RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
NFKB1-211ENST00000513803 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
NFKB1-211ENST00000513803 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
NFKB1-211ENST00000513803 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
NFKB1-211ENST00000513803 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.55
NFKB1-211ENST00000513803 ARHGEF12Q9NZN5 1544 aa18.46■□□□□ 0.55
NFKB1-211ENST00000513803 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
NFKB1-211ENST00000513803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.54
NFKB1-211ENST00000513803 PTPRTO14522 1441 aa18.45■□□□□ 0.54
NFKB1-211ENST00000513803 SIGLEC1Q9BZZ2 1709 aa18.45■□□□□ 0.54
NFKB1-211ENST00000513803 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
NFKB1-211ENST00000513803 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
NFKB1-211ENST00000513803 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
NFKB1-211ENST00000513803 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
NFKB1-211ENST00000513803 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
NFKB1-211ENST00000513803 PLCH2O75038 1416 aa18.41■□□□□ 0.54
NFKB1-211ENST00000513803 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
NFKB1-211ENST00000513803 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
NFKB1-211ENST00000513803 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
NFKB1-211ENST00000513803 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
NFKB1-211ENST00000513803 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
NFKB1-211ENST00000513803 UBAP1LF5GYI3 381 aa18.32■□□□□ 0.52
NFKB1-211ENST00000513803 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
NFKB1-211ENST00000513803 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
NFKB1-211ENST00000513803 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
NFKB1-211ENST00000513803 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
NFKB1-211ENST00000513803 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
NFKB1-211ENST00000513803 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
NFKB1-211ENST00000513803 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
NFKB1-211ENST00000513803 ZNF335Q9H4Z2 1342 aaPredicted RBP18.22■□□□□ 0.51
NFKB1-211ENST00000513803 C3P01024 1663 aa18.22■□□□□ 0.51
NFKB1-211ENST00000513803 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
NFKB1-211ENST00000513803 KDM5CP41229 1560 aa18.2■□□□□ 0.5
NFKB1-211ENST00000513803 REREQ9P2R6 1566 aa18.2■□□□□ 0.5
NFKB1-211ENST00000513803 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
NFKB1-211ENST00000513803 PKD2Q13563 968 aa18.19■□□□□ 0.5
NFKB1-211ENST00000513803 MYO5CQ9NQX4 1742 aa18.19■□□□□ 0.5
NFKB1-211ENST00000513803 AGLP35573 1532 aa18.18■□□□□ 0.5
NFKB1-211ENST00000513803 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
NFKB1-211ENST00000513803 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
NFKB1-211ENST00000513803 NPATQ14207 1427 aa18.17■□□□□ 0.5
NFKB1-211ENST00000513803 CAMSAP1Q5T5Y3 1602 aa18.17■□□□□ 0.5
NFKB1-211ENST00000513803 EEA1Q15075 1411 aa18.15■□□□□ 0.5
NFKB1-211ENST00000513803 ZMYM3Q14202 1370 aa18.14■□□□□ 0.49
NFKB1-211ENST00000513803 CLIP1P30622 1438 aa18.14■□□□□ 0.49
NFKB1-211ENST00000513803 FMN1Q68DA7 1419 aa18.14■□□□□ 0.49
NFKB1-211ENST00000513803 HSPA1LP34931 641 aa18.13■□□□□ 0.49
NFKB1-211ENST00000513803 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
NFKB1-211ENST00000513803 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
NFKB1-211ENST00000513803 TOM1O60784 492 aa18.12■□□□□ 0.49
NFKB1-211ENST00000513803 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
NFKB1-211ENST00000513803 KIF14Q15058 1648 aa18.11■□□□□ 0.49
NFKB1-211ENST00000513803 ABCA6Q8N139 1617 aa18.11■□□□□ 0.49
NFKB1-211ENST00000513803 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
NFKB1-211ENST00000513803 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
NFKB1-211ENST00000513803 PLA2R1Q13018 1463 aa18.08■□□□□ 0.49
NFKB1-211ENST00000513803 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
NFKB1-211ENST00000513803 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
NFKB1-211ENST00000513803 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
NFKB1-211ENST00000513803 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
NFKB1-211ENST00000513803 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
NFKB1-211ENST00000513803 ABCC1P33527 1531 aa18.01■□□□□ 0.47
NFKB1-211ENST00000513803 KIDINS220Q9ULH0 1771 aa18.01■□□□□ 0.47
NFKB1-211ENST00000513803 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
NFKB1-211ENST00000513803 PTPRKQ15262 1439 aa17.99■□□□□ 0.47
NFKB1-211ENST00000513803 GGT6Q6P531 493 aa17.99■□□□□ 0.47
NFKB1-211ENST00000513803 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
NFKB1-211ENST00000513803 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
NFKB1-211ENST00000513803 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
NFKB1-211ENST00000513803 CPS1P31327 1500 aa17.96■□□□□ 0.47
NFKB1-211ENST00000513803 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
NFKB1-211ENST00000513803 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.46
NFKB1-211ENST00000513803 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
NFKB1-211ENST00000513803 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
NFKB1-211ENST00000513803 PREX2Q70Z35 1606 aa17.94■□□□□ 0.46
NFKB1-211ENST00000513803 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
NFKB1-211ENST00000513803 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
NFKB1-211ENST00000513803 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
NFKB1-211ENST00000513803 SAMD9LQ8IVG5 1584 aa17.93■□□□□ 0.46
NFKB1-211ENST00000513803 ANKLE2Q86XL3 938 aa17.92■□□□□ 0.46
NFKB1-211ENST00000513803 A2ML1A8K2U0 1454 aa17.92■□□□□ 0.46
NFKB1-211ENST00000513803 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
NFKB1-211ENST00000513803 A2MP01023 1474 aa17.9■□□□□ 0.46
NFKB1-211ENST00000513803 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
NFKB1-211ENST00000513803 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
NFKB1-211ENST00000513803 KIAA1107Q9UPP5 1409 aa17.87■□□□□ 0.45
NFKB1-211ENST00000513803 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
NFKB1-211ENST00000513803 CFDP1Q9UEE9 299 aaPredicted RBP17.86■□□□□ 0.45
NFKB1-211ENST00000513803 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
NFKB1-211ENST00000513803 SYCP2Q9BX26 1530 aa17.85■□□□□ 0.45
NFKB1-211ENST00000513803 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
NFKB1-211ENST00000513803 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
NFKB1-211ENST00000513803 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
NFKB1-211ENST00000513803 TNRQ92752 1358 aa17.84■□□□□ 0.45
NFKB1-211ENST00000513803 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
NFKB1-211ENST00000513803 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
NFKB1-211ENST00000513803 PLXNC1O60486 1568 aa17.83■□□□□ 0.45
NFKB1-211ENST00000513803 LRRIQ1Q96JM4 1722 aa17.83■□□□□ 0.44
NFKB1-211ENST00000513803 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
NFKB1-211ENST00000513803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms