RNA–Protein interactions for RNA: ENST00000509207.1

KCNIP4-207, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-207ENST00000509207 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.71
KCNIP4-207ENST00000509207 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
KCNIP4-207ENST00000509207 MARVELD3Q96A59 401 aa10.56□□□□□ -0.72
KCNIP4-207ENST00000509207 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
KCNIP4-207ENST00000509207 KIF3CO14782 793 aa10.53□□□□□ -0.72
KCNIP4-207ENST00000509207 EMP3P54852 163 aa10.53□□□□□ -0.72
KCNIP4-207ENST00000509207 C2orf72A6NCS6 295 aa10.52□□□□□ -0.73
KCNIP4-207ENST00000509207 TMC2Q8TDI7 906 aa10.51□□□□□ -0.73
KCNIP4-207ENST00000509207 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
KCNIP4-207ENST00000509207 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
KCNIP4-207ENST00000509207 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
KCNIP4-207ENST00000509207 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
KCNIP4-207ENST00000509207 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
KCNIP4-207ENST00000509207 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
KCNIP4-207ENST00000509207 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
KCNIP4-207ENST00000509207 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
KCNIP4-207ENST00000509207 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
KCNIP4-207ENST00000509207 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
KCNIP4-207ENST00000509207 POTEB3A0JP26 581 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 SLC34A2O95436 690 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 FOXK1P85037 733 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 ARSIQ5FYB1 569 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 POTEBQ6S5H4 581 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 ERBB3P21860 1342 aa10.39□□□□□ -0.75
KCNIP4-207ENST00000509207 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
KCNIP4-207ENST00000509207 DSG2Q14126 1118 aa10.35□□□□□ -0.75
KCNIP4-207ENST00000509207 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
KCNIP4-207ENST00000509207 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
KCNIP4-207ENST00000509207 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.75
KCNIP4-207ENST00000509207 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
KCNIP4-207ENST00000509207 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
KCNIP4-207ENST00000509207 PDE4AP27815 886 aa10.32□□□□□ -0.76
KCNIP4-207ENST00000509207 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
KCNIP4-207ENST00000509207 NUDT7P0C024 238 aa10.31□□□□□ -0.76
KCNIP4-207ENST00000509207 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
KCNIP4-207ENST00000509207 ZNF316A6NFI3 1004 aaPredicted RBP10.3□□□□□ -0.76
KCNIP4-207ENST00000509207 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
KCNIP4-207ENST00000509207 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
KCNIP4-207ENST00000509207 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
KCNIP4-207ENST00000509207 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
KCNIP4-207ENST00000509207 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
KCNIP4-207ENST00000509207 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
KCNIP4-207ENST00000509207 TBC1D12O60347 775 aa10.25□□□□□ -0.77
KCNIP4-207ENST00000509207 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
KCNIP4-207ENST00000509207 MFSD10Q14728 455 aa10.24□□□□□ -0.77
KCNIP4-207ENST00000509207 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
KCNIP4-207ENST00000509207 DDX27Q96GQ7 796 aaKnown RBP10.24□□□□□ -0.77
KCNIP4-207ENST00000509207 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
KCNIP4-207ENST00000509207 KDM4FA0A1W2PPD8 638 aa10.23□□□□□ -0.77
KCNIP4-207ENST00000509207 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
KCNIP4-207ENST00000509207 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
KCNIP4-207ENST00000509207 UPF1Q92900 1129 aaKnown RBP eCLIP10.21□□□□□ -0.78
KCNIP4-207ENST00000509207 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
KCNIP4-207ENST00000509207 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
KCNIP4-207ENST00000509207 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
KCNIP4-207ENST00000509207 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
KCNIP4-207ENST00000509207 PBX2P40425 430 aa10.15□□□□□ -0.78
KCNIP4-207ENST00000509207 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
KCNIP4-207ENST00000509207 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
KCNIP4-207ENST00000509207 EMILIN3Q9NT22 766 aa10.11□□□□□ -0.79
KCNIP4-207ENST00000509207 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
KCNIP4-207ENST00000509207 MAP3K9P80192 1104 aa10.09□□□□□ -0.79
KCNIP4-207ENST00000509207 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
KCNIP4-207ENST00000509207 EVI5O60447 810 aa10.08□□□□□ -0.8
KCNIP4-207ENST00000509207 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
KCNIP4-207ENST00000509207 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
KCNIP4-207ENST00000509207 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
KCNIP4-207ENST00000509207 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
KCNIP4-207ENST00000509207 PTGER2P43116 358 aa10.06□□□□□ -0.8
KCNIP4-207ENST00000509207 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
KCNIP4-207ENST00000509207 FOSBP53539 338 aa10.05□□□□□ -0.8
KCNIP4-207ENST00000509207 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
KCNIP4-207ENST00000509207 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
KCNIP4-207ENST00000509207 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
KCNIP4-207ENST00000509207 DPYSL4O14531 572 aa10.01□□□□□ -0.81
KCNIP4-207ENST00000509207 PSEN2P49810 448 aa10.01□□□□□ -0.81
KCNIP4-207ENST00000509207 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
KCNIP4-207ENST00000509207 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
KCNIP4-207ENST00000509207 KCNK17Q96T54 332 aa10□□□□□ -0.81
KCNIP4-207ENST00000509207 WDR70Q9NW82 654 aa10□□□□□ -0.81
KCNIP4-207ENST00000509207 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
KCNIP4-207ENST00000509207 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
KCNIP4-207ENST00000509207 TK2O00142 265 aa9.98□□□□□ -0.81
KCNIP4-207ENST00000509207 E2F4Q16254 413 aa9.98□□□□□ -0.81
KCNIP4-207ENST00000509207 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
KCNIP4-207ENST00000509207 PTPREP23469 700 aa9.96□□□□□ -0.82
KCNIP4-207ENST00000509207 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
KCNIP4-207ENST00000509207 TSHZ2Q9NRE2 1034 aa9.95□□□□□ -0.82
KCNIP4-207ENST00000509207 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
KCNIP4-207ENST00000509207 PHF14O94880 888 aa9.94□□□□□ -0.82
KCNIP4-207ENST00000509207 PDIA6Q15084 440 aa9.93□□□□□ -0.82
KCNIP4-207ENST00000509207 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
KCNIP4-207ENST00000509207 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
KCNIP4-207ENST00000509207 HRO43593 1189 aa9.92□□□□□ -0.82
KCNIP4-207ENST00000509207 ARIH1Q9Y4X5 557 aaPredicted RBP9.92□□□□□ -0.82
KCNIP4-207ENST00000509207 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
KCNIP4-207ENST00000509207 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
KCNIP4-207ENST00000509207 EPAS1Q99814 870 aa9.9□□□□□ -0.82
KCNIP4-207ENST00000509207 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
KCNIP4-207ENST00000509207 DDX12PQ92771 950 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms