RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 HS3ST6Q96QI5 342 aa6.94□□□□□ -1.3
TRAPPC11-205ENST00000506426 C3orf67Q6ZVT6 689 aa6.93□□□□□ -1.3
TRAPPC11-205ENST00000506426 RYDENQ9NUL5 291 aaKnown RBP6.93□□□□□ -1.3
TRAPPC11-205ENST00000506426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRAPPC11-205ENST00000506426 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
TRAPPC11-205ENST00000506426 STK24Q9Y6E0 443 aa6.91□□□□□ -1.3
TRAPPC11-205ENST00000506426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC11-205ENST00000506426 PSEN1P49768 467 aa6.9□□□□□ -1.3
TRAPPC11-205ENST00000506426 GOLGA2Q08379 1002 aa6.9□□□□□ -1.3
TRAPPC11-205ENST00000506426 ZFP91Q96JP5 570 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC11-205ENST00000506426 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC11-205ENST00000506426 L3MBTL3Q96JM7 780 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-205ENST00000506426 HOXB3P14651 431 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-205ENST00000506426 ZNF467Q7Z7K2 595 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC11-205ENST00000506426 ILDR1Q86SU0 546 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC11-205ENST00000506426 CABP2Q9NPB3 220 aa6.85□□□□□ -1.31
TRAPPC11-205ENST00000506426 BOLA1Q9Y3E2 137 aa6.81□□□□□ -1.32
TRAPPC11-205ENST00000506426 PDAP1Q13442 181 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-205ENST00000506426 P3H3Q8IVL6 736 aa6.78□□□□□ -1.32
TRAPPC11-205ENST00000506426 ERBB3P21860 1342 aa6.77□□□□□ -1.32
TRAPPC11-205ENST00000506426 HOXB1P14653 301 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC11-205ENST00000506426 TMEM92Q6UXU6 159 aa6.77□□□□□ -1.33
TRAPPC11-205ENST00000506426 ZNF710Q8N1W2 664 aa6.77□□□□□ -1.33
TRAPPC11-205ENST00000506426 WDR70Q9NW82 654 aa6.77□□□□□ -1.33
TRAPPC11-205ENST00000506426 VARS2Q5ST30 1063 aaKnown RBP6.76□□□□□ -1.33
TRAPPC11-205ENST00000506426 EFCAB3Q8N7B9 438 aa6.75□□□□□ -1.33
TRAPPC11-205ENST00000506426 G3V3G9 751 aa6.74□□□□□ -1.33
TRAPPC11-205ENST00000506426 RNF166Q96A37 237 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-205ENST00000506426 DOK7Q18PE1 504 aa6.71□□□□□ -1.34
TRAPPC11-205ENST00000506426 CADPS2Q86UW7 1296 aa6.71□□□□□ -1.34
TRAPPC11-205ENST00000506426 KHSRPQ92945 711 aaKnown RBP eCLIP6.7□□□□□ -1.342e-7■■■■■ 31.2
TRAPPC11-205ENST00000506426 MFRPQ9BY79 579 aa6.7□□□□□ -1.34
TRAPPC11-205ENST00000506426 MYT1LQ9UL68 1186 aa6.69□□□□□ -1.34
TRAPPC11-205ENST00000506426 SOX12O15370 315 aa6.68□□□□□ -1.34
TRAPPC11-205ENST00000506426 NLRP6P59044 892 aa6.68□□□□□ -1.34
TRAPPC11-205ENST00000506426 MICALL2Q8IY33 904 aa6.68□□□□□ -1.34
TRAPPC11-205ENST00000506426 KCNV2Q8TDN2 545 aa6.68□□□□□ -1.34
TRAPPC11-205ENST00000506426 MS4A4AQ96JQ5 239 aa6.68□□□□□ -1.34
TRAPPC11-205ENST00000506426 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
TRAPPC11-205ENST00000506426 TULP1O00294 542 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-205ENST00000506426 ARSIQ5FYB1 569 aa6.66□□□□□ -1.34
TRAPPC11-205ENST00000506426 ANKRD13DQ6ZTN6 518 aa6.65□□□□□ -1.34
TRAPPC11-205ENST00000506426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRAPPC11-205ENST00000506426 ZNF687Q8N1G0 1237 aa6.65□□□□□ -1.34
TRAPPC11-205ENST00000506426 RIMBP2O15034 1052 aa6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 PPP1R37O75864 691 aa6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 LMOD2Q6P5Q4 547 aa6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 FBXO22Q8NEZ5 403 aa6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 ARHGEF1Q92888 912 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 PHF8Q9UPP1 1060 aa6.64□□□□□ -1.35
TRAPPC11-205ENST00000506426 E2F4Q16254 413 aa6.62□□□□□ -1.35
TRAPPC11-205ENST00000506426 TMEM132AQ24JP5 1023 aa6.6□□□□□ -1.35
TRAPPC11-205ENST00000506426 PDE4AP27815 886 aa6.59□□□□□ -1.35
TRAPPC11-205ENST00000506426 POTEEQ6S8J3 1075 aa6.59□□□□□ -1.35
TRAPPC11-205ENST00000506426 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.35
TRAPPC11-205ENST00000506426 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
TRAPPC11-205ENST00000506426 AXIN2Q9Y2T1 843 aa6.58□□□□□ -1.36
TRAPPC11-205ENST00000506426 ZNF316A6NFI3 1004 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC11-205ENST00000506426 LSM11P83369 360 aaKnown RBP eCLIP6.56□□□□□ -1.36
TRAPPC11-205ENST00000506426 ERICH6Q7L0X2 663 aa6.56□□□□□ -1.36
TRAPPC11-205ENST00000506426 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
TRAPPC11-205ENST00000506426 NUDT7P0C024 238 aa6.55□□□□□ -1.36
TRAPPC11-205ENST00000506426 NCKAP5LQ9HCH0 1330 aa6.54□□□□□ -1.36
TRAPPC11-205ENST00000506426 TESPA1A2RU30 521 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC11-205ENST00000506426 SEMA3EO15041 775 aa6.54□□□□□ -1.36
TRAPPC11-205ENST00000506426 SMYD5Q6GMV2 418 aa6.54□□□□□ -1.36
TRAPPC11-205ENST00000506426 MFSD10Q14728 455 aa6.53□□□□□ -1.36
TRAPPC11-205ENST00000506426 ZC3H15Q8WU90 426 aaKnown RBP6.53□□□□□ -1.36
TRAPPC11-205ENST00000506426 DDX27Q96GQ7 796 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-205ENST00000506426 CRISPLD2Q9H0B8 497 aa6.52□□□□□ -1.37
TRAPPC11-205ENST00000506426 C2orf72A6NCS6 295 aa6.51□□□□□ -1.37
TRAPPC11-205ENST00000506426 TIMELESSQ9UNS1 1208 aa6.51□□□□□ -1.37
TRAPPC11-205ENST00000506426 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
TRAPPC11-205ENST00000506426 ARIH1Q9Y4X5 557 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-205ENST00000506426 KIF3CO14782 793 aa6.49□□□□□ -1.37
TRAPPC11-205ENST00000506426 PTGER2P43116 358 aa6.49□□□□□ -1.37
TRAPPC11-205ENST00000506426 PLA2G2EQ9NZK7 142 aa6.49□□□□□ -1.37
TRAPPC11-205ENST00000506426 BRPF1P55201 1214 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC11-205ENST00000506426 CAMK2BQ13554 666 aa6.48□□□□□ -1.37
TRAPPC11-205ENST00000506426 SLC24A3Q9HC58 644 aa6.47□□□□□ -1.37
TRAPPC11-205ENST00000506426 PCDHGA4Q9Y5G9 962 aa6.46□□□□□ -1.38
TRAPPC11-205ENST00000506426 ZMYND10O75800 440 aa6.45□□□□□ -1.38
TRAPPC11-205ENST00000506426 NEUROD2Q15784 382 aa6.45□□□□□ -1.38
TRAPPC11-205ENST00000506426 GPHNQ9NQX3 736 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC11-205ENST00000506426 PSEN2P49810 448 aa6.43□□□□□ -1.38
TRAPPC11-205ENST00000506426 PPP1R15BQ5SWA1 713 aa6.43□□□□□ -1.38
TRAPPC11-205ENST00000506426 DMRTA1Q5VZB9 504 aa6.43□□□□□ -1.38
TRAPPC11-205ENST00000506426 ADGRD1Q6QNK2 874 aa6.43□□□□□ -1.38
TRAPPC11-205ENST00000506426 PBX2P40425 430 aa6.42□□□□□ -1.38
TRAPPC11-205ENST00000506426 BARGINQ6ZT62 677 aa6.42□□□□□ -1.38
TRAPPC11-205ENST00000506426 C14orf37Q86TY3 774 aa6.41□□□□□ -1.38
TRAPPC11-205ENST00000506426 HCSTQ9UBK5 93 aa6.41□□□□□ -1.38
TRAPPC11-205ENST00000506426 SPDYE16A6NNV3 312 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 ARHGAP33O14559 1287 aa6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 SLC34A2O95436 690 aa6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 RBM26Q5T8P6 1007 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 GPIHBP1Q8IV16 184 aa6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 KRI1Q8N9T8 703 aaKnown RBP6.39□□□□□ -1.39
TRAPPC11-205ENST00000506426 AK7Q96M32 723 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms