RNA–Protein interactions for RNA: ENST00000512744.5

PLXND1-214, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 2,662 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-214ENST00000512744 WDR62O43379 1518 aa23.04■■□□□ 1.28
PLXND1-214ENST00000512744 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
PLXND1-214ENST00000512744 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
PLXND1-214ENST00000512744 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
PLXND1-214ENST00000512744 ANKRD30BQ9BXX2 1392 aa23.02■■□□□ 1.28
PLXND1-214ENST00000512744 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
PLXND1-214ENST00000512744 ABCC5O15440 1437 aa23.02■■□□□ 1.28
PLXND1-214ENST00000512744 MSH5O43196 834 aa23.01■■□□□ 1.27
PLXND1-214ENST00000512744 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
PLXND1-214ENST00000512744 DAPK1P53355 1430 aa23.01■■□□□ 1.27
PLXND1-214ENST00000512744 ZNF326Q5BKZ1 582 aaKnown RBP23.01■■□□□ 1.27
PLXND1-214ENST00000512744 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
PLXND1-214ENST00000512744 ZNF777Q9ULD5 760 aaPredicted RBP23■■□□□ 1.27
PLXND1-214ENST00000512744 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
PLXND1-214ENST00000512744 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
PLXND1-214ENST00000512744 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
PLXND1-214ENST00000512744 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
PLXND1-214ENST00000512744 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
PLXND1-214ENST00000512744 PRG4Q92954 1404 aaPredicted RBP22.94■■□□□ 1.26
PLXND1-214ENST00000512744 NUP153P49790 1475 aaKnown RBP22.94■■□□□ 1.26
PLXND1-214ENST00000512744 TEX14Q8IWB6 1497 aa22.93■■□□□ 1.26
PLXND1-214ENST00000512744 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
PLXND1-214ENST00000512744 RPRD2Q5VT52 1461 aaKnown RBP22.93■■□□□ 1.26
PLXND1-214ENST00000512744 B4GALNT3Q6L9W6 998 aa22.91■■□□□ 1.26
PLXND1-214ENST00000512744 FBLN2P98095 1184 aa22.88■■□□□ 1.25
PLXND1-214ENST00000512744 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
PLXND1-214ENST00000512744 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
PLXND1-214ENST00000512744 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
PLXND1-214ENST00000512744 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
PLXND1-214ENST00000512744 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
PLXND1-214ENST00000512744 PZPP20742 1482 aa22.84■■□□□ 1.25
PLXND1-214ENST00000512744 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
PLXND1-214ENST00000512744 KIAA0556O60303 1618 aa22.84■■□□□ 1.25
PLXND1-214ENST00000512744 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
PLXND1-214ENST00000512744 PKD2Q13563 968 aa22.83■■□□□ 1.25
PLXND1-214ENST00000512744 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
PLXND1-214ENST00000512744 CAMSAP2Q08AD1 1489 aa22.78■■□□□ 1.24
PLXND1-214ENST00000512744 PPP4R2Q9NY27 417 aa22.78■■□□□ 1.24
PLXND1-214ENST00000512744 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
PLXND1-214ENST00000512744 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
PLXND1-214ENST00000512744 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
PLXND1-214ENST00000512744 KIF14Q15058 1648 aa22.76■■□□□ 1.23
PLXND1-214ENST00000512744 DHX29Q7Z478 1369 aaKnown RBP22.75■■□□□ 1.23
PLXND1-214ENST00000512744 USP47Q96K76 1375 aa22.75■■□□□ 1.23
PLXND1-214ENST00000512744 GPATCH8Q9UKJ3 1502 aaKnown RBP22.75■■□□□ 1.23
PLXND1-214ENST00000512744 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
PLXND1-214ENST00000512744 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
PLXND1-214ENST00000512744 BCORL1Q5H9F3 1711 aa22.73■■□□□ 1.23
PLXND1-214ENST00000512744 TROQ12816 1431 aaPredicted RBP22.72■■□□□ 1.23
PLXND1-214ENST00000512744 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
PLXND1-214ENST00000512744 KIAA1107Q9UPP5 1409 aa22.69■■□□□ 1.22
PLXND1-214ENST00000512744 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
PLXND1-214ENST00000512744 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
PLXND1-214ENST00000512744 NUP155O75694 1391 aa22.66■■□□□ 1.22
PLXND1-214ENST00000512744 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
PLXND1-214ENST00000512744 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
PLXND1-214ENST00000512744 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
PLXND1-214ENST00000512744 CARD11Q9BXL7 1154 aa22.64■■□□□ 1.21
PLXND1-214ENST00000512744 CEP170Q5SW79 1584 aa22.64■■□□□ 1.21
PLXND1-214ENST00000512744 ANKRD50Q9ULJ7 1429 aa22.64■■□□□ 1.21
PLXND1-214ENST00000512744 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
PLXND1-214ENST00000512744 SALL2Q9Y467 1007 aaPredicted RBP22.62■■□□□ 1.21
PLXND1-214ENST00000512744 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
PLXND1-214ENST00000512744 ANKRD30AQ9BXX3 1397 aa22.61■■□□□ 1.21
PLXND1-214ENST00000512744 ERICH6BQ5W0A0 696 aa22.59■■□□□ 1.21
PLXND1-214ENST00000512744 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
PLXND1-214ENST00000512744 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
PLXND1-214ENST00000512744 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
PLXND1-214ENST00000512744 NUDCQ9Y266 331 aa22.56■■□□□ 1.2
PLXND1-214ENST00000512744 KDM5CP41229 1560 aa22.56■■□□□ 1.2
PLXND1-214ENST00000512744 POLR1AO95602 1720 aaPredicted RBP22.55■■□□□ 1.2
PLXND1-214ENST00000512744 ADGRL2O95490 1459 aa22.55■■□□□ 1.2
PLXND1-214ENST00000512744 BCL11AQ9H165 835 aa22.54■■□□□ 1.2
PLXND1-214ENST00000512744 SMG6Q86US8 1419 aaKnown RBP22.54■■□□□ 1.2
PLXND1-214ENST00000512744 RGL3Q3MIN7 710 aa22.54■■□□□ 1.2
PLXND1-214ENST00000512744 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
PLXND1-214ENST00000512744 C9orf84Q5VXU9 1444 aa22.53■■□□□ 1.2
PLXND1-214ENST00000512744 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
PLXND1-214ENST00000512744 ATP10BO94823 1461 aa22.51■■□□□ 1.19
PLXND1-214ENST00000512744 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
PLXND1-214ENST00000512744 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
PLXND1-214ENST00000512744 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
PLXND1-214ENST00000512744 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
PLXND1-214ENST00000512744 CROCC2H7BZ55 1655 aa22.49■■□□□ 1.19
PLXND1-214ENST00000512744 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
PLXND1-214ENST00000512744 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
PLXND1-214ENST00000512744 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
PLXND1-214ENST00000512744 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
PLXND1-214ENST00000512744 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
PLXND1-214ENST00000512744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.191e-6■■■□□ 15.7
PLXND1-214ENST00000512744 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
PLXND1-214ENST00000512744 CDC42BPAQ5VT25 1732 aa22.46■■□□□ 1.19
PLXND1-214ENST00000512744 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
PLXND1-214ENST00000512744 CARMIL2Q6F5E8 1435 aa22.46■■□□□ 1.19
PLXND1-214ENST00000512744 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.19
PLXND1-214ENST00000512744 UHRF1BP1Q6BDS2 1440 aa22.44■■□□□ 1.18
PLXND1-214ENST00000512744 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
PLXND1-214ENST00000512744 RNF123Q5XPI4 1314 aa22.44■■□□□ 1.18
PLXND1-214ENST00000512744 ROCK2O75116 1388 aaKnown RBP22.43■■□□□ 1.18
PLXND1-214ENST00000512744 NUP160Q12769 1436 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms