□□ -0.7
RACK1-231	ENST00000514183	PTPRT	O14522	1441 aa		10.66	□□□□□ -0.7
RACK1-231	ENST00000514183	FMN1	Q68DA7	1419 aa		10.64	□□□□□ -0.71
RACK1-231	ENST00000514183	MYT1L	Q9UL68	1186 aa		10.64	□□□□□ -0.71
RACK1-231	ENST00000514183	STRC	Q7RTU9	1775 aa		10.64	□□□□□ -0.71
RACK1-231	ENST00000514183	RERE	Q9P2R6	1566 aa		10.63	□□□□□ -0.71
RACK1-231	ENST00000514183	CLIP1	P30622	1438 aa		10.62	□□□□□ -0.71
RACK1-231	ENST00000514183	SPATA31D1	Q6ZQQ2	1576 aa		10.62	□□□□□ -0.71
RACK1-231	ENST00000514183	CNTLN	Q9NXG0	1405 aa		10.62	□□□□□ -0.71
RACK1-231	ENST00000514183	RANGAP1	P46060	587 aa	Predicted RBP	10.61	□□□□□ -0.71
RACK1-231	ENST00000514183	SIGLEC1	Q9BZZ2	1709 aa		10.61	□□□□□ -0.71
RACK1-231	ENST00000514183	MYCN	P04198	464 aa	Predicted RBP	10.6	□□□□□ -0.71
RACK1-231	ENST00000514183	KIF14	Q15058	1648 aa		10.6	□□□□□ -0.71
RACK1-231	ENST00000514183	TRAPPC8	Q9Y2L5	1435 aa		10.6	□□□□□ -0.71
RACK1-231	ENST00000514183	KDM5C	P41229	1560 aa		10.6	□□□□□ -0.71
RACK1-231	ENST00000514183	AGL	P35573	1532 aa		10.59	□□□□□ -0.71
RACK1-231	ENST00000514183	ARHGAP5	Q13017	1502 aa		10.59	□□□□□ -0.71
RACK1-231	ENST00000514183	CEBPA	P49715	358 aa	Predicted RBP	10.58	□□□□□ -0.72
RACK1-231	ENST00000514183	ILDR2	Q71H61	639 aa		10.58	□□□□□ -0.72
RACK1-231	ENST00000514183	MLH3	Q9UHC1	1453 aa		10.58	□□□□□ -0.72
RACK1-231	ENST00000514183	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.58	□□□□□ -0.72
RACK1-231	ENST00000514183	C3	P01024	1663 aa		10.57	□□□□□ -0.72
RACK1-231	ENST00000514183	DCAF8L1	A6NGE4	600 aa		10.57	□□□□□ -0.72
RACK1-231	ENST00000514183	CDK13	Q14004	1512 aa	Known RBP	10.56	□□□□□ -0.72
RACK1-231	ENST00000514183	TRO	Q12816	1431 aa	Predicted RBP	10.56	□□□□□ -0.72
RACK1-231	ENST00000514183	NPAT	Q14207	1427 aa		10.56	□□□□□ -0.72
RACK1-231	ENST00000514183	AFAP1	Q8N556	730 aa		10.55	□□□□□ -0.72
RACK1-231	ENST00000514183	DIP2C	Q9Y2E4	1556 aa		10.55	□□□□□ -0.72
RACK1-231	ENST00000514183	MROH2A	A6NES4	1674 aa		10.54	□□□□□ -0.72
RACK1-231	ENST00000514183	PKD2	Q13563	968 aa		10.54	□□□□□ -0.72
RACK1-231	ENST00000514183	NCOA1	Q15788	1441 aa		10.54	□□□□□ -0.72
RACK1-231	ENST00000514183	LTBP4	Q8N2S1	1624 aa		10.53	□□□□□ -0.72
RACK1-231	ENST00000514183	UBTF	P17480	764 aa	Known RBP	10.52	□□□□□ -0.73
RACK1-231	ENST00000514183	CDC42BPB	Q9Y5S2	1711 aa		10.52	□□□□□ -0.73
RACK1-231	ENST00000514183	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.51	□□□□□ -0.73
RACK1-231	ENST00000514183	CCDC18	Q5T9S5	1454 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	PREX2	Q70Z35	1606 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	ABCA6	Q8N139	1617 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	UBAP1L	F5GYI3	381 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	ATXN8OS	P0DMR3	200 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	PLA2R1	Q13018	1463 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	CAMSAP1	Q5T5Y3	1602 aa		10.5	□□□□□ -0.73
RACK1-231	ENST00000514183	ITSN2	Q9NZM3	1697 aa		10.49	□□□□□ -0.73
RACK1-231	ENST00000514183	ABCC1	P33527	1531 aa		10.49	□□□□□ -0.73
RACK1-231	ENST00000514183	ZMYM3	Q14202	1370 aa		10.48	□□□□□ -0.73
RACK1-231	ENST00000514183	KIDINS220	Q9ULH0	1771 aa		10.47	□□□□□ -0.73
RACK1-231	ENST00000514183	TOM1	O60784	492 aa		10.47	□□□□□ -0.73
RACK1-231	ENST00000514183	FKBP8	Q14318	412 aa		10.47	□□□□□ -0.73
RACK1-231	ENST00000514183	PLEKHH2	Q8IVE3	1493 aa		10.46	□□□□□ -0.73
RACK1-231	ENST00000514183	ZNF142	P52746	1687 aa	Predicted RBP	10.46	□□□□□ -0.73
RACK1-231	ENST00000514183	ARHGAP35	Q9NRY4	1499 aa		10.46	□□□□□ -0.74
RACK1-231	ENST00000514183	CEP162	Q5TB80	1403 aa		10.46	□□□□□ -0.74
RACK1-231	ENST00000514183	SPAG9	O60271	1321 aa	Known RBP	10.45	□□□□□ -0.74
RACK1-231	ENST00000514183	CDC42BPA	Q5VT25	1732 aa		10.44	□□□□□ -0.74
RACK1-231	ENST00000514183	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RACK1-231	ENST00000514183	CASKIN1	Q8WXD9	1431 aa		10.43	□□□□□ -0.74
RACK1-231	ENST00000514183	KIAA1107	Q9UPP5	1409 aa		10.43	□□□□□ -0.74
RACK1-231	ENST00000514183	CPS1	P31327	1500 aa		10.43	□□□□□ -0.74
RACK1-231	ENST00000514183	TCOF1	Q13428	1488 aa	Known RBP	10.43	□□□□□ -0.74
RACK1-231	ENST00000514183	SAMD9L	Q8IVG5	1584 aa		10.42	□□□□□ -0.74
RACK1-231	ENST00000514183	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.42	□□□□□ -0.74
RACK1-231	ENST00000514183	MYO3A	Q8NEV4	1616 aa		10.42	□□□□□ -0.74

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