RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
PRDM2-214ENST00000505823 PCF11O94913 1555 aaKnown RBP19.07■□□□□ 0.64
PRDM2-214ENST00000505823 ARID4BQ4LE39 1312 aaPredicted RBP19.07■□□□□ 0.64
PRDM2-214ENST00000505823 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
PRDM2-214ENST00000505823 MYO5CQ9NQX4 1742 aa19.04■□□□□ 0.64
PRDM2-214ENST00000505823 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
PRDM2-214ENST00000505823 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
PRDM2-214ENST00000505823 MTUS2Q5JR59 1369 aa19.02■□□□□ 0.64
PRDM2-214ENST00000505823 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
PRDM2-214ENST00000505823 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
PRDM2-214ENST00000505823 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
PRDM2-214ENST00000505823 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
PRDM2-214ENST00000505823 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
PRDM2-214ENST00000505823 LRRIQ1Q96JM4 1722 aa18.95■□□□□ 0.62
PRDM2-214ENST00000505823 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
PRDM2-214ENST00000505823 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
PRDM2-214ENST00000505823 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
PRDM2-214ENST00000505823 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
PRDM2-214ENST00000505823 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
PRDM2-214ENST00000505823 ZFYVE16Q7Z3T8 1539 aa18.94■□□□□ 0.62
PRDM2-214ENST00000505823 APLP2Q06481 763 aa18.93■□□□□ 0.62
PRDM2-214ENST00000505823 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
PRDM2-214ENST00000505823 ARHGEF40Q8TER5 1519 aa18.92■□□□□ 0.62
PRDM2-214ENST00000505823 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
PRDM2-214ENST00000505823 ATP10AO60312 1499 aa18.89■□□□□ 0.61
PRDM2-214ENST00000505823 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
PRDM2-214ENST00000505823 PREX2Q70Z35 1606 aa18.89■□□□□ 0.61
PRDM2-214ENST00000505823 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
PRDM2-214ENST00000505823 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
PRDM2-214ENST00000505823 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
PRDM2-214ENST00000505823 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
PRDM2-214ENST00000505823 GPATCH8Q9UKJ3 1502 aaKnown RBP18.85■□□□□ 0.61
PRDM2-214ENST00000505823 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
PRDM2-214ENST00000505823 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
PRDM2-214ENST00000505823 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
PRDM2-214ENST00000505823 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
PRDM2-214ENST00000505823 SPAG9O60271 1321 aaKnown RBP18.82■□□□□ 0.6
PRDM2-214ENST00000505823 MLECQ14165 292 aa18.82■□□□□ 0.6
PRDM2-214ENST00000505823 ABCC1P33527 1531 aa18.82■□□□□ 0.6
PRDM2-214ENST00000505823 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
PRDM2-214ENST00000505823 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
PRDM2-214ENST00000505823 KDM5CP41229 1560 aa18.81■□□□□ 0.6
PRDM2-214ENST00000505823 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 PTPRMP28827 1452 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
PRDM2-214ENST00000505823 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
PRDM2-214ENST00000505823 TRAPPC8Q9Y2L5 1435 aa18.78■□□□□ 0.6
PRDM2-214ENST00000505823 ITSN2Q9NZM3 1697 aa18.77■□□□□ 0.6
PRDM2-214ENST00000505823 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.59
PRDM2-214ENST00000505823 TIAM1Q13009 1591 aa18.76■□□□□ 0.59
PRDM2-214ENST00000505823 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
PRDM2-214ENST00000505823 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
PRDM2-214ENST00000505823 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
PRDM2-214ENST00000505823 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
PRDM2-214ENST00000505823 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
PRDM2-214ENST00000505823 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
PRDM2-214ENST00000505823 LRRC9Q6ZRR7 1453 aa18.72■□□□□ 0.59
PRDM2-214ENST00000505823 TSPY4P0CV99 314 aa18.72■□□□□ 0.59
PRDM2-214ENST00000505823 TSPY10P0CW01 314 aa18.72■□□□□ 0.59
PRDM2-214ENST00000505823 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
PRDM2-214ENST00000505823 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
PRDM2-214ENST00000505823 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
PRDM2-214ENST00000505823 RIMS1Q86UR5 1692 aaKnown RBP18.68■□□□□ 0.58
PRDM2-214ENST00000505823 AGLP35573 1532 aa18.68■□□□□ 0.58
PRDM2-214ENST00000505823 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
PRDM2-214ENST00000505823 ATP7AQ04656 1500 aa18.66■□□□□ 0.58
PRDM2-214ENST00000505823 ABCA6Q8N139 1617 aa18.66■□□□□ 0.58
PRDM2-214ENST00000505823 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
PRDM2-214ENST00000505823 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
PRDM2-214ENST00000505823 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
PRDM2-214ENST00000505823 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
PRDM2-214ENST00000505823 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
PRDM2-214ENST00000505823 CCDC141Q6ZP82 1450 aa18.63■□□□□ 0.57
PRDM2-214ENST00000505823 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
PRDM2-214ENST00000505823 A2MP01023 1474 aa18.62■□□□□ 0.57
PRDM2-214ENST00000505823 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
PRDM2-214ENST00000505823 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PRDM2-214ENST00000505823 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
PRDM2-214ENST00000505823 GGT6Q6P531 493 aa18.59■□□□□ 0.57
PRDM2-214ENST00000505823 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
PRDM2-214ENST00000505823 SIGLEC1Q9BZZ2 1709 aa18.58■□□□□ 0.57
PRDM2-214ENST00000505823 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
PRDM2-214ENST00000505823 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
PRDM2-214ENST00000505823 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
PRDM2-214ENST00000505823 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
PRDM2-214ENST00000505823 SETD1BQ9UPS6 1966 aaKnown RBP18.54■□□□□ 0.56
PRDM2-214ENST00000505823 KIF3BO15066 747 aa18.53■□□□□ 0.56
PRDM2-214ENST00000505823 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
PRDM2-214ENST00000505823 LMTK3Q96Q04 1460 aa18.52■□□□□ 0.56
PRDM2-214ENST00000505823 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
PRDM2-214ENST00000505823 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
PRDM2-214ENST00000505823 HSPA2P54652 639 aa18.49■□□□□ 0.55
PRDM2-214ENST00000505823 NPATQ14207 1427 aa18.48■□□□□ 0.55
PRDM2-214ENST00000505823 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
PRDM2-214ENST00000505823 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
PRDM2-214ENST00000505823 MROH2AA6NES4 1674 aa18.45■□□□□ 0.54
PRDM2-214ENST00000505823 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms