RNA–Protein interactions for RNA: ENST00000510757.1

TRIO-216, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-216ENST00000510757 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
TRIO-216ENST00000510757 KANK4Q5T7N3 995 aaPredicted RBP10.46□□□□□ -0.73
TRIO-216ENST00000510757 SIGLEC1Q9BZZ2 1709 aa10.45□□□□□ -0.74
TRIO-216ENST00000510757 CFAP74Q9C0B2 1584 aa10.45□□□□□ -0.74
TRIO-216ENST00000510757 EHBP1L1Q8N3D4 1523 aa10.45□□□□□ -0.74
TRIO-216ENST00000510757 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
TRIO-216ENST00000510757 SAMD9LQ8IVG5 1584 aa10.44□□□□□ -0.74
TRIO-216ENST00000510757 ZMYM4Q5VZL5 1548 aa10.44□□□□□ -0.74
TRIO-216ENST00000510757 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
TRIO-216ENST00000510757 ABCC1P33527 1531 aa10.43□□□□□ -0.74
TRIO-216ENST00000510757 DENND4BO75064 1496 aaPredicted RBP10.43□□□□□ -0.74
TRIO-216ENST00000510757 ADGRL1O94910 1474 aa10.43□□□□□ -0.74
TRIO-216ENST00000510757 POGZQ7Z3K3 1410 aa10.43□□□□□ -0.74
TRIO-216ENST00000510757 SCAPERQ9BY12 1400 aa10.43□□□□□ -0.74
TRIO-216ENST00000510757 KDM5CP41229 1560 aa10.43□□□□□ -0.74
TRIO-216ENST00000510757 EFCAB2Q5VUJ9 269 aa10.42□□□□□ -0.74
TRIO-216ENST00000510757 ARHGAP5Q13017 1502 aa10.42□□□□□ -0.74
TRIO-216ENST00000510757 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
TRIO-216ENST00000510757 TRAPPC8Q9Y2L5 1435 aa10.41□□□□□ -0.74
TRIO-216ENST00000510757 MTUS2Q5JR59 1369 aa10.41□□□□□ -0.74
TRIO-216ENST00000510757 ITSN2Q9NZM3 1697 aa10.41□□□□□ -0.74
TRIO-216ENST00000510757 YEATS2Q9ULM3 1422 aa10.41□□□□□ -0.74
TRIO-216ENST00000510757 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
TRIO-216ENST00000510757 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
TRIO-216ENST00000510757 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
TRIO-216ENST00000510757 ARHGEF40Q8TER5 1519 aa10.39□□□□□ -0.75
TRIO-216ENST00000510757 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
TRIO-216ENST00000510757 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
TRIO-216ENST00000510757 MAGI2Q86UL8 1455 aa10.37□□□□□ -0.75
TRIO-216ENST00000510757 MLH3Q9UHC1 1453 aa10.37□□□□□ -0.75
TRIO-216ENST00000510757 KIDINS220Q9ULH0 1771 aa10.37□□□□□ -0.75
TRIO-216ENST00000510757 SYCP2Q9BX26 1530 aa10.37□□□□□ -0.75
TRIO-216ENST00000510757 CCNB3Q8WWL7 1395 aa10.37□□□□□ -0.75
TRIO-216ENST00000510757 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
TRIO-216ENST00000510757 ADAMTSL3P82987 1691 aa10.35□□□□□ -0.75
TRIO-216ENST00000510757 ZFYVE16Q7Z3T8 1539 aa10.35□□□□□ -0.75
TRIO-216ENST00000510757 HNRNPMP52272 730 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRIO-216ENST00000510757 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
TRIO-216ENST00000510757 ABCA6Q8N139 1617 aa10.35□□□□□ -0.75
TRIO-216ENST00000510757 DIP2CQ9Y2E4 1556 aa10.35□□□□□ -0.75
TRIO-216ENST00000510757 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
TRIO-216ENST00000510757 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
TRIO-216ENST00000510757 ATP10AO60312 1499 aa10.33□□□□□ -0.76
TRIO-216ENST00000510757 REREQ9P2R6 1566 aa10.33□□□□□ -0.76
TRIO-216ENST00000510757 INO80Q9ULG1 1556 aaPredicted RBP10.33□□□□□ -0.76
TRIO-216ENST00000510757 CAMSAP2Q08AD1 1489 aa10.32□□□□□ -0.76
TRIO-216ENST00000510757 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
TRIO-216ENST00000510757 PLEKHH2Q8IVE3 1493 aa10.31□□□□□ -0.76
TRIO-216ENST00000510757 ZNF777Q9ULD5 760 aaPredicted RBP10.31□□□□□ -0.76
TRIO-216ENST00000510757 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
TRIO-216ENST00000510757 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
TRIO-216ENST00000510757 PLXNC1O60486 1568 aa10.3□□□□□ -0.76
TRIO-216ENST00000510757 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
TRIO-216ENST00000510757 C9orf84Q5VXU9 1444 aa10.29□□□□□ -0.76
TRIO-216ENST00000510757 AGLP35573 1532 aa10.28□□□□□ -0.76
TRIO-216ENST00000510757 ATP7AQ04656 1500 aa10.28□□□□□ -0.76
TRIO-216ENST00000510757 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.77
TRIO-216ENST00000510757 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
TRIO-216ENST00000510757 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
TRIO-216ENST00000510757 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
TRIO-216ENST00000510757 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
TRIO-216ENST00000510757 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
TRIO-216ENST00000510757 CCDC141Q6ZP82 1450 aa10.26□□□□□ -0.77
TRIO-216ENST00000510757 SPAG9O60271 1321 aaKnown RBP10.26□□□□□ -0.77
TRIO-216ENST00000510757 ABCC5O15440 1437 aa10.25□□□□□ -0.77
TRIO-216ENST00000510757 PTPRMP28827 1452 aa10.24□□□□□ -0.77
TRIO-216ENST00000510757 A2MP01023 1474 aa10.23□□□□□ -0.77
TRIO-216ENST00000510757 CROCC2H7BZ55 1655 aa10.23□□□□□ -0.77
TRIO-216ENST00000510757 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
TRIO-216ENST00000510757 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
TRIO-216ENST00000510757 PTPRKQ15262 1439 aa10.22□□□□□ -0.77
TRIO-216ENST00000510757 RIMS1Q86UR5 1692 aaKnown RBP10.22□□□□□ -0.77
TRIO-216ENST00000510757 APLP2Q06481 763 aa10.21□□□□□ -0.77
TRIO-216ENST00000510757 DHX29Q7Z478 1369 aaKnown RBP10.21□□□□□ -0.78
TRIO-216ENST00000510757 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.78
TRIO-216ENST00000510757 DAPK1P53355 1430 aa10.2□□□□□ -0.78
TRIO-216ENST00000510757 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
TRIO-216ENST00000510757 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
TRIO-216ENST00000510757 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
TRIO-216ENST00000510757 MROH1Q8NDA8 1641 aa10.18□□□□□ -0.78
TRIO-216ENST00000510757 MLECQ14165 292 aa10.18□□□□□ -0.78
TRIO-216ENST00000510757 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
TRIO-216ENST00000510757 C3P01024 1663 aa10.17□□□□□ -0.78
TRIO-216ENST00000510757 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
TRIO-216ENST00000510757 RRBP1Q9P2E9 1410 aaKnown RBP10.16□□□□□ -0.78
TRIO-216ENST00000510757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIO-216ENST00000510757 RNF17Q9BXT8 1623 aaKnown RBP10.16□□□□□ -0.78
TRIO-216ENST00000510757 MROH2AA6NES4 1674 aa10.15□□□□□ -0.78
TRIO-216ENST00000510757 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
TRIO-216ENST00000510757 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
TRIO-216ENST00000510757 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
TRIO-216ENST00000510757 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.79
TRIO-216ENST00000510757 DUOX2Q9NRD8 1548 aa10.14□□□□□ -0.79
TRIO-216ENST00000510757 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
TRIO-216ENST00000510757 LMTK3Q96Q04 1460 aa10.14□□□□□ -0.79
TRIO-216ENST00000510757 CLTCQ00610 1675 aaKnown RBP10.14□□□□□ -0.79
TRIO-216ENST00000510757 DEPDC5O75140 1603 aa10.13□□□□□ -0.79
TRIO-216ENST00000510757 PPP6R1Q9UPN7 881 aa10.12□□□□□ -0.79
TRIO-216ENST00000510757 VWDEQ8N2E2 1590 aa10.12□□□□□ -0.79
TRIO-216ENST00000510757 ZMYM3Q14202 1370 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms