RNA–Protein interactions for RNA: ENST00000508183.5

SH3TC1-214, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 1,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-214ENST00000508183 MYO5CQ9NQX4 1742 aa29.42■■■□□ 2.3
SH3TC1-214ENST00000508183 EFCAB2Q5VUJ9 269 aa29.41■■■□□ 2.3
SH3TC1-214ENST00000508183 LRRC9Q6ZRR7 1453 aa29.4■■■□□ 2.3
SH3TC1-214ENST00000508183 RICTORQ6R327 1708 aa29.4■■■□□ 2.3
SH3TC1-214ENST00000508183 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
SH3TC1-214ENST00000508183 SCAPERQ9BY12 1400 aa29.36■■■□□ 2.29
SH3TC1-214ENST00000508183 ARHGEF40Q8TER5 1519 aa29.36■■■□□ 2.29
SH3TC1-214ENST00000508183 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
SH3TC1-214ENST00000508183 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
SH3TC1-214ENST00000508183 ZMYM4Q5VZL5 1548 aa29.34■■■□□ 2.29
SH3TC1-214ENST00000508183 POGZQ7Z3K3 1410 aa29.32■■■□□ 2.28
SH3TC1-214ENST00000508183 APLP2Q06481 763 aa29.32■■■□□ 2.28
SH3TC1-214ENST00000508183 MAGI2Q86UL8 1455 aa29.3■■■□□ 2.28
SH3TC1-214ENST00000508183 ZFYVE16Q7Z3T8 1539 aa29.29■■■□□ 2.28
SH3TC1-214ENST00000508183 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
SH3TC1-214ENST00000508183 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
SH3TC1-214ENST00000508183 CDC42BPAQ5VT25 1732 aa29.26■■■□□ 2.27
SH3TC1-214ENST00000508183 PREX2Q70Z35 1606 aa29.25■■■□□ 2.27
SH3TC1-214ENST00000508183 YEATS2Q9ULM3 1422 aa29.24■■■□□ 2.27
SH3TC1-214ENST00000508183 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
SH3TC1-214ENST00000508183 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
SH3TC1-214ENST00000508183 GPATCH8Q9UKJ3 1502 aaKnown RBP29.23■■■□□ 2.27
SH3TC1-214ENST00000508183 ADAMTSL3P82987 1691 aa29.21■■■□□ 2.27
SH3TC1-214ENST00000508183 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.27
SH3TC1-214ENST00000508183 CCNB3Q8WWL7 1395 aa29.19■■■□□ 2.26
SH3TC1-214ENST00000508183 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
SH3TC1-214ENST00000508183 PTPRMP28827 1452 aa29.16■■■□□ 2.26
SH3TC1-214ENST00000508183 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
SH3TC1-214ENST00000508183 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
SH3TC1-214ENST00000508183 MADDQ8WXG6 1647 aa29.13■■■□□ 2.25
SH3TC1-214ENST00000508183 ATP10AO60312 1499 aa29.13■■■□□ 2.25
SH3TC1-214ENST00000508183 KDM5CP41229 1560 aa29.12■■■□□ 2.25
SH3TC1-214ENST00000508183 ABCC1P33527 1531 aa29.12■■■□□ 2.25
SH3TC1-214ENST00000508183 HECW2Q9P2P5 1572 aa29.12■■■□□ 2.25
SH3TC1-214ENST00000508183 C9orf84Q5VXU9 1444 aa29.11■■■□□ 2.25
SH3TC1-214ENST00000508183 ZNF777Q9ULD5 760 aaPredicted RBP29.09■■■□□ 2.25
SH3TC1-214ENST00000508183 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
SH3TC1-214ENST00000508183 SAMD9LQ8IVG5 1584 aa29.07■■■□□ 2.24
SH3TC1-214ENST00000508183 MLECQ14165 292 aa29.06■■■□□ 2.24
SH3TC1-214ENST00000508183 CFDP1Q9UEE9 299 aaPredicted RBP29.06■■■□□ 2.24
SH3TC1-214ENST00000508183 MYOM3Q5VTT5 1437 aa29.05■■■□□ 2.24
SH3TC1-214ENST00000508183 TRAPPC8Q9Y2L5 1435 aa29.05■■■□□ 2.24
SH3TC1-214ENST00000508183 ARHGEF12Q9NZN5 1544 aa29.05■■■□□ 2.24
SH3TC1-214ENST00000508183 SIGLEC1Q9BZZ2 1709 aa29.04■■■□□ 2.24
SH3TC1-214ENST00000508183 MLH3Q9UHC1 1453 aa29.03■■■□□ 2.24
SH3TC1-214ENST00000508183 RIMS1Q86UR5 1692 aaKnown RBP29.03■■■□□ 2.24
SH3TC1-214ENST00000508183 ZNF644Q9H582 1327 aaPredicted RBP28.99■■■□□ 2.23
SH3TC1-214ENST00000508183 DIP2CQ9Y2E4 1556 aa28.99■■■□□ 2.23
SH3TC1-214ENST00000508183 PLEKHH2Q8IVE3 1493 aa28.98■■■□□ 2.23
SH3TC1-214ENST00000508183 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
SH3TC1-214ENST00000508183 MIA2Q96PC5 1412 aa28.96■■■□□ 2.23
SH3TC1-214ENST00000508183 CAMSAP2Q08AD1 1489 aa28.96■■■□□ 2.23
SH3TC1-214ENST00000508183 ABCA6Q8N139 1617 aa28.95■■■□□ 2.23
SH3TC1-214ENST00000508183 KIAA1107Q9UPP5 1409 aa28.95■■■□□ 2.22
SH3TC1-214ENST00000508183 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
SH3TC1-214ENST00000508183 FER1L4A9Z1Z3 1794 aa28.94■■■□□ 2.22
SH3TC1-214ENST00000508183 FGD6Q6ZV73 1430 aa28.94■■■□□ 2.22
SH3TC1-214ENST00000508183 REREQ9P2R6 1566 aa28.94■■■□□ 2.22
SH3TC1-214ENST00000508183 HNRNPMP52272 730 aaKnown RBP eCLIP28.94■■■□□ 2.225e-8■■■■□ 19.4
SH3TC1-214ENST00000508183 SPAG9O60271 1321 aaKnown RBP28.91■■■□□ 2.22
SH3TC1-214ENST00000508183 PTPN23Q9H3S7 1636 aa28.9■■■□□ 2.22
SH3TC1-214ENST00000508183 MBD5Q9P267 1494 aa28.89■■■□□ 2.22
SH3TC1-214ENST00000508183 KIDINS220Q9ULH0 1771 aa28.89■■■□□ 2.22
SH3TC1-214ENST00000508183 TCOF1Q13428 1488 aaKnown RBP28.86■■■□□ 2.21
SH3TC1-214ENST00000508183 AGLP35573 1532 aa28.85■■■□□ 2.21
SH3TC1-214ENST00000508183 ATP7AQ04656 1500 aa28.82■■■□□ 2.2
SH3TC1-214ENST00000508183 ESF1Q9H501 851 aaKnown RBP28.82■■■□□ 2.2
SH3TC1-214ENST00000508183 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
SH3TC1-214ENST00000508183 ARHGEF5Q12774 1597 aa28.81■■■□□ 2.2
SH3TC1-214ENST00000508183 INO80Q9ULG1 1556 aaPredicted RBP28.78■■■□□ 2.2
SH3TC1-214ENST00000508183 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
SH3TC1-214ENST00000508183 CEBPAP49715 358 aaPredicted RBP28.74■■■□□ 2.19
SH3TC1-214ENST00000508183 RRBP1Q9P2E9 1410 aaKnown RBP28.73■■■□□ 2.19
SH3TC1-214ENST00000508183 A2MP01023 1474 aa28.72■■■□□ 2.19
SH3TC1-214ENST00000508183 DNMT1P26358 1616 aaKnown RBP28.71■■■□□ 2.19
SH3TC1-214ENST00000508183 ABCC5O15440 1437 aa28.7■■■□□ 2.18
SH3TC1-214ENST00000508183 CNTLNQ9NXG0 1405 aa28.7■■■□□ 2.18
SH3TC1-214ENST00000508183 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
SH3TC1-214ENST00000508183 RSPH4AQ5TD94 716 aa28.69■■■□□ 2.18
SH3TC1-214ENST00000508183 CROCC2H7BZ55 1655 aa28.69■■■□□ 2.18
SH3TC1-214ENST00000508183 HSPA2P54652 639 aa28.69■■■□□ 2.18
SH3TC1-214ENST00000508183 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
SH3TC1-214ENST00000508183 DAPK1P53355 1430 aa28.68■■■□□ 2.18
SH3TC1-214ENST00000508183 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
SH3TC1-214ENST00000508183 ADGBQ8N7X0 1667 aa28.65■■■□□ 2.18
SH3TC1-214ENST00000508183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.65■■■□□ 2.188e-7■■■■□ 22.9
SH3TC1-214ENST00000508183 MAST1Q9Y2H9 1570 aa28.65■■■□□ 2.18
SH3TC1-214ENST00000508183 PREX1Q8TCU6 1659 aa28.64■■■□□ 2.18
SH3TC1-214ENST00000508183 SHANK2Q9UPX8 1470 aa28.63■■■□□ 2.17
SH3TC1-214ENST00000508183 UHRF1BP1Q6BDS2 1440 aa28.62■■■□□ 2.17
SH3TC1-214ENST00000508183 C3P01024 1663 aa28.61■■■□□ 2.17
SH3TC1-214ENST00000508183 TSPY4P0CV99 314 aa28.6■■■□□ 2.17
SH3TC1-214ENST00000508183 TSPY10P0CW01 314 aa28.6■■■□□ 2.17
SH3TC1-214ENST00000508183 GGT6Q6P531 493 aa28.6■■■□□ 2.17
SH3TC1-214ENST00000508183 PTPRKQ15262 1439 aa28.59■■■□□ 2.17
SH3TC1-214ENST00000508183 DHX29Q7Z478 1369 aaKnown RBP28.57■■■□□ 2.16
SH3TC1-214ENST00000508183 SETD1BQ9UPS6 1966 aaKnown RBP28.56■■■□□ 2.16
SH3TC1-214ENST00000508183 MROH2AA6NES4 1674 aa28.55■■■□□ 2.16
SH3TC1-214ENST00000508183 PPP6R1Q9UPN7 881 aa28.54■■■□□ 2.16
SH3TC1-214ENST00000508183 ZMYM3Q14202 1370 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms