RNA–Protein interactions for RNA: ENST00000509207.1

KCNIP4-207, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-207ENST00000509207 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.34
KCNIP4-207ENST00000509207 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
KCNIP4-207ENST00000509207 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
KCNIP4-207ENST00000509207 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
KCNIP4-207ENST00000509207 FOXD1Q16676 465 aa18.53■□□□□ 0.56
KCNIP4-207ENST00000509207 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
KCNIP4-207ENST00000509207 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
KCNIP4-207ENST00000509207 ADRA2BP18089 450 aa17.5■□□□□ 0.39
KCNIP4-207ENST00000509207 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
KCNIP4-207ENST00000509207 MSH5O43196 834 aa17.26■□□□□ 0.35
KCNIP4-207ENST00000509207 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
KCNIP4-207ENST00000509207 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
KCNIP4-207ENST00000509207 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
KCNIP4-207ENST00000509207 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
KCNIP4-207ENST00000509207 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
KCNIP4-207ENST00000509207 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
KCNIP4-207ENST00000509207 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
KCNIP4-207ENST00000509207 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
KCNIP4-207ENST00000509207 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
KCNIP4-207ENST00000509207 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
KCNIP4-207ENST00000509207 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
KCNIP4-207ENST00000509207 KCNA4P22459 653 aa15.15■□□□□ 0.02
KCNIP4-207ENST00000509207 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
KCNIP4-207ENST00000509207 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
KCNIP4-207ENST00000509207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
KCNIP4-207ENST00000509207 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
KCNIP4-207ENST00000509207 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
KCNIP4-207ENST00000509207 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
KCNIP4-207ENST00000509207 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
KCNIP4-207ENST00000509207 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
KCNIP4-207ENST00000509207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
KCNIP4-207ENST00000509207 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
KCNIP4-207ENST00000509207 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
KCNIP4-207ENST00000509207 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
KCNIP4-207ENST00000509207 APLP2Q06481 763 aa14.06□□□□□ -0.16
KCNIP4-207ENST00000509207 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
KCNIP4-207ENST00000509207 CAPN15O75808 1086 aa14.05□□□□□ -0.16
KCNIP4-207ENST00000509207 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
KCNIP4-207ENST00000509207 ZBTB22O15209 634 aa13.92□□□□□ -0.18
KCNIP4-207ENST00000509207 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
KCNIP4-207ENST00000509207 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.19
KCNIP4-207ENST00000509207 DSG3P32926 999 aa13.9□□□□□ -0.19
KCNIP4-207ENST00000509207 ABCB7O75027 752 aa13.74□□□□□ -0.21
KCNIP4-207ENST00000509207 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
KCNIP4-207ENST00000509207 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
KCNIP4-207ENST00000509207 POLA2Q14181 598 aa13.59□□□□□ -0.23
KCNIP4-207ENST00000509207 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
KCNIP4-207ENST00000509207 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
KCNIP4-207ENST00000509207 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
KCNIP4-207ENST00000509207 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
KCNIP4-207ENST00000509207 FBLN2P98095 1184 aa13.16□□□□□ -0.3
KCNIP4-207ENST00000509207 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
KCNIP4-207ENST00000509207 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
KCNIP4-207ENST00000509207 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
KCNIP4-207ENST00000509207 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
KCNIP4-207ENST00000509207 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
KCNIP4-207ENST00000509207 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
KCNIP4-207ENST00000509207 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
KCNIP4-207ENST00000509207 POTEHQ6S545 545 aa12.86□□□□□ -0.35
KCNIP4-207ENST00000509207 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
KCNIP4-207ENST00000509207 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
KCNIP4-207ENST00000509207 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
KCNIP4-207ENST00000509207 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
KCNIP4-207ENST00000509207 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
KCNIP4-207ENST00000509207 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
KCNIP4-207ENST00000509207 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
KCNIP4-207ENST00000509207 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
KCNIP4-207ENST00000509207 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
KCNIP4-207ENST00000509207 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
KCNIP4-207ENST00000509207 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
KCNIP4-207ENST00000509207 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
KCNIP4-207ENST00000509207 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
KCNIP4-207ENST00000509207 PROM2Q8N271 834 aa12.37□□□□□ -0.43
KCNIP4-207ENST00000509207 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
KCNIP4-207ENST00000509207 HAX1O00165 279 aa12.3□□□□□ -0.44
KCNIP4-207ENST00000509207 FKBP8Q14318 412 aa12.28□□□□□ -0.44
KCNIP4-207ENST00000509207 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
KCNIP4-207ENST00000509207 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
KCNIP4-207ENST00000509207 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
KCNIP4-207ENST00000509207 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
KCNIP4-207ENST00000509207 EVX2Q03828 476 aa12.13□□□□□ -0.47
KCNIP4-207ENST00000509207 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
KCNIP4-207ENST00000509207 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
KCNIP4-207ENST00000509207 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
KCNIP4-207ENST00000509207 PLEKHG5O94827 1062 aa12□□□□□ -0.49
KCNIP4-207ENST00000509207 MIER1Q8N108 512 aa12□□□□□ -0.49
KCNIP4-207ENST00000509207 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
KCNIP4-207ENST00000509207 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
KCNIP4-207ENST00000509207 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
KCNIP4-207ENST00000509207 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
KCNIP4-207ENST00000509207 GABBR2O75899 941 aa11.9□□□□□ -0.5
KCNIP4-207ENST00000509207 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
KCNIP4-207ENST00000509207 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
KCNIP4-207ENST00000509207 CLCN6P51797 869 aa11.86□□□□□ -0.51
KCNIP4-207ENST00000509207 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
KCNIP4-207ENST00000509207 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
KCNIP4-207ENST00000509207 PHF12Q96QT6 1004 aa11.78□□□□□ -0.52
KCNIP4-207ENST00000509207 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
KCNIP4-207ENST00000509207 NUBP1P53384 320 aa11.73□□□□□ -0.53
KCNIP4-207ENST00000509207 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms