RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 SIGLEC1Q9BZZ2 1709 aa36.27■■■■□ 3.4
SUDS3P1-201ENST00000505831 EFCAB2Q5VUJ9 269 aa36.26■■■■□ 3.4
SUDS3P1-201ENST00000505831 MADDQ8WXG6 1647 aa36.25■■■■□ 3.39
SUDS3P1-201ENST00000505831 CDC42BPBQ9Y5S2 1711 aa36.24■■■■□ 3.39
SUDS3P1-201ENST00000505831 POGZQ7Z3K3 1410 aa36.24■■■■□ 3.39
SUDS3P1-201ENST00000505831 ZFYVE16Q7Z3T8 1539 aa36.24■■■■□ 3.39
SUDS3P1-201ENST00000505831 ARID4BQ4LE39 1312 aaPredicted RBP36.23■■■■□ 3.39
SUDS3P1-201ENST00000505831 CLIP1P30622 1438 aa36.23■■■■□ 3.39
SUDS3P1-201ENST00000505831 YEATS2Q9ULM3 1422 aa36.23■■■■□ 3.39
SUDS3P1-201ENST00000505831 CCDC18Q5T9S5 1454 aa36.21■■■■□ 3.39
SUDS3P1-201ENST00000505831 FYCO1Q9BQS8 1478 aa36.15■■■■□ 3.38
SUDS3P1-201ENST00000505831 ARHGAP5Q13017 1502 aa36.14■■■■□ 3.38
SUDS3P1-201ENST00000505831 RIMS1Q86UR5 1692 aaKnown RBP36.13■■■■□ 3.37
SUDS3P1-201ENST00000505831 PREX2Q70Z35 1606 aa36.11■■■■□ 3.37
SUDS3P1-201ENST00000505831 CDC42BPAQ5VT25 1732 aa36.09■■■■□ 3.37
SUDS3P1-201ENST00000505831 KDM5CP41229 1560 aa36.08■■■■□ 3.37
SUDS3P1-201ENST00000505831 ATP10AO60312 1499 aa36.06■■■■□ 3.36
SUDS3P1-201ENST00000505831 ZNF518AQ6AHZ1 1483 aa36.06■■■■□ 3.36
SUDS3P1-201ENST00000505831 AFAP1Q8N556 730 aa36.02■■■■□ 3.36
SUDS3P1-201ENST00000505831 FER1L4A9Z1Z3 1794 aa36.01■■■■□ 3.35
SUDS3P1-201ENST00000505831 C9orf84Q5VXU9 1444 aa35.99■■■■□ 3.35
SUDS3P1-201ENST00000505831 ITSN2Q9NZM3 1697 aa35.97■■■■□ 3.35
SUDS3P1-201ENST00000505831 ABCC1P33527 1531 aa35.97■■■■□ 3.35
SUDS3P1-201ENST00000505831 ARHGEF12Q9NZN5 1544 aa35.97■■■■□ 3.35
SUDS3P1-201ENST00000505831 MLH3Q9UHC1 1453 aa35.93■■■■□ 3.34
SUDS3P1-201ENST00000505831 LMTK3Q96Q04 1460 aa35.92■■■■□ 3.34
SUDS3P1-201ENST00000505831 DIP2CQ9Y2E4 1556 aa35.91■■■■□ 3.34
SUDS3P1-201ENST00000505831 MLECQ14165 292 aa35.91■■■■□ 3.34
SUDS3P1-201ENST00000505831 TRAPPC8Q9Y2L5 1435 aa35.91■■■■□ 3.34
SUDS3P1-201ENST00000505831 REREQ9P2R6 1566 aa35.89■■■■□ 3.34
SUDS3P1-201ENST00000505831 ABCA6Q8N139 1617 aa35.88■■■■□ 3.33
SUDS3P1-201ENST00000505831 GPATCH8Q9UKJ3 1502 aaKnown RBP35.88■■■■□ 3.33
SUDS3P1-201ENST00000505831 ILDR1Q86SU0 546 aaPredicted RBP35.87■■■■□ 3.33
SUDS3P1-201ENST00000505831 KIDINS220Q9ULH0 1771 aa35.86■■■■□ 3.33
SUDS3P1-201ENST00000505831 SAMD9LQ8IVG5 1584 aa35.84■■■■□ 3.33
SUDS3P1-201ENST00000505831 SETD1BQ9UPS6 1966 aaKnown RBP35.79■■■■□ 3.32
SUDS3P1-201ENST00000505831 CEP162Q5TB80 1403 aa35.78■■■■□ 3.32
SUDS3P1-201ENST00000505831 MYT1LQ9UL68 1186 aa35.77■■■■□ 3.32
SUDS3P1-201ENST00000505831 AGLP35573 1532 aa35.76■■■■□ 3.31
SUDS3P1-201ENST00000505831 PLPPR3Q6T4P5 718 aa35.74■■■■□ 3.31
SUDS3P1-201ENST00000505831 ZNF777Q9ULD5 760 aaPredicted RBP35.72■■■■□ 3.31
SUDS3P1-201ENST00000505831 MTUS2Q5JR59 1369 aa35.72■■■■□ 3.31
SUDS3P1-201ENST00000505831 SYCP2Q9BX26 1530 aa35.72■■■■□ 3.31
SUDS3P1-201ENST00000505831 KIAA1107Q9UPP5 1409 aa35.7■■■■□ 3.31
SUDS3P1-201ENST00000505831 CCNB3Q8WWL7 1395 aa35.68■■■■□ 3.3
SUDS3P1-201ENST00000505831 CFDP1Q9UEE9 299 aaPredicted RBP35.68■■■■□ 3.3
SUDS3P1-201ENST00000505831 PREX1Q8TCU6 1659 aa35.68■■■■□ 3.3
SUDS3P1-201ENST00000505831 HNRNPMP52272 730 aaKnown RBP eCLIP35.67■■■■□ 3.3
SUDS3P1-201ENST00000505831 CEBPAP49715 358 aaPredicted RBP35.66■■■■□ 3.3
SUDS3P1-201ENST00000505831 HSPA2P54652 639 aa35.66■■■■□ 3.3
SUDS3P1-201ENST00000505831 PLEKHH2Q8IVE3 1493 aa35.66■■■■□ 3.3
SUDS3P1-201ENST00000505831 EHBP1L1Q8N3D4 1523 aa35.65■■■■□ 3.3
SUDS3P1-201ENST00000505831 TIAM1Q13009 1591 aa35.64■■■■□ 3.3
SUDS3P1-201ENST00000505831 C3P01024 1663 aa35.63■■■■□ 3.29
SUDS3P1-201ENST00000505831 INO80Q9ULG1 1556 aaPredicted RBP35.59■■■■□ 3.29
SUDS3P1-201ENST00000505831 SPAG9O60271 1321 aaKnown RBP35.59■■■■□ 3.29
SUDS3P1-201ENST00000505831 ATP7AQ04656 1500 aa35.57■■■■□ 3.29
SUDS3P1-201ENST00000505831 SUPT6HQ7KZ85 1726 aaKnown RBP35.57■■■■□ 3.28
SUDS3P1-201ENST00000505831 LOC105371045A0A1W2PR82 267 aa35.55■■■■□ 3.28
SUDS3P1-201ENST00000505831 ZNF644Q9H582 1327 aaPredicted RBP35.53■■■■□ 3.28
SUDS3P1-201ENST00000505831 MBD5Q9P267 1494 aa35.51■■■■□ 3.28
SUDS3P1-201ENST00000505831 PLXNC1O60486 1568 aa35.51■■■■□ 3.27
SUDS3P1-201ENST00000505831 MROH2AA6NES4 1674 aa35.48■■■■□ 3.27
SUDS3P1-201ENST00000505831 STRCQ7RTU9 1775 aa35.48■■■■□ 3.27
SUDS3P1-201ENST00000505831 ADGBQ8N7X0 1667 aa35.47■■■■□ 3.27
SUDS3P1-201ENST00000505831 CNTLNQ9NXG0 1405 aa35.47■■■■□ 3.27
SUDS3P1-201ENST00000505831 A2MP01023 1474 aa35.45■■■■□ 3.27
SUDS3P1-201ENST00000505831 NCOA2Q15596 1464 aa35.45■■■■□ 3.27
SUDS3P1-201ENST00000505831 ESF1Q9H501 851 aaKnown RBP35.44■■■■□ 3.26
SUDS3P1-201ENST00000505831 FBXO41Q8TF61 875 aa35.43■■■■□ 3.26
SUDS3P1-201ENST00000505831 UHRF1BP1Q6BDS2 1440 aa35.42■■■■□ 3.26
SUDS3P1-201ENST00000505831 VPS8Q8N3P4 1428 aa35.42■■■■□ 3.26
SUDS3P1-201ENST00000505831 RTEL1-TNFRSF6BF6WH68 1400 aa35.39■■■■□ 3.26
SUDS3P1-201ENST00000505831 CLTCQ00610 1675 aaKnown RBP35.37■■■■□ 3.25
SUDS3P1-201ENST00000505831 ZMYM3Q14202 1370 aa35.34■■■■□ 3.25
SUDS3P1-201ENST00000505831 LRRC9Q6ZRR7 1453 aa35.33■■■■□ 3.25
SUDS3P1-201ENST00000505831 CAMSAP2Q08AD1 1489 aa35.32■■■■□ 3.24
SUDS3P1-201ENST00000505831 MAP3K1Q13233 1512 aa35.31■■■■□ 3.24
SUDS3P1-201ENST00000505831 NPATQ14207 1427 aa35.3■■■■□ 3.24
SUDS3P1-201ENST00000505831 RSPH4AQ5TD94 716 aa35.29■■■■□ 3.24
SUDS3P1-201ENST00000505831 CCDC141Q6ZP82 1450 aa35.28■■■■□ 3.24
SUDS3P1-201ENST00000505831 PPP6R1Q9UPN7 881 aa35.26■■■■□ 3.24
SUDS3P1-201ENST00000505831 DHX29Q7Z478 1369 aaKnown RBP35.25■■■■□ 3.23
SUDS3P1-201ENST00000505831 ARHGEF5Q12774 1597 aa35.25■■■■□ 3.23
SUDS3P1-201ENST00000505831 GGT6Q6P531 493 aa35.25■■■■□ 3.23
SUDS3P1-201ENST00000505831 DMRT2Q9Y5R5 561 aa35.25■■■■□ 3.23
SUDS3P1-201ENST00000505831 KANK4Q5T7N3 995 aaPredicted RBP35.21■■■■□ 3.23
SUDS3P1-201ENST00000505831 CERKQ8TCT0 537 aa35.19■■■■□ 3.22
SUDS3P1-201ENST00000505831 PTPRKQ15262 1439 aa35.18■■■■□ 3.22
SUDS3P1-201ENST00000505831 PTPRTO14522 1441 aa35.16■■■■□ 3.22
SUDS3P1-201ENST00000505831 ZNF142P52746 1687 aaPredicted RBP35.14■■■■□ 3.22
SUDS3P1-201ENST00000505831 NCOA1Q15788 1441 aa35.14■■■■□ 3.22
SUDS3P1-201ENST00000505831 MYO3AQ8NEV4 1616 aa35.13■■■■□ 3.21
SUDS3P1-201ENST00000505831 CAMSAP1Q5T5Y3 1602 aa35.1■■■■□ 3.21
SUDS3P1-201ENST00000505831 MAST1Q9Y2H9 1570 aa35.09■■■■□ 3.21
SUDS3P1-201ENST00000505831 KIF3BO15066 747 aa35.09■■■■□ 3.21
SUDS3P1-201ENST00000505831 MIA2Q96PC5 1412 aa35.08■■■■□ 3.21
SUDS3P1-201ENST00000505831 TSPY4P0CV99 314 aa35.08■■■■□ 3.21
SUDS3P1-201ENST00000505831 TSPY10P0CW01 314 aa35.08■■■■□ 3.21
SUDS3P1-201ENST00000505831 MYOM3Q5VTT5 1437 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms