RNA–Protein interactions for RNA: ENST00000511572.5

APBB2-222, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 4

Gene APBB2, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-222	ENST00000511572	CDC42BPB	Q9Y5S2	1711 aa		29.11	■■■□□ 2.25
APBB2-222	ENST00000511572	ZMYM4	Q5VZL5	1548 aa		29.11	■■■□□ 2.25
APBB2-222	ENST00000511572	VPS8	Q8N3P4	1428 aa		29.1	■■■□□ 2.25
APBB2-222	ENST00000511572	POGZ	Q7Z3K3	1410 aa		29.09	■■■□□ 2.25
APBB2-222	ENST00000511572	SCAPER	Q9BY12	1400 aa		29.09	■■■□□ 2.25
APBB2-222	ENST00000511572	CDC42BPA	Q5VT25	1732 aa		29.07	■■■□□ 2.24
APBB2-222	ENST00000511572	ARHGEF40	Q8TER5	1519 aa		29.07	■■■□□ 2.24
APBB2-222	ENST00000511572	EHBP1L1	Q8N3D4	1523 aa		29.05	■■■□□ 2.24
APBB2-222	ENST00000511572	MTUS2	Q5JR59	1369 aa		29.05	■■■□□ 2.24
APBB2-222	ENST00000511572	MAGI2	Q86UL8	1455 aa		29.02	■■■□□ 2.24
APBB2-222	ENST00000511572	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29	■■■□□ 2.23
APBB2-222	ENST00000511572	ABCC1	P33527	1531 aa		28.99	■■■□□ 2.23
APBB2-222	ENST00000511572	TIAM1	Q13009	1591 aa		28.99	■■■□□ 2.23
APBB2-222	ENST00000511572	ZNF518A	Q6AHZ1	1483 aa		28.98	■■■□□ 2.23
APBB2-222	ENST00000511572	ZFYVE16	Q7Z3T8	1539 aa		28.98	■■■□□ 2.23
APBB2-222	ENST00000511572	KDM5C	P41229	1560 aa		28.96	■■■□□ 2.23
APBB2-222	ENST00000511572	YEATS2	Q9ULM3	1422 aa		28.94	■■■□□ 2.22
APBB2-222	ENST00000511572	ITSN2	Q9NZM3	1697 aa		28.93	■■■□□ 2.22
APBB2-222	ENST00000511572	CCNB3	Q8WWL7	1395 aa		28.92	■■■□□ 2.22
APBB2-222	ENST00000511572	ARHGEF12	Q9NZN5	1544 aa		28.92	■■■□□ 2.22
APBB2-222	ENST00000511572	SAMD9L	Q8IVG5	1584 aa		28.92	■■■□□ 2.22
APBB2-222	ENST00000511572	MAP3K1	Q13233	1512 aa		28.91	■■■□□ 2.22
APBB2-222	ENST00000511572	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.87	■■■□□ 2.21
APBB2-222	ENST00000511572	AFAP1	Q8N556	730 aa		28.87	■■■□□ 2.21
APBB2-222	ENST00000511572	HECW2	Q9P2P5	1572 aa		28.87	■■■□□ 2.21
APBB2-222	ENST00000511572	TRAPPC8	Q9Y2L5	1435 aa		28.86	■■■□□ 2.21
APBB2-222	ENST00000511572	BCORL1	Q5H9F3	1711 aa		28.86	■■■□□ 2.21
APBB2-222	ENST00000511572	ADAMTSL3	P82987	1691 aa		28.86	■■■□□ 2.21
APBB2-222	ENST00000511572	LRRC9	Q6ZRR7	1453 aa		28.85	■■■□□ 2.21
APBB2-222	ENST00000511572	NCOA2	Q15596	1464 aa		28.85	■■■□□ 2.21
APBB2-222	ENST00000511572	SIGLEC1	Q9BZZ2	1709 aa		28.84	■■■□□ 2.21
APBB2-222	ENST00000511572	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.84	■■■□□ 2.21
APBB2-222	ENST00000511572	MLH3	Q9UHC1	1453 aa		28.84	■■■□□ 2.21
APBB2-222	ENST00000511572	SYCP2	Q9BX26	1530 aa		28.84	■■■□□ 2.21
APBB2-222	ENST00000511572	KIAA1107	Q9UPP5	1409 aa		28.83	■■■□□ 2.21
APBB2-222	ENST00000511572	PLEKHH2	Q8IVE3	1493 aa		28.83	■■■□□ 2.21
APBB2-222	ENST00000511572	ATP10A	O60312	1499 aa		28.82	■■■□□ 2.2
APBB2-222	ENST00000511572	C9orf84	Q5VXU9	1444 aa		28.81	■■■□□ 2.2
APBB2-222	ENST00000511572	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.8	■■■□□ 2.2
APBB2-222	ENST00000511572	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.79	■■■□□ 2.2
APBB2-222	ENST00000511572	DIP2C	Q9Y2E4	1556 aa		28.79	■■■□□ 2.2
APBB2-222	ENST00000511572	ABCA6	Q8N139	1617 aa		28.77	■■■□□ 2.2
APBB2-222	ENST00000511572	RERE	Q9P2R6	1566 aa		28.76	■■■□□ 2.19
APBB2-222	ENST00000511572	MADD	Q8WXG6	1647 aa		28.75	■■■□□ 2.19
APBB2-222	ENST00000511572	KIDINS220	Q9ULH0	1771 aa		28.74	■■■□□ 2.19
APBB2-222	ENST00000511572	KANK4	Q5T7N3	995 aa	Predicted RBP	28.72	■■■□□ 2.19
APBB2-222	ENST00000511572	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.71	■■■□□ 2.19
APBB2-222	ENST00000511572	PTPRM	P28827	1452 aa		28.7	■■■□□ 2.18
APBB2-222	ENST00000511572	MBD5	Q9P267	1494 aa		28.7	■■■□□ 2.18
APBB2-222	ENST00000511572	ZNF644	Q9H582	1327 aa	Predicted RBP	28.69	■■■□□ 2.18
APBB2-222	ENST00000511572	INO80	Q9ULG1	1556 aa	Predicted RBP	28.68	■■■□□ 2.18
APBB2-222	ENST00000511572	MYT1L	Q9UL68	1186 aa		28.68	■■■□□ 2.18
APBB2-222	ENST00000511572	CAMSAP2	Q08AD1	1489 aa		28.66	■■■□□ 2.18
APBB2-222	ENST00000511572	ATP7A	Q04656	1500 aa		28.65	■■■□□ 2.18
APBB2-222	ENST00000511572	SPAG9	O60271	1321 aa	Known RBP	28.65	■■■□□ 2.18
APBB2-222	ENST00000511572	AGL	P35573	1532 aa		28.64	■■■□□ 2.18
APBB2-222	ENST00000511572	RIMS1	Q86UR5	1692 aa	Known RBP	28.64	■■■□□ 2.17
APBB2-222	ENST00000511572	APLP2	Q06481	763 aa		28.62	■■■□□ 2.17
APBB2-222	ENST00000511572	FER1L4	A9Z1Z3	1794 aa		28.6	■■■□□ 2.17
APBB2-222	ENST00000511572	MYOM3	Q5VTT5	1437 aa		28.6	■■■□□ 2.17
APBB2-222	ENST00000511572	CCDC141	Q6ZP82	1450 aa		28.59	■■■□□ 2.17
APBB2-222	ENST00000511572	MLEC	Q14165	292 aa		28.58	■■■□□ 2.17
APBB2-222	ENST00000511572	MIA2	Q96PC5	1412 aa		28.58	■■■□□ 2.17
APBB2-222	ENST00000511572	ARHGEF5	Q12774	1597 aa		28.57	■■■□□ 2.16
APBB2-222	ENST00000511572	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.56	■■■□□ 2.16
APBB2-222	ENST00000511572	PLXNC1	O60486	1568 aa		28.56	■■■□□ 2.16
APBB2-222	ENST00000511572	RSPH4A	Q5TD94	716 aa		28.53	■■■□□ 2.16
APBB2-222	ENST00000511572	A2M	P01023	1474 aa		28.51	■■■□□ 2.15
APBB2-222	ENST00000511572	ADGB	Q8N7X0	1667 aa		28.51	■■■□□ 2.15
APBB2-222	ENST00000511572	MAST1	Q9Y2H9	1570 aa		28.43	■■■□□ 2.14
APBB2-222	ENST00000511572	PTPN23	Q9H3S7	1636 aa		28.42	■■■□□ 2.14
APBB2-222	ENST00000511572	FGD6	Q6ZV73	1430 aa		28.4	■■■□□ 2.14
APBB2-222	ENST00000511572	DHX29	Q7Z478	1369 aa	Known RBP	28.39	■■■□□ 2.14
APBB2-222	ENST00000511572	TCOF1	Q13428	1488 aa	Known RBP	28.39	■■■□□ 2.13
APBB2-222	ENST00000511572	CNTLN	Q9NXG0	1405 aa		28.38	■■■□□ 2.13
APBB2-222	ENST00000511572	TSPY4	P0CV99	314 aa		28.38	■■■□□ 2.13
APBB2-222	ENST00000511572	TSPY10	P0CW01	314 aa		28.38	■■■□□ 2.13
APBB2-222	ENST00000511572	LMTK3	Q96Q04	1460 aa		28.37	■■■□□ 2.13
APBB2-222	ENST00000511572	C3	P01024	1663 aa		28.34	■■■□□ 2.13
APBB2-222	ENST00000511572	MROH2A	A6NES4	1674 aa		28.33	■■■□□ 2.13
APBB2-222	ENST00000511572	SHANK2	Q9UPX8	1470 aa		28.33	■■■□□ 2.13
APBB2-222	ENST00000511572	CROCC2	H7BZ55	1655 aa		28.32	■■■□□ 2.12
APBB2-222	ENST00000511572	PLPPR3	Q6T4P5	718 aa		28.32	■■■□□ 2.12
APBB2-222	ENST00000511572	ESF1	Q9H501	851 aa	Known RBP	28.31	■■■□□ 2.12
APBB2-222	ENST00000511572	ABCC5	O15440	1437 aa		28.3	■■■□□ 2.12
APBB2-222	ENST00000511572	CEBPA	P49715	358 aa	Predicted RBP	28.3	■■■□□ 2.12
APBB2-222	ENST00000511572	DNMT1	P26358	1616 aa	Known RBP	28.29	■■■□□ 2.12
APBB2-222	ENST00000511572	PPP6R1	Q9UPN7	881 aa		28.27	■■■□□ 2.12
APBB2-222	ENST00000511572	DAPK1	P53355	1430 aa		28.26	■■■□□ 2.12
APBB2-222	ENST00000511572	PREX1	Q8TCU6	1659 aa		28.26	■■■□□ 2.12
APBB2-222	ENST00000511572	CLTC	Q00610	1675 aa	Known RBP	28.26	■■■□□ 2.11
APBB2-222	ENST00000511572	GGT6	Q6P531	493 aa		28.25	■■■□□ 2.11
APBB2-222	ENST00000511572	FAM135A	Q9P2D6	1515 aa		28.24	■■■□□ 2.11
APBB2-222	ENST00000511572	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.22	■■■□□ 2.11
APBB2-222	ENST00000511572	SETD1B	Q9UPS6	1966 aa	Known RBP	28.22	■■■□□ 2.11
APBB2-222	ENST00000511572	ZMYM3	Q14202	1370 aa		28.22	■■■□□ 2.11
APBB2-222	ENST00000511572	KIF3B	O15066	747 aa		28.21	■■■□□ 2.11
APBB2-222	ENST00000511572	DUOX2	Q9NRD8	1548 aa		28.2	■■■□□ 2.1
APBB2-222	ENST00000511572	RNF17	Q9BXT8	1623 aa	Known RBP	28.2	■■■□□ 2.1
APBB2-222	ENST00000511572	NPAT	Q14207	1427 aa		28.18	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms