RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 FANCAO15360 1455 aa22.01■■□□□ 1.11
CLDND1-224ENST00000511667 CLIP1P30622 1438 aa22■■□□□ 1.11
CLDND1-224ENST00000511667 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
CLDND1-224ENST00000511667 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
CLDND1-224ENST00000511667 PLCH2O75038 1416 aa21.97■■□□□ 1.11
CLDND1-224ENST00000511667 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
CLDND1-224ENST00000511667 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
CLDND1-224ENST00000511667 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
CLDND1-224ENST00000511667 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.1
CLDND1-224ENST00000511667 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
CLDND1-224ENST00000511667 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.1
CLDND1-224ENST00000511667 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
CLDND1-224ENST00000511667 KIF14Q15058 1648 aa21.93■■□□□ 1.1
CLDND1-224ENST00000511667 RICTORQ6R327 1708 aa21.92■■□□□ 1.1
CLDND1-224ENST00000511667 FER1L4A9Z1Z3 1794 aa21.91■■□□□ 1.1
CLDND1-224ENST00000511667 PREX1Q8TCU6 1659 aa21.9■■□□□ 1.1
CLDND1-224ENST00000511667 ZMYM4Q5VZL5 1548 aa21.88■■□□□ 1.09
CLDND1-224ENST00000511667 MYO5CQ9NQX4 1742 aa21.87■■□□□ 1.09
CLDND1-224ENST00000511667 MLECQ14165 292 aa21.87■■□□□ 1.09
CLDND1-224ENST00000511667 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CLDND1-224ENST00000511667 ZFYVE16Q7Z3T8 1539 aa21.86■■□□□ 1.09
CLDND1-224ENST00000511667 STRCQ7RTU9 1775 aa21.85■■□□□ 1.09
CLDND1-224ENST00000511667 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
CLDND1-224ENST00000511667 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
CLDND1-224ENST00000511667 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.08
CLDND1-224ENST00000511667 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
CLDND1-224ENST00000511667 IQSEC2Q5JU85 1478 aa21.8■■□□□ 1.08
CLDND1-224ENST00000511667 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
CLDND1-224ENST00000511667 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
CLDND1-224ENST00000511667 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
CLDND1-224ENST00000511667 PTPRTO14522 1441 aa21.79■■□□□ 1.08
CLDND1-224ENST00000511667 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
CLDND1-224ENST00000511667 PREX2Q70Z35 1606 aa21.78■■□□□ 1.08
CLDND1-224ENST00000511667 SETD1BQ9UPS6 1966 aaKnown RBP21.75■■□□□ 1.07
CLDND1-224ENST00000511667 KDM5CP41229 1560 aa21.74■■□□□ 1.07
CLDND1-224ENST00000511667 CEBPAP49715 358 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-224ENST00000511667 CDC42BPAQ5VT25 1732 aa21.74■■□□□ 1.07
CLDND1-224ENST00000511667 ARHGAP5Q13017 1502 aa21.74■■□□□ 1.07
CLDND1-224ENST00000511667 LTBP4Q8N2S1 1624 aa21.73■■□□□ 1.07
CLDND1-224ENST00000511667 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
CLDND1-224ENST00000511667 ABCC1P33527 1531 aa21.7■■□□□ 1.07
CLDND1-224ENST00000511667 GPATCH8Q9UKJ3 1502 aaKnown RBP21.7■■□□□ 1.07
CLDND1-224ENST00000511667 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
CLDND1-224ENST00000511667 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
CLDND1-224ENST00000511667 ATP10AO60312 1499 aa21.69■■□□□ 1.06
CLDND1-224ENST00000511667 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
CLDND1-224ENST00000511667 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
CLDND1-224ENST00000511667 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
CLDND1-224ENST00000511667 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
CLDND1-224ENST00000511667 SAMD9LQ8IVG5 1584 aa21.63■■□□□ 1.05
CLDND1-224ENST00000511667 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
CLDND1-224ENST00000511667 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
CLDND1-224ENST00000511667 REREQ9P2R6 1566 aa21.62■■□□□ 1.05
CLDND1-224ENST00000511667 KIAA1107Q9UPP5 1409 aa21.61■■□□□ 1.05
CLDND1-224ENST00000511667 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
CLDND1-224ENST00000511667 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
CLDND1-224ENST00000511667 DIP2CQ9Y2E4 1556 aa21.59■■□□□ 1.05
CLDND1-224ENST00000511667 TIAM1Q13009 1591 aa21.58■■□□□ 1.05
CLDND1-224ENST00000511667 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
CLDND1-224ENST00000511667 MAP3K1Q13233 1512 aa21.57■■□□□ 1.04
CLDND1-224ENST00000511667 ABCA6Q8N139 1617 aa21.56■■□□□ 1.04
CLDND1-224ENST00000511667 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
CLDND1-224ENST00000511667 KIDINS220Q9ULH0 1771 aa21.56■■□□□ 1.04
CLDND1-224ENST00000511667 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
CLDND1-224ENST00000511667 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
CLDND1-224ENST00000511667 C3P01024 1663 aa21.53■■□□□ 1.04
CLDND1-224ENST00000511667 AGLP35573 1532 aa21.53■■□□□ 1.04
CLDND1-224ENST00000511667 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-224ENST00000511667 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
CLDND1-224ENST00000511667 NCOA2Q15596 1464 aa21.51■■□□□ 1.03
CLDND1-224ENST00000511667 MBD5Q9P267 1494 aa21.51■■□□□ 1.03
CLDND1-224ENST00000511667 MED1Q15648 1581 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-224ENST00000511667 LRRC9Q6ZRR7 1453 aa21.5■■□□□ 1.03
CLDND1-224ENST00000511667 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
CLDND1-224ENST00000511667 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-224ENST00000511667 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-224ENST00000511667 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
CLDND1-224ENST00000511667 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
CLDND1-224ENST00000511667 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-224ENST00000511667 ZNF644Q9H582 1327 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-224ENST00000511667 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
CLDND1-224ENST00000511667 ATP7AQ04656 1500 aa21.43■■□□□ 1.02
CLDND1-224ENST00000511667 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
CLDND1-224ENST00000511667 CNTLNQ9NXG0 1405 aa21.41■■□□□ 1.02
CLDND1-224ENST00000511667 SPAG9O60271 1321 aaKnown RBP21.41■■□□□ 1.02
CLDND1-224ENST00000511667 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-224ENST00000511667 RTEL1-TNFRSF6BF6WH68 1400 aa21.4■■□□□ 1.02
CLDND1-224ENST00000511667 HSPA1LP34931 641 aa21.4■■□□□ 1.02
CLDND1-224ENST00000511667 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-224ENST00000511667 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
CLDND1-224ENST00000511667 NCKAP5LQ9HCH0 1330 aa21.38■■□□□ 1.01
CLDND1-224ENST00000511667 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
CLDND1-224ENST00000511667 NPATQ14207 1427 aa21.38■■□□□ 1.01
CLDND1-224ENST00000511667 PKD2Q13563 968 aa21.36■■□□□ 1.01
CLDND1-224ENST00000511667 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
CLDND1-224ENST00000511667 A2MP01023 1474 aa21.34■■□□□ 1.01
CLDND1-224ENST00000511667 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
CLDND1-224ENST00000511667 PLA2R1Q13018 1463 aa21.33■■□□□ 1.01
CLDND1-224ENST00000511667 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
CLDND1-224ENST00000511667 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms