RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SUPT6HQ7KZ85 1726 aaKnown RBP30.55■■■□□ 2.48
LMNA-221ENST00000506981 DENND4BO75064 1496 aaPredicted RBP30.55■■■□□ 2.48
LMNA-221ENST00000506981 ADGRL1O94910 1474 aa30.55■■■□□ 2.48
LMNA-221ENST00000506981 FRMPD1Q5SYB0 1578 aa30.54■■■□□ 2.48
LMNA-221ENST00000506981 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
LMNA-221ENST00000506981 MAP3K1Q13233 1512 aa30.5■■■□□ 2.47
LMNA-221ENST00000506981 RAPGEF3O95398 923 aa30.49■■■□□ 2.47
LMNA-221ENST00000506981 SCAPERQ9BY12 1400 aa30.47■■■□□ 2.47
LMNA-221ENST00000506981 CCNB3Q8WWL7 1395 aa30.46■■■□□ 2.47
LMNA-221ENST00000506981 APLP2Q06481 763 aa30.45■■■□□ 2.47
LMNA-221ENST00000506981 GPATCH8Q9UKJ3 1502 aaKnown RBP30.43■■■□□ 2.46
LMNA-221ENST00000506981 LRRC9Q6ZRR7 1453 aa30.43■■■□□ 2.46
LMNA-221ENST00000506981 ZMYM4Q5VZL5 1548 aa30.42■■■□□ 2.46
LMNA-221ENST00000506981 POGZQ7Z3K3 1410 aa30.42■■■□□ 2.46
LMNA-221ENST00000506981 ABCC1P33527 1531 aa30.41■■■□□ 2.46
LMNA-221ENST00000506981 NCOA2Q15596 1464 aa30.38■■■□□ 2.45
LMNA-221ENST00000506981 ARHGEF40Q8TER5 1519 aa30.38■■■□□ 2.45
LMNA-221ENST00000506981 SAMD9LQ8IVG5 1584 aa30.37■■■□□ 2.45
LMNA-221ENST00000506981 ZNF518AQ6AHZ1 1483 aa30.37■■■□□ 2.45
LMNA-221ENST00000506981 ZFYVE16Q7Z3T8 1539 aa30.34■■■□□ 2.45
LMNA-221ENST00000506981 CFDP1Q9UEE9 299 aaPredicted RBP30.34■■■□□ 2.45
LMNA-221ENST00000506981 ZNF777Q9ULD5 760 aaPredicted RBP30.34■■■□□ 2.45
LMNA-221ENST00000506981 MAGI2Q86UL8 1455 aa30.32■■■□□ 2.44
LMNA-221ENST00000506981 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
LMNA-221ENST00000506981 KDM5CP41229 1560 aa30.31■■■□□ 2.44
LMNA-221ENST00000506981 SYCP2Q9BX26 1530 aa30.3■■■□□ 2.44
LMNA-221ENST00000506981 HECW2Q9P2P5 1572 aa30.29■■■□□ 2.44
LMNA-221ENST00000506981 KANK4Q5T7N3 995 aaPredicted RBP30.27■■■□□ 2.44
LMNA-221ENST00000506981 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
LMNA-221ENST00000506981 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
LMNA-221ENST00000506981 MYT1LQ9UL68 1186 aa30.24■■■□□ 2.43
LMNA-221ENST00000506981 YEATS2Q9ULM3 1422 aa30.22■■■□□ 2.43
LMNA-221ENST00000506981 TRAPPC8Q9Y2L5 1435 aa30.22■■■□□ 2.43
LMNA-221ENST00000506981 AFAP1Q8N556 730 aa30.22■■■□□ 2.43
LMNA-221ENST00000506981 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
LMNA-221ENST00000506981 CAMSAP2Q08AD1 1489 aa30.17■■■□□ 2.42
LMNA-221ENST00000506981 MLH3Q9UHC1 1453 aa30.17■■■□□ 2.42
LMNA-221ENST00000506981 KIDINS220Q9ULH0 1771 aa30.16■■■□□ 2.42
LMNA-221ENST00000506981 KDM4FA0A1W2PPD8 638 aa30.16■■■□□ 2.42
LMNA-221ENST00000506981 HNRNPMP52272 730 aaKnown RBP eCLIP30.16■■■□□ 2.42
LMNA-221ENST00000506981 ARID4BQ4LE39 1312 aaPredicted RBP30.16■■■□□ 2.42
LMNA-221ENST00000506981 ABCA6Q8N139 1617 aa30.15■■■□□ 2.42
LMNA-221ENST00000506981 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
LMNA-221ENST00000506981 DIP2CQ9Y2E4 1556 aa30.15■■■□□ 2.42
LMNA-221ENST00000506981 MYOM3Q5VTT5 1437 aa30.14■■■□□ 2.42
LMNA-221ENST00000506981 ATP10AO60312 1499 aa30.14■■■□□ 2.42
LMNA-221ENST00000506981 C9orf84Q5VXU9 1444 aa30.13■■■□□ 2.41
LMNA-221ENST00000506981 ZNF644Q9H582 1327 aaPredicted RBP30.12■■■□□ 2.41
LMNA-221ENST00000506981 SIGLEC1Q9BZZ2 1709 aa30.1■■■□□ 2.41
LMNA-221ENST00000506981 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
LMNA-221ENST00000506981 SPAG9O60271 1321 aaKnown RBP30.09■■■□□ 2.41
LMNA-221ENST00000506981 ATP7AQ04656 1500 aa30.09■■■□□ 2.41
LMNA-221ENST00000506981 MIA2Q96PC5 1412 aa30.09■■■□□ 2.41
LMNA-221ENST00000506981 ADAMTSL3P82987 1691 aa30.08■■■□□ 2.41
LMNA-221ENST00000506981 REREQ9P2R6 1566 aa30.07■■■□□ 2.4
LMNA-221ENST00000506981 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
LMNA-221ENST00000506981 ARHGEF5Q12774 1597 aa30.06■■■□□ 2.4
LMNA-221ENST00000506981 CCDC141Q6ZP82 1450 aa30.06■■■□□ 2.4
LMNA-221ENST00000506981 PTPN23Q9H3S7 1636 aa30.03■■■□□ 2.4
LMNA-221ENST00000506981 ADGBQ8N7X0 1667 aa30.02■■■□□ 2.4
LMNA-221ENST00000506981 MADDQ8WXG6 1647 aa30.01■■■□□ 2.39
LMNA-221ENST00000506981 FER1L4A9Z1Z3 1794 aa30■■■□□ 2.39
LMNA-221ENST00000506981 RSPH4AQ5TD94 716 aa30■■■□□ 2.39
LMNA-221ENST00000506981 RIMS1Q86UR5 1692 aaKnown RBP29.98■■■□□ 2.39
LMNA-221ENST00000506981 FGD6Q6ZV73 1430 aa29.96■■■□□ 2.39
LMNA-221ENST00000506981 RTEL1-TNFRSF6BF6WH68 1400 aa29.95■■■□□ 2.38
LMNA-221ENST00000506981 AGLP35573 1532 aa29.94■■■□□ 2.38
LMNA-221ENST00000506981 CROCC2H7BZ55 1655 aa29.93■■■□□ 2.38
LMNA-221ENST00000506981 MLECQ14165 292 aa29.93■■■□□ 2.38
LMNA-221ENST00000506981 TSPY4P0CV99 314 aa29.91■■■□□ 2.38
LMNA-221ENST00000506981 TSPY10P0CW01 314 aa29.91■■■□□ 2.38
LMNA-221ENST00000506981 A2MP01023 1474 aa29.9■■■□□ 2.38
LMNA-221ENST00000506981 MAST1Q9Y2H9 1570 aa29.9■■■□□ 2.38
LMNA-221ENST00000506981 TCOF1Q13428 1488 aaKnown RBP29.89■■■□□ 2.38
LMNA-221ENST00000506981 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
LMNA-221ENST00000506981 DNMT1P26358 1616 aaKnown RBP29.86■■■□□ 2.37
LMNA-221ENST00000506981 PTPRMP28827 1452 aa29.86■■■□□ 2.37
LMNA-221ENST00000506981 PPARGC1BQ86YN6 1023 aaKnown RBP29.8■■■□□ 2.36
LMNA-221ENST00000506981 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
LMNA-221ENST00000506981 DAPK1P53355 1430 aa29.78■■■□□ 2.36
LMNA-221ENST00000506981 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
LMNA-221ENST00000506981 ESF1Q9H501 851 aaKnown RBP29.76■■■□□ 2.35
LMNA-221ENST00000506981 ABCC5O15440 1437 aa29.76■■■□□ 2.35
LMNA-221ENST00000506981 DHX29Q7Z478 1369 aaKnown RBP29.76■■■□□ 2.35
LMNA-221ENST00000506981 MROH2AA6NES4 1674 aa29.7■■■□□ 2.35
LMNA-221ENST00000506981 EIF2AK4Q9P2K8 1649 aaKnown RBP29.7■■■□□ 2.34
LMNA-221ENST00000506981 PLPPR3Q6T4P5 718 aa29.69■■■□□ 2.34
LMNA-221ENST00000506981 CNTLNQ9NXG0 1405 aa29.69■■■□□ 2.34
LMNA-221ENST00000506981 C3P01024 1663 aa29.69■■■□□ 2.34
LMNA-221ENST00000506981 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
LMNA-221ENST00000506981 DUOX2Q9NRD8 1548 aa29.67■■■□□ 2.34
LMNA-221ENST00000506981 GGT6Q6P531 493 aa29.65■■■□□ 2.34
LMNA-221ENST00000506981 KIF3BO15066 747 aa29.64■■■□□ 2.34
LMNA-221ENST00000506981 ANKRD30AQ9BXX3 1397 aa29.63■■■□□ 2.33
LMNA-221ENST00000506981 KIF15Q9NS87 1388 aa29.63■■■□□ 2.33
LMNA-221ENST00000506981 RNF17Q9BXT8 1623 aaKnown RBP29.61■■■□□ 2.33
LMNA-221ENST00000506981 FAM135AQ9P2D6 1515 aa29.6■■■□□ 2.33
LMNA-221ENST00000506981 SETD1BQ9UPS6 1966 aaKnown RBP29.59■■■□□ 2.33
LMNA-221ENST00000506981 CHIC2Q9UKJ5 165 aa29.59■■■□□ 2.33
LMNA-221ENST00000506981 ADGRL2O95490 1459 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms