RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 AKNAQ7Z591 1439 aa15.01□□□□□ -0.01
SNHG4-207ENST00000513259 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
SNHG4-207ENST00000513259 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
SNHG4-207ENST00000513259 HSPA2P54652 639 aa15□□□□□ -0.01
SNHG4-207ENST00000513259 FANCAO15360 1455 aa14.98□□□□□ -0.01
SNHG4-207ENST00000513259 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
SNHG4-207ENST00000513259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.97□□□□□ -0.012e-37■□□□□ 9.1
SNHG4-207ENST00000513259 TTC37Q6PGP7 1564 aa14.95□□□□□ -0.02
SNHG4-207ENST00000513259 CFAP74Q9C0B2 1584 aa14.95□□□□□ -0.02
SNHG4-207ENST00000513259 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
SNHG4-207ENST00000513259 MLECQ14165 292 aa14.95□□□□□ -0.02
SNHG4-207ENST00000513259 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
SNHG4-207ENST00000513259 ZMYM4Q5VZL5 1548 aa14.93□□□□□ -0.02
SNHG4-207ENST00000513259 ZFYVE16Q7Z3T8 1539 aa14.93□□□□□ -0.02
SNHG4-207ENST00000513259 HECW1Q76N89 1606 aa14.92□□□□□ -0.02
SNHG4-207ENST00000513259 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
SNHG4-207ENST00000513259 CERKQ8TCT0 537 aa14.9□□□□□ -0.02
SNHG4-207ENST00000513259 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
SNHG4-207ENST00000513259 CDK13Q14004 1512 aaKnown RBP14.9□□□□□ -0.02
SNHG4-207ENST00000513259 FER1L4A9Z1Z3 1794 aa14.9□□□□□ -0.02
SNHG4-207ENST00000513259 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
SNHG4-207ENST00000513259 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
SNHG4-207ENST00000513259 EEA1Q15075 1411 aa14.88□□□□□ -0.03
SNHG4-207ENST00000513259 PLCH2O75038 1416 aa14.87□□□□□ -0.03
SNHG4-207ENST00000513259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.038e-8■■□□□ 13.5
SNHG4-207ENST00000513259 ATP10AO60312 1499 aa14.85□□□□□ -0.03
SNHG4-207ENST00000513259 CEBPAP49715 358 aaPredicted RBP14.85□□□□□ -0.03
SNHG4-207ENST00000513259 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
SNHG4-207ENST00000513259 ARHGEF12Q9NZN5 1544 aa14.83□□□□□ -0.04
SNHG4-207ENST00000513259 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.04
SNHG4-207ENST00000513259 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
SNHG4-207ENST00000513259 MYO5CQ9NQX4 1742 aa14.82□□□□□ -0.04
SNHG4-207ENST00000513259 PREX1Q8TCU6 1659 aa14.81□□□□□ -0.04
SNHG4-207ENST00000513259 C9orf84Q5VXU9 1444 aa14.81□□□□□ -0.04
SNHG4-207ENST00000513259 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
SNHG4-207ENST00000513259 STRCQ7RTU9 1775 aa14.79□□□□□ -0.04
SNHG4-207ENST00000513259 AFAP1Q8N556 730 aa14.79□□□□□ -0.04
SNHG4-207ENST00000513259 KIF14Q15058 1648 aa14.78□□□□□ -0.04
SNHG4-207ENST00000513259 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
SNHG4-207ENST00000513259 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
SNHG4-207ENST00000513259 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SNHG4-207ENST00000513259 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
SNHG4-207ENST00000513259 SETD1BQ9UPS6 1966 aaKnown RBP14.75□□□□□ -0.05
SNHG4-207ENST00000513259 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
SNHG4-207ENST00000513259 ZNF518AQ6AHZ1 1483 aa14.75□□□□□ -0.05
SNHG4-207ENST00000513259 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
SNHG4-207ENST00000513259 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
SNHG4-207ENST00000513259 KDM5CP41229 1560 aa14.73□□□□□ -0.05
SNHG4-207ENST00000513259 ILDR2Q71H61 639 aa14.73□□□□□ -0.05
SNHG4-207ENST00000513259 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
SNHG4-207ENST00000513259 UHRF1BP1Q6BDS2 1440 aa14.73□□□□□ -0.05
SNHG4-207ENST00000513259 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
SNHG4-207ENST00000513259 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
SNHG4-207ENST00000513259 DISP3Q9P2K9 1392 aa14.72□□□□□ -0.05
SNHG4-207ENST00000513259 C3P01024 1663 aa14.71□□□□□ -0.05
SNHG4-207ENST00000513259 CDC42BPBQ9Y5S2 1711 aa14.71□□□□□ -0.05
SNHG4-207ENST00000513259 ABCA6Q8N139 1617 aa14.7□□□□□ -0.06
SNHG4-207ENST00000513259 CLIP1P30622 1438 aa14.69□□□□□ -0.06
SNHG4-207ENST00000513259 REREQ9P2R6 1566 aa14.68□□□□□ -0.06
SNHG4-207ENST00000513259 MLH3Q9UHC1 1453 aa14.68□□□□□ -0.06
SNHG4-207ENST00000513259 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
SNHG4-207ENST00000513259 PTPRTO14522 1441 aa14.66□□□□□ -0.06
SNHG4-207ENST00000513259 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
SNHG4-207ENST00000513259 SOCS7O14512 581 aa14.65□□□□□ -0.06
SNHG4-207ENST00000513259 AGLP35573 1532 aa14.65□□□□□ -0.06
SNHG4-207ENST00000513259 PREX2Q70Z35 1606 aa14.64□□□□□ -0.07
SNHG4-207ENST00000513259 ABCC1P33527 1531 aa14.64□□□□□ -0.07
SNHG4-207ENST00000513259 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
SNHG4-207ENST00000513259 KIDINS220Q9ULH0 1771 aa14.63□□□□□ -0.07
SNHG4-207ENST00000513259 LTBP4Q8N2S1 1624 aa14.63□□□□□ -0.07
SNHG4-207ENST00000513259 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
SNHG4-207ENST00000513259 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
SNHG4-207ENST00000513259 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
SNHG4-207ENST00000513259 SPATA31D1Q6ZQQ2 1576 aa14.59□□□□□ -0.07
SNHG4-207ENST00000513259 CASKIN1Q8WXD9 1431 aa14.58□□□□□ -0.07
SNHG4-207ENST00000513259 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.07
SNHG4-207ENST00000513259 CCDC18Q5T9S5 1454 aa14.57□□□□□ -0.08
SNHG4-207ENST00000513259 CAMSAP1Q5T5Y3 1602 aa14.57□□□□□ -0.08
SNHG4-207ENST00000513259 NCKAP5LQ9HCH0 1330 aa14.57□□□□□ -0.08
SNHG4-207ENST00000513259 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
SNHG4-207ENST00000513259 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
SNHG4-207ENST00000513259 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
SNHG4-207ENST00000513259 HNRNPMP52272 730 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNHG4-207ENST00000513259 IQSEC2Q5JU85 1478 aa14.56□□□□□ -0.08
SNHG4-207ENST00000513259 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
SNHG4-207ENST00000513259 NPATQ14207 1427 aa14.55□□□□□ -0.08
SNHG4-207ENST00000513259 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
SNHG4-207ENST00000513259 SPAG9O60271 1321 aaKnown RBP14.54□□□□□ -0.08
SNHG4-207ENST00000513259 CLTCQ00610 1675 aaKnown RBP14.53□□□□□ -0.08
SNHG4-207ENST00000513259 SYCP2Q9BX26 1530 aa14.53□□□□□ -0.08
SNHG4-207ENST00000513259 ZNF335Q9H4Z2 1342 aaPredicted RBP14.53□□□□□ -0.08
SNHG4-207ENST00000513259 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.08
SNHG4-207ENST00000513259 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
SNHG4-207ENST00000513259 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
SNHG4-207ENST00000513259 UBAP1LF5GYI3 381 aa14.5□□□□□ -0.09
SNHG4-207ENST00000513259 GGT6Q6P531 493 aa14.49□□□□□ -0.09
SNHG4-207ENST00000513259 ATP7AQ04656 1500 aa14.49□□□□□ -0.09
SNHG4-207ENST00000513259 FYCO1Q9BQS8 1478 aa14.49□□□□□ -0.09
SNHG4-207ENST00000513259 MYO3AQ8NEV4 1616 aa14.48□□□□□ -0.09
SNHG4-207ENST00000513259 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms