RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 AKNAQ7Z591 1439 aa31.24■■■□□ 2.59
SMIM20-201ENST00000506197 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
SMIM20-201ENST00000506197 KANK4Q5T7N3 995 aaPredicted RBP31.21■■■□□ 2.59
SMIM20-201ENST00000506197 DENND4BO75064 1496 aaPredicted RBP31.21■■■□□ 2.59
SMIM20-201ENST00000506197 MYO5CQ9NQX4 1742 aa31.19■■■□□ 2.58
SMIM20-201ENST00000506197 ARHGEF40Q8TER5 1519 aa31.16■■■□□ 2.58
SMIM20-201ENST00000506197 PLCH2O75038 1416 aa31.15■■■□□ 2.58
SMIM20-201ENST00000506197 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
SMIM20-201ENST00000506197 ZMYM4Q5VZL5 1548 aa31.1■■■□□ 2.57
SMIM20-201ENST00000506197 NCOA2Q15596 1464 aa31.08■■■□□ 2.57
SMIM20-201ENST00000506197 ADAMTSL3P82987 1691 aa31.06■■■□□ 2.56
SMIM20-201ENST00000506197 BCORL1Q5H9F3 1711 aa31.04■■■□□ 2.56
SMIM20-201ENST00000506197 POGZQ7Z3K3 1410 aa31.03■■■□□ 2.56
SMIM20-201ENST00000506197 ZFYVE16Q7Z3T8 1539 aa31.03■■■□□ 2.56
SMIM20-201ENST00000506197 SCAPERQ9BY12 1400 aa31.02■■■□□ 2.56
SMIM20-201ENST00000506197 ITSN2Q9NZM3 1697 aa31.02■■■□□ 2.56
SMIM20-201ENST00000506197 ARHGAP5Q13017 1502 aa31.01■■■□□ 2.55
SMIM20-201ENST00000506197 CDC42BPAQ5VT25 1732 aa31.01■■■□□ 2.55
SMIM20-201ENST00000506197 CCNB3Q8WWL7 1395 aa31■■■□□ 2.55
SMIM20-201ENST00000506197 HECW2Q9P2P5 1572 aa31■■■□□ 2.55
SMIM20-201ENST00000506197 EFCAB2Q5VUJ9 269 aa30.99■■■□□ 2.55
SMIM20-201ENST00000506197 MAGI2Q86UL8 1455 aa30.99■■■□□ 2.55
SMIM20-201ENST00000506197 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
SMIM20-201ENST00000506197 CDC42BPBQ9Y5S2 1711 aa30.97■■■□□ 2.55
SMIM20-201ENST00000506197 PREX2Q70Z35 1606 aa30.96■■■□□ 2.55
SMIM20-201ENST00000506197 YEATS2Q9ULM3 1422 aa30.96■■■□□ 2.55
SMIM20-201ENST00000506197 MADDQ8WXG6 1647 aa30.95■■■□□ 2.55
SMIM20-201ENST00000506197 PTPRMP28827 1452 aa30.92■■■□□ 2.54
SMIM20-201ENST00000506197 GPATCH8Q9UKJ3 1502 aaKnown RBP30.92■■■□□ 2.54
SMIM20-201ENST00000506197 SIGLEC1Q9BZZ2 1709 aa30.91■■■□□ 2.54
SMIM20-201ENST00000506197 MYOM3Q5VTT5 1437 aa30.9■■■□□ 2.54
SMIM20-201ENST00000506197 ZNF518AQ6AHZ1 1483 aa30.89■■■□□ 2.54
SMIM20-201ENST00000506197 RIMS1Q86UR5 1692 aaKnown RBP30.87■■■□□ 2.53
SMIM20-201ENST00000506197 KDM5CP41229 1560 aa30.86■■■□□ 2.53
SMIM20-201ENST00000506197 ABCC1P33527 1531 aa30.83■■■□□ 2.53
SMIM20-201ENST00000506197 CFDP1Q9UEE9 299 aaPredicted RBP30.83■■■□□ 2.53
SMIM20-201ENST00000506197 ATP10AO60312 1499 aa30.81■■■□□ 2.52
SMIM20-201ENST00000506197 C9orf84Q5VXU9 1444 aa30.81■■■□□ 2.52
SMIM20-201ENST00000506197 MIA2Q96PC5 1412 aa30.81■■■□□ 2.52
SMIM20-201ENST00000506197 FGD6Q6ZV73 1430 aa30.79■■■□□ 2.52
SMIM20-201ENST00000506197 FER1L4A9Z1Z3 1794 aa30.77■■■□□ 2.52
SMIM20-201ENST00000506197 PTPN23Q9H3S7 1636 aa30.76■■■□□ 2.52
SMIM20-201ENST00000506197 AFAP1Q8N556 730 aa30.76■■■□□ 2.51
SMIM20-201ENST00000506197 ZNF777Q9ULD5 760 aaPredicted RBP30.76■■■□□ 2.51
SMIM20-201ENST00000506197 ARHGEF12Q9NZN5 1544 aa30.74■■■□□ 2.51
SMIM20-201ENST00000506197 SAMD9LQ8IVG5 1584 aa30.74■■■□□ 2.51
SMIM20-201ENST00000506197 DIP2CQ9Y2E4 1556 aa30.74■■■□□ 2.51
SMIM20-201ENST00000506197 ABCA6Q8N139 1617 aa30.72■■■□□ 2.51
SMIM20-201ENST00000506197 TRAPPC8Q9Y2L5 1435 aa30.72■■■□□ 2.51
SMIM20-201ENST00000506197 CAMSAP2Q08AD1 1489 aa30.71■■■□□ 2.51
SMIM20-201ENST00000506197 MLH3Q9UHC1 1453 aa30.7■■■□□ 2.51
SMIM20-201ENST00000506197 MLECQ14165 292 aa30.7■■■□□ 2.51
SMIM20-201ENST00000506197 MYT1LQ9UL68 1186 aa30.7■■■□□ 2.51
SMIM20-201ENST00000506197 PLEKHH2Q8IVE3 1493 aa30.69■■■□□ 2.5
SMIM20-201ENST00000506197 REREQ9P2R6 1566 aa30.67■■■□□ 2.5
SMIM20-201ENST00000506197 RRBP1Q9P2E9 1410 aaKnown RBP30.67■■■□□ 2.5
SMIM20-201ENST00000506197 TCOF1Q13428 1488 aaKnown RBP30.67■■■□□ 2.5
SMIM20-201ENST00000506197 SYCP2Q9BX26 1530 aa30.66■■■□□ 2.5
SMIM20-201ENST00000506197 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
SMIM20-201ENST00000506197 KIDINS220Q9ULH0 1771 aa30.64■■■□□ 2.5
SMIM20-201ENST00000506197 FAM50AQ14320 339 aaKnown RBP30.64■■■□□ 2.5
SMIM20-201ENST00000506197 LMTK3Q96Q04 1460 aa30.6■■■□□ 2.49
SMIM20-201ENST00000506197 KIAA1107Q9UPP5 1409 aa30.6■■■□□ 2.49
SMIM20-201ENST00000506197 PLPPR3Q6T4P5 718 aa30.59■■■□□ 2.49
SMIM20-201ENST00000506197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.57■■■□□ 2.48
SMIM20-201ENST00000506197 ARHGEF5Q12774 1597 aa30.56■■■□□ 2.48
SMIM20-201ENST00000506197 HNRNPMP52272 730 aaKnown RBP eCLIP30.55■■■□□ 2.48
SMIM20-201ENST00000506197 AGLP35573 1532 aa30.55■■■□□ 2.48
SMIM20-201ENST00000506197 DNMT1P26358 1616 aaKnown RBP30.53■■■□□ 2.48
SMIM20-201ENST00000506197 MBD5Q9P267 1494 aa30.51■■■□□ 2.48
SMIM20-201ENST00000506197 CROCC2H7BZ55 1655 aa30.51■■■□□ 2.47
SMIM20-201ENST00000506197 CCDC141Q6ZP82 1450 aa30.5■■■□□ 2.47
SMIM20-201ENST00000506197 INO80Q9ULG1 1556 aaPredicted RBP30.5■■■□□ 2.47
SMIM20-201ENST00000506197 ATP7AQ04656 1500 aa30.5■■■□□ 2.47
SMIM20-201ENST00000506197 RSPH4AQ5TD94 716 aa30.49■■■□□ 2.47
SMIM20-201ENST00000506197 SPAG9O60271 1321 aaKnown RBP30.48■■■□□ 2.47
SMIM20-201ENST00000506197 DAPK1P53355 1430 aa30.47■■■□□ 2.47
SMIM20-201ENST00000506197 PREX1Q8TCU6 1659 aa30.45■■■□□ 2.46
SMIM20-201ENST00000506197 ABCC5O15440 1437 aa30.43■■■□□ 2.46
SMIM20-201ENST00000506197 ITGAEP38570 1179 aa30.43■■■□□ 2.46
SMIM20-201ENST00000506197 TRIM26Q12899 539 aaPredicted RBP30.42■■■□□ 2.46
SMIM20-201ENST00000506197 TSPY4P0CV99 314 aa30.41■■■□□ 2.46
SMIM20-201ENST00000506197 TSPY10P0CW01 314 aa30.41■■■□□ 2.46
SMIM20-201ENST00000506197 C3P01024 1663 aa30.4■■■□□ 2.46
SMIM20-201ENST00000506197 SHANK2Q9UPX8 1470 aa30.4■■■□□ 2.46
SMIM20-201ENST00000506197 ADGBQ8N7X0 1667 aa30.39■■■□□ 2.46
SMIM20-201ENST00000506197 CEBPAP49715 358 aaPredicted RBP30.39■■■□□ 2.46
SMIM20-201ENST00000506197 PLXNC1O60486 1568 aa30.39■■■□□ 2.46
SMIM20-201ENST00000506197 MAST1Q9Y2H9 1570 aa30.38■■■□□ 2.45
SMIM20-201ENST00000506197 HSPA2P54652 639 aa30.38■■■□□ 2.45
SMIM20-201ENST00000506197 SETD1BQ9UPS6 1966 aaKnown RBP30.37■■■□□ 2.45
SMIM20-201ENST00000506197 ESF1Q9H501 851 aaKnown RBP30.36■■■□□ 2.45
SMIM20-201ENST00000506197 A2MP01023 1474 aa30.36■■■□□ 2.45
SMIM20-201ENST00000506197 CNTLNQ9NXG0 1405 aa30.34■■■□□ 2.45
SMIM20-201ENST00000506197 ILDR1Q86SU0 546 aaPredicted RBP30.33■■■□□ 2.45
SMIM20-201ENST00000506197 MROH2AA6NES4 1674 aa30.31■■■□□ 2.44
SMIM20-201ENST00000506197 RTEL1-TNFRSF6BF6WH68 1400 aa30.3■■■□□ 2.44
SMIM20-201ENST00000506197 PTPRKQ15262 1439 aa30.3■■■□□ 2.44
SMIM20-201ENST00000506197 CHIC2Q9UKJ5 165 aa30.3■■■□□ 2.44
SMIM20-201ENST00000506197 UHRF1BP1Q6BDS2 1440 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms