RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ARHGAP5Q13017 1502 aa35.73■■■■□ 3.31
PACRGL-220ENST00000508952 ADAMTSL3P82987 1691 aa35.72■■■■□ 3.31
PACRGL-220ENST00000508952 ARID4BQ4LE39 1312 aaPredicted RBP35.7■■■■□ 3.31
PACRGL-220ENST00000508952 BCORL1Q5H9F3 1711 aa35.7■■■■□ 3.31
PACRGL-220ENST00000508952 ZFYVE16Q7Z3T8 1539 aa35.7■■■■□ 3.31
PACRGL-220ENST00000508952 YEATS2Q9ULM3 1422 aa35.69■■■■□ 3.3
PACRGL-220ENST00000508952 CDC42BPBQ9Y5S2 1711 aa35.69■■■■□ 3.3
PACRGL-220ENST00000508952 PREX2Q70Z35 1606 aa35.65■■■■□ 3.3
PACRGL-220ENST00000508952 MAGI2Q86UL8 1455 aa35.64■■■■□ 3.3
PACRGL-220ENST00000508952 SIGLEC1Q9BZZ2 1709 aa35.63■■■■□ 3.29
PACRGL-220ENST00000508952 MADDQ8WXG6 1647 aa35.62■■■■□ 3.29
PACRGL-220ENST00000508952 HECW2Q9P2P5 1572 aa35.62■■■■□ 3.29
PACRGL-220ENST00000508952 CEP162Q5TB80 1403 aa35.61■■■■□ 3.29
PACRGL-220ENST00000508952 PTPRMP28827 1452 aa35.59■■■■□ 3.29
PACRGL-220ENST00000508952 CDC42BPAQ5VT25 1732 aa35.58■■■■□ 3.29
PACRGL-220ENST00000508952 ZNF518AQ6AHZ1 1483 aa35.55■■■■□ 3.28
PACRGL-220ENST00000508952 KDM5CP41229 1560 aa35.52■■■■□ 3.28
PACRGL-220ENST00000508952 AFAP1Q8N556 730 aa35.51■■■■□ 3.28
PACRGL-220ENST00000508952 RIMS1Q86UR5 1692 aaKnown RBP35.5■■■■□ 3.27
PACRGL-220ENST00000508952 ABCC1P33527 1531 aa35.5■■■■□ 3.27
PACRGL-220ENST00000508952 ITSN2Q9NZM3 1697 aa35.48■■■■□ 3.27
PACRGL-220ENST00000508952 ATP10AO60312 1499 aa35.48■■■■□ 3.27
PACRGL-220ENST00000508952 ARHGEF12Q9NZN5 1544 aa35.47■■■■□ 3.27
PACRGL-220ENST00000508952 LOC105371045A0A1W2PR82 267 aa35.45■■■■□ 3.27
PACRGL-220ENST00000508952 C9orf84Q5VXU9 1444 aa35.44■■■■□ 3.26
PACRGL-220ENST00000508952 TRAPPC8Q9Y2L5 1435 aa35.43■■■■□ 3.26
PACRGL-220ENST00000508952 GPATCH8Q9UKJ3 1502 aaKnown RBP35.42■■■■□ 3.26
PACRGL-220ENST00000508952 MTUS2Q5JR59 1369 aa35.42■■■■□ 3.26
PACRGL-220ENST00000508952 MLECQ14165 292 aa35.42■■■■□ 3.26
PACRGL-220ENST00000508952 MYT1LQ9UL68 1186 aa35.41■■■■□ 3.26
PACRGL-220ENST00000508952 SAMD9LQ8IVG5 1584 aa35.39■■■■□ 3.26
PACRGL-220ENST00000508952 ZNF777Q9ULD5 760 aaPredicted RBP35.39■■■■□ 3.26
PACRGL-220ENST00000508952 DIP2CQ9Y2E4 1556 aa35.38■■■■□ 3.25
PACRGL-220ENST00000508952 ABCA6Q8N139 1617 aa35.37■■■■□ 3.25
PACRGL-220ENST00000508952 FER1L4A9Z1Z3 1794 aa35.37■■■■□ 3.25
PACRGL-220ENST00000508952 MLH3Q9UHC1 1453 aa35.35■■■■□ 3.25
PACRGL-220ENST00000508952 EHBP1L1Q8N3D4 1523 aa35.34■■■■□ 3.25
PACRGL-220ENST00000508952 CCNB3Q8WWL7 1395 aa35.34■■■■□ 3.25
PACRGL-220ENST00000508952 SYCP2Q9BX26 1530 aa35.32■■■■□ 3.25
PACRGL-220ENST00000508952 PLPPR3Q6T4P5 718 aa35.3■■■■□ 3.24
PACRGL-220ENST00000508952 KIDINS220Q9ULH0 1771 aa35.29■■■■□ 3.24
PACRGL-220ENST00000508952 CFDP1Q9UEE9 299 aaPredicted RBP35.28■■■■□ 3.24
PACRGL-220ENST00000508952 TIAM1Q13009 1591 aa35.28■■■■□ 3.24
PACRGL-220ENST00000508952 REREQ9P2R6 1566 aa35.27■■■■□ 3.24
PACRGL-220ENST00000508952 HNRNPMP52272 730 aaKnown RBP eCLIP35.24■■■■□ 3.23
PACRGL-220ENST00000508952 PLEKHH2Q8IVE3 1493 aa35.21■■■■□ 3.23
PACRGL-220ENST00000508952 VPS8Q8N3P4 1428 aa35.2■■■■□ 3.23
PACRGL-220ENST00000508952 LMTK3Q96Q04 1460 aa35.2■■■■□ 3.23
PACRGL-220ENST00000508952 KIAA1107Q9UPP5 1409 aa35.19■■■■□ 3.22
PACRGL-220ENST00000508952 SPAG9O60271 1321 aaKnown RBP35.16■■■■□ 3.22
PACRGL-220ENST00000508952 SUPT6HQ7KZ85 1726 aaKnown RBP35.15■■■■□ 3.22
PACRGL-220ENST00000508952 AGLP35573 1532 aa35.15■■■■□ 3.22
PACRGL-220ENST00000508952 ZNF644Q9H582 1327 aaPredicted RBP35.14■■■■□ 3.22
PACRGL-220ENST00000508952 NCOA2Q15596 1464 aa35.13■■■■□ 3.21
PACRGL-220ENST00000508952 ATP7AQ04656 1500 aa35.12■■■■□ 3.21
PACRGL-220ENST00000508952 INO80Q9ULG1 1556 aaPredicted RBP35.12■■■■□ 3.21
PACRGL-220ENST00000508952 CEBPAP49715 358 aaPredicted RBP35.08■■■■□ 3.21
PACRGL-220ENST00000508952 LRRC9Q6ZRR7 1453 aa35.03■■■■□ 3.2
PACRGL-220ENST00000508952 MBD5Q9P267 1494 aa35.03■■■■□ 3.2
PACRGL-220ENST00000508952 HSPA2P54652 639 aa35.03■■■■□ 3.2
PACRGL-220ENST00000508952 C3P01024 1663 aa34.99■■■■□ 3.19
PACRGL-220ENST00000508952 PREX1Q8TCU6 1659 aa34.98■■■■□ 3.19
PACRGL-220ENST00000508952 CAMSAP2Q08AD1 1489 aa34.98■■■■□ 3.19
PACRGL-220ENST00000508952 PLXNC1O60486 1568 aa34.98■■■■□ 3.19
PACRGL-220ENST00000508952 A2MP01023 1474 aa34.97■■■■□ 3.19
PACRGL-220ENST00000508952 ESF1Q9H501 851 aaKnown RBP34.96■■■■□ 3.19
PACRGL-220ENST00000508952 MAP3K1Q13233 1512 aa34.95■■■■□ 3.19
PACRGL-220ENST00000508952 ADGBQ8N7X0 1667 aa34.95■■■■□ 3.18
PACRGL-220ENST00000508952 KANK4Q5T7N3 995 aaPredicted RBP34.93■■■■□ 3.18
PACRGL-220ENST00000508952 CCDC141Q6ZP82 1450 aa34.9■■■■□ 3.18
PACRGL-220ENST00000508952 ILDR1Q86SU0 546 aaPredicted RBP34.89■■■■□ 3.18
PACRGL-220ENST00000508952 CNTLNQ9NXG0 1405 aa34.89■■■■□ 3.18
PACRGL-220ENST00000508952 RTEL1-TNFRSF6BF6WH68 1400 aa34.88■■■■□ 3.17
PACRGL-220ENST00000508952 SETD1BQ9UPS6 1966 aaKnown RBP34.86■■■■□ 3.17
PACRGL-220ENST00000508952 MROH2AA6NES4 1674 aa34.85■■■■□ 3.17
PACRGL-220ENST00000508952 UHRF1BP1Q6BDS2 1440 aa34.83■■■■□ 3.17
PACRGL-220ENST00000508952 ARHGEF5Q12774 1597 aa34.83■■■■□ 3.17
PACRGL-220ENST00000508952 CLTCQ00610 1675 aaKnown RBP34.82■■■■□ 3.17
PACRGL-220ENST00000508952 GGT6Q6P531 493 aa34.79■■■■□ 3.16
PACRGL-220ENST00000508952 RSPH4AQ5TD94 716 aa34.78■■■■□ 3.16
PACRGL-220ENST00000508952 MYOM3Q5VTT5 1437 aa34.77■■■■□ 3.16
PACRGL-220ENST00000508952 DHX29Q7Z478 1369 aaKnown RBP34.76■■■■□ 3.16
PACRGL-220ENST00000508952 ZMYM3Q14202 1370 aa34.75■■■■□ 3.15
PACRGL-220ENST00000508952 APLP2Q06481 763 aa34.73■■■■□ 3.15
PACRGL-220ENST00000508952 MIA2Q96PC5 1412 aa34.7■■■■□ 3.15
PACRGL-220ENST00000508952 STRCQ7RTU9 1775 aa34.69■■■■□ 3.14
PACRGL-220ENST00000508952 TSPY4P0CV99 314 aa34.69■■■■□ 3.14
PACRGL-220ENST00000508952 TSPY10P0CW01 314 aa34.69■■■■□ 3.14
PACRGL-220ENST00000508952 NPATQ14207 1427 aa34.68■■■■□ 3.14
PACRGL-220ENST00000508952 KIF3BO15066 747 aa34.65■■■■□ 3.14
PACRGL-220ENST00000508952 MAST1Q9Y2H9 1570 aa34.65■■■■□ 3.14
PACRGL-220ENST00000508952 PPP6R1Q9UPN7 881 aa34.64■■■■□ 3.14
PACRGL-220ENST00000508952 PTPRKQ15262 1439 aa34.61■■■■□ 3.13
PACRGL-220ENST00000508952 MYO3AQ8NEV4 1616 aa34.58■■■■□ 3.13
PACRGL-220ENST00000508952 PTPN23Q9H3S7 1636 aa34.58■■■■□ 3.13
PACRGL-220ENST00000508952 KDM5DQ9BY66 1539 aa34.55■■■■□ 3.12
PACRGL-220ENST00000508952 FBXO41Q8TF61 875 aa34.53■■■■□ 3.12
PACRGL-220ENST00000508952 CROCC2H7BZ55 1655 aa34.52■■■■□ 3.12
PACRGL-220ENST00000508952 ZNF142P52746 1687 aaPredicted RBP34.52■■■■□ 3.12
PACRGL-220ENST00000508952 DMRT2Q9Y5R5 561 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms