RNA–Protein interactions for RNA: ENST00000509418.1

SMARCAD1-206, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2 BASIC

Gene SMARCAD1, Length 2,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-206ENST00000509418 C3orf67Q6ZVT6 689 aa4.82□□□□□ -1.64
SMARCAD1-206ENST00000509418 MARVELD3Q96A59 401 aa4.82□□□□□ -1.64
SMARCAD1-206ENST00000509418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.82□□□□□ -1.641e-6■■■■□ 21.5
SMARCAD1-206ENST00000509418 SOX12O15370 315 aa4.81□□□□□ -1.64
SMARCAD1-206ENST00000509418 RIOK3O14730 519 aaKnown RBP4.81□□□□□ -1.64
SMARCAD1-206ENST00000509418 PDCD7Q8N8D1 485 aaKnown RBP4.8□□□□□ -1.64
SMARCAD1-206ENST00000509418 SPRYD3Q8NCJ5 442 aa4.79□□□□□ -1.64
SMARCAD1-206ENST00000509418 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
SMARCAD1-206ENST00000509418 UBTFP17480 764 aaKnown RBP4.78□□□□□ -1.64
SMARCAD1-206ENST00000509418 NPM2Q86SE8 214 aaKnown RBP4.78□□□□□ -1.64
SMARCAD1-206ENST00000509418 CABP2Q9NPB3 220 aa4.78□□□□□ -1.64
SMARCAD1-206ENST00000509418 BOLA1Q9Y3E2 137 aa4.77□□□□□ -1.65
SMARCAD1-206ENST00000509418 ECM2O94769 699 aaPredicted RBP4.75□□□□□ -1.65
SMARCAD1-206ENST00000509418 NLRP6P59044 892 aa4.75□□□□□ -1.65
SMARCAD1-206ENST00000509418 RIMBP2O15034 1052 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 RGL2O15211 777 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 HRCP23327 699 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 DOK7Q18PE1 504 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 DNAJC5Q9H3Z4 198 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 ZSWIM6Q9HCJ5 1215 aa4.73□□□□□ -1.65
SMARCAD1-206ENST00000509418 EFCAB3Q8N7B9 438 aa4.72□□□□□ -1.65
SMARCAD1-206ENST00000509418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.72□□□□□ -1.65
SMARCAD1-206ENST00000509418 EMP3P54852 163 aa4.72□□□□□ -1.65
SMARCAD1-206ENST00000509418 ZFP91Q96JP5 570 aaPredicted RBP4.72□□□□□ -1.65
SMARCAD1-206ENST00000509418 FAM205CA6NFA0 338 aa4.7□□□□□ -1.66
SMARCAD1-206ENST00000509418 CHGAP10645 457 aaKnown RBP4.68□□□□□ -1.66
SMARCAD1-206ENST00000509418 MICALL2Q8IY33 904 aa4.68□□□□□ -1.66
SMARCAD1-206ENST00000509418 RYDENQ9NUL5 291 aaKnown RBP4.68□□□□□ -1.66
SMARCAD1-206ENST00000509418 ZNF710Q8N1W2 664 aa4.68□□□□□ -1.66
SMARCAD1-206ENST00000509418 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
SMARCAD1-206ENST00000509418 HS3ST6Q96QI5 342 aa4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 STK24Q9Y6E0 443 aa4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 HOXB1P14653 301 aaPredicted RBP4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 DPY19L2Q6NUT2 758 aa4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 BCL11BQ9C0K0 894 aaPredicted RBP4.67□□□□□ -1.66
SMARCAD1-206ENST00000509418 POTEB3A0JP26 581 aa4.66□□□□□ -1.66
SMARCAD1-206ENST00000509418 BRPF1P55201 1214 aaPredicted RBP4.66□□□□□ -1.66
SMARCAD1-206ENST00000509418 POTEBQ6S5H4 581 aa4.66□□□□□ -1.66
SMARCAD1-206ENST00000509418 STK25O00506 426 aa4.66□□□□□ -1.66
SMARCAD1-206ENST00000509418 PHF8Q9UPP1 1060 aa4.65□□□□□ -1.66
SMARCAD1-206ENST00000509418 FBXO22Q8NEZ5 403 aa4.64□□□□□ -1.67
SMARCAD1-206ENST00000509418 HOXB3P14651 431 aaPredicted RBP4.63□□□□□ -1.67
SMARCAD1-206ENST00000509418 MS4A4AQ96JQ5 239 aa4.63□□□□□ -1.67
SMARCAD1-206ENST00000509418 PTGER2P43116 358 aa4.63□□□□□ -1.67
SMARCAD1-206ENST00000509418 HS6ST3Q8IZP7 471 aa4.62□□□□□ -1.67
SMARCAD1-206ENST00000509418 ARID3AQ99856 593 aa4.62□□□□□ -1.67
SMARCAD1-206ENST00000509418 SLC34A2O95436 690 aa4.61□□□□□ -1.67
SMARCAD1-206ENST00000509418 MFRPQ9BY79 579 aa4.61□□□□□ -1.67
SMARCAD1-206ENST00000509418 ERBB3P21860 1342 aa4.6□□□□□ -1.67
SMARCAD1-206ENST00000509418 PSDA5PKW4 1024 aaPredicted RBP4.6□□□□□ -1.67
SMARCAD1-206ENST00000509418 TMC2Q8TDI7 906 aa4.6□□□□□ -1.67
SMARCAD1-206ENST00000509418 NEUROD2Q15784 382 aa4.58□□□□□ -1.68
SMARCAD1-206ENST00000509418 RNF166Q96A37 237 aaPredicted RBP4.58□□□□□ -1.68
SMARCAD1-206ENST00000509418 KIF3CO14782 793 aa4.58□□□□□ -1.68
SMARCAD1-206ENST00000509418 ZNF687Q8N1G0 1237 aa4.58□□□□□ -1.68
SMARCAD1-206ENST00000509418 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
SMARCAD1-206ENST00000509418 PBX2P40425 430 aa4.57□□□□□ -1.68
SMARCAD1-206ENST00000509418 LMOD2Q6P5Q4 547 aa4.57□□□□□ -1.68
SMARCAD1-206ENST00000509418 GPR153Q6NV75 609 aa4.57□□□□□ -1.68
SMARCAD1-206ENST00000509418 TMEM92Q6UXU6 159 aa4.57□□□□□ -1.68
SMARCAD1-206ENST00000509418 TBC1D12O60347 775 aa4.56□□□□□ -1.68
SMARCAD1-206ENST00000509418 NKX1-1Q15270 411 aaPredicted RBP4.56□□□□□ -1.68
SMARCAD1-206ENST00000509418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMARCAD1-206ENST00000509418 ZNF316A6NFI3 1004 aaPredicted RBP4.55□□□□□ -1.68
SMARCAD1-206ENST00000509418 VARS2Q5ST30 1063 aaKnown RBP4.55□□□□□ -1.68
SMARCAD1-206ENST00000509418 C1orf115Q9H7X2 142 aa4.55□□□□□ -1.68
SMARCAD1-206ENST00000509418 MYT1LQ9UL68 1186 aa4.55□□□□□ -1.68
SMARCAD1-206ENST00000509418 C2orf72A6NCS6 295 aa4.54□□□□□ -1.68
SMARCAD1-206ENST00000509418 ZMYND15Q9H091 742 aa4.54□□□□□ -1.68
SMARCAD1-206ENST00000509418 GTPBP6O43824 516 aaPredicted RBP4.53□□□□□ -1.68
SMARCAD1-206ENST00000509418 FOXK1P85037 733 aa4.53□□□□□ -1.68
SMARCAD1-206ENST00000509418 PTCD2Q8WV60 388 aaKnown RBP4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 SLC24A3Q9HC58 644 aa4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 GPHNQ9NQX3 736 aaPredicted RBP4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 NECTIN2Q92692 538 aa4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 RSPH6AQ9H0K4 717 aa4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 PCDHGA4Q9Y5G9 962 aa4.52□□□□□ -1.69
SMARCAD1-206ENST00000509418 ARID3CA6NKF2 412 aa4.51□□□□□ -1.69
SMARCAD1-206ENST00000509418 ARSIQ5FYB1 569 aa4.51□□□□□ -1.69
SMARCAD1-206ENST00000509418 CCDC9Q9Y3X0 531 aaKnown RBP4.51□□□□□ -1.69
SMARCAD1-206ENST00000509418 PDE4AP27815 886 aa4.51□□□□□ -1.69
SMARCAD1-206ENST00000509418 ANKRD13DQ6ZTN6 518 aa4.5□□□□□ -1.69
SMARCAD1-206ENST00000509418 KCNH8Q96L42 1107 aa4.5□□□□□ -1.69
SMARCAD1-206ENST00000509418 ZBTB7CA1YPR0 619 aa4.49□□□□□ -1.69
SMARCAD1-206ENST00000509418 TK2O00142 265 aa4.49□□□□□ -1.69
SMARCAD1-206ENST00000509418 KCNV2Q8TDN2 545 aa4.49□□□□□ -1.69
SMARCAD1-206ENST00000509418 ZC3H15Q8WU90 426 aaKnown RBP4.49□□□□□ -1.69
SMARCAD1-206ENST00000509418 PLPP6Q8IY26 295 aa4.48□□□□□ -1.69
SMARCAD1-206ENST00000509418 PPP1R37O75864 691 aa4.47□□□□□ -1.69
SMARCAD1-206ENST00000509418 PPP4R3BQ5MIZ7 849 aa4.47□□□□□ -1.69
SMARCAD1-206ENST00000509418 IGSF3O75054 1194 aa4.47□□□□□ -1.69
SMARCAD1-206ENST00000509418 PDIA4P13667 645 aaKnown RBP4.47□□□□□ -1.69
SMARCAD1-206ENST00000509418 ARHGAP33O14559 1287 aa4.46□□□□□ -1.69
SMARCAD1-206ENST00000509418 LSM11P83369 360 aaKnown RBP eCLIP4.46□□□□□ -1.69
SMARCAD1-206ENST00000509418 CRISPLD2Q9H0B8 497 aa4.46□□□□□ -1.69
SMARCAD1-206ENST00000509418 LHX6Q9UPM6 363 aa4.46□□□□□ -1.7
SMARCAD1-206ENST00000509418 KDM4FA0A1W2PPD8 638 aa4.45□□□□□ -1.7
SMARCAD1-206ENST00000509418 APBB1O00213 710 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms