RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MYO5CQ9NQX4 1742 aa32.48■■■□□ 2.79
UBE2D3-220ENST00000505307 CCDC18Q5T9S5 1454 aa32.48■■■□□ 2.79
UBE2D3-220ENST00000505307 POGZQ7Z3K3 1410 aa32.48■■■□□ 2.79
UBE2D3-220ENST00000505307 ZFYVE16Q7Z3T8 1539 aa32.46■■■□□ 2.79
UBE2D3-220ENST00000505307 LRRIQ1Q96JM4 1722 aa32.42■■■□□ 2.78
UBE2D3-220ENST00000505307 YEATS2Q9ULM3 1422 aa32.42■■■□□ 2.78
UBE2D3-220ENST00000505307 PCF11O94913 1555 aaKnown RBP32.41■■■□□ 2.78
UBE2D3-220ENST00000505307 ARHGAP5Q13017 1502 aa32.39■■■□□ 2.78
UBE2D3-220ENST00000505307 MADDQ8WXG6 1647 aa32.38■■■□□ 2.77
UBE2D3-220ENST00000505307 FYCO1Q9BQS8 1478 aa32.38■■■□□ 2.77
UBE2D3-220ENST00000505307 ZNF518AQ6AHZ1 1483 aa32.35■■■□□ 2.77
UBE2D3-220ENST00000505307 ATP10AO60312 1499 aa32.32■■■□□ 2.76
UBE2D3-220ENST00000505307 ILDR1Q86SU0 546 aaPredicted RBP32.32■■■□□ 2.76
UBE2D3-220ENST00000505307 C9orf84Q5VXU9 1444 aa32.28■■■□□ 2.76
UBE2D3-220ENST00000505307 AFAP1Q8N556 730 aa32.26■■■□□ 2.75
UBE2D3-220ENST00000505307 RIMS1Q86UR5 1692 aaKnown RBP32.25■■■□□ 2.75
UBE2D3-220ENST00000505307 KDM5CP41229 1560 aa32.25■■■□□ 2.75
UBE2D3-220ENST00000505307 CDC42BPBQ9Y5S2 1711 aa32.25■■■□□ 2.75
UBE2D3-220ENST00000505307 PREX2Q70Z35 1606 aa32.24■■■□□ 2.75
UBE2D3-220ENST00000505307 SIGLEC1Q9BZZ2 1709 aa32.23■■■□□ 2.75
UBE2D3-220ENST00000505307 MLECQ14165 292 aa32.21■■■□□ 2.75
UBE2D3-220ENST00000505307 PLPPR3Q6T4P5 718 aa32.19■■■□□ 2.74
UBE2D3-220ENST00000505307 MYT1LQ9UL68 1186 aa32.19■■■□□ 2.74
UBE2D3-220ENST00000505307 MLH3Q9UHC1 1453 aa32.18■■■□□ 2.74
UBE2D3-220ENST00000505307 ABCC1P33527 1531 aa32.16■■■□□ 2.74
UBE2D3-220ENST00000505307 ARHGEF12Q9NZN5 1544 aa32.15■■■□□ 2.74
UBE2D3-220ENST00000505307 LMTK3Q96Q04 1460 aa32.14■■■□□ 2.74
UBE2D3-220ENST00000505307 CDC42BPAQ5VT25 1732 aa32.13■■■□□ 2.73
UBE2D3-220ENST00000505307 FER1L4A9Z1Z3 1794 aa32.12■■■□□ 2.73
UBE2D3-220ENST00000505307 TRAPPC8Q9Y2L5 1435 aa32.12■■■□□ 2.73
UBE2D3-220ENST00000505307 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
UBE2D3-220ENST00000505307 DIP2CQ9Y2E4 1556 aa32.09■■■□□ 2.73
UBE2D3-220ENST00000505307 GPATCH8Q9UKJ3 1502 aaKnown RBP32.09■■■□□ 2.73
UBE2D3-220ENST00000505307 ITSN2Q9NZM3 1697 aa32.08■■■□□ 2.73
UBE2D3-220ENST00000505307 MTUS2Q5JR59 1369 aa32.07■■■□□ 2.73
UBE2D3-220ENST00000505307 ZNF777Q9ULD5 760 aaPredicted RBP32.06■■■□□ 2.72
UBE2D3-220ENST00000505307 CEP162Q5TB80 1403 aa32.04■■■□□ 2.72
UBE2D3-220ENST00000505307 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
UBE2D3-220ENST00000505307 CFDP1Q9UEE9 299 aaPredicted RBP32.03■■■□□ 2.72
UBE2D3-220ENST00000505307 AGLP35573 1532 aa32.02■■■□□ 2.72
UBE2D3-220ENST00000505307 ABCA6Q8N139 1617 aa32.02■■■□□ 2.72
UBE2D3-220ENST00000505307 PLEKHH2Q8IVE3 1493 aa32.02■■■□□ 2.72
UBE2D3-220ENST00000505307 KIAA1107Q9UPP5 1409 aa32■■■□□ 2.71
UBE2D3-220ENST00000505307 SAMD9LQ8IVG5 1584 aa31.99■■■□□ 2.71
UBE2D3-220ENST00000505307 HSPA2P54652 639 aa31.97■■■□□ 2.71
UBE2D3-220ENST00000505307 KIDINS220Q9ULH0 1771 aa31.96■■■□□ 2.71
UBE2D3-220ENST00000505307 SPAG9O60271 1321 aaKnown RBP31.96■■■□□ 2.71
UBE2D3-220ENST00000505307 SYCP2Q9BX26 1530 aa31.95■■■□□ 2.71
UBE2D3-220ENST00000505307 HNRNPMP52272 730 aaKnown RBP eCLIP31.95■■■□□ 2.714e-13■■■■■ 32.7
UBE2D3-220ENST00000505307 ESF1Q9H501 851 aaKnown RBP31.94■■■□□ 2.7
UBE2D3-220ENST00000505307 EHBP1L1Q8N3D4 1523 aa31.94■■■□□ 2.7
UBE2D3-220ENST00000505307 CEBPAP49715 358 aaPredicted RBP31.92■■■□□ 2.7
UBE2D3-220ENST00000505307 PREX1Q8TCU6 1659 aa31.86■■■□□ 2.69
UBE2D3-220ENST00000505307 CNTLNQ9NXG0 1405 aa31.86■■■□□ 2.69
UBE2D3-220ENST00000505307 SETD1BQ9UPS6 1966 aaKnown RBP31.85■■■□□ 2.69
UBE2D3-220ENST00000505307 TIAM1Q13009 1591 aa31.84■■■□□ 2.69
UBE2D3-220ENST00000505307 ATP7AQ04656 1500 aa31.84■■■□□ 2.69
UBE2D3-220ENST00000505307 FBXO41Q8TF61 875 aa31.83■■■□□ 2.69
UBE2D3-220ENST00000505307 UHRF1BP1Q6BDS2 1440 aa31.82■■■□□ 2.68
UBE2D3-220ENST00000505307 INO80Q9ULG1 1556 aaPredicted RBP31.79■■■□□ 2.68
UBE2D3-220ENST00000505307 A2MP01023 1474 aa31.77■■■□□ 2.68
UBE2D3-220ENST00000505307 C3P01024 1663 aa31.76■■■□□ 2.68
UBE2D3-220ENST00000505307 ZNF644Q9H582 1327 aaPredicted RBP31.76■■■□□ 2.68
UBE2D3-220ENST00000505307 LOC105371045A0A1W2PR82 267 aa31.75■■■□□ 2.67
UBE2D3-220ENST00000505307 MBD5Q9P267 1494 aa31.75■■■□□ 2.67
UBE2D3-220ENST00000505307 VPS8Q8N3P4 1428 aa31.74■■■□□ 2.67
UBE2D3-220ENST00000505307 NCOA2Q15596 1464 aa31.73■■■□□ 2.67
UBE2D3-220ENST00000505307 SUPT6HQ7KZ85 1726 aaKnown RBP31.73■■■□□ 2.67
UBE2D3-220ENST00000505307 DMRT2Q9Y5R5 561 aa31.73■■■□□ 2.67
UBE2D3-220ENST00000505307 RTEL1-TNFRSF6BF6WH68 1400 aa31.73■■■□□ 2.67
UBE2D3-220ENST00000505307 PLXNC1O60486 1568 aa31.73■■■□□ 2.67
UBE2D3-220ENST00000505307 RSPH4AQ5TD94 716 aa31.72■■■□□ 2.67
UBE2D3-220ENST00000505307 PPP6R1Q9UPN7 881 aa31.7■■■□□ 2.67
UBE2D3-220ENST00000505307 MROH2AA6NES4 1674 aa31.68■■■□□ 2.66
UBE2D3-220ENST00000505307 ZMYM3Q14202 1370 aa31.68■■■□□ 2.66
UBE2D3-220ENST00000505307 NPATQ14207 1427 aa31.67■■■□□ 2.66
UBE2D3-220ENST00000505307 ADGBQ8N7X0 1667 aa31.67■■■□□ 2.66
UBE2D3-220ENST00000505307 GGT6Q6P531 493 aa31.63■■■□□ 2.65
UBE2D3-220ENST00000505307 CCDC141Q6ZP82 1450 aa31.63■■■□□ 2.65
UBE2D3-220ENST00000505307 LRRC9Q6ZRR7 1453 aa31.62■■■□□ 2.65
UBE2D3-220ENST00000505307 CAMSAP2Q08AD1 1489 aa31.61■■■□□ 2.65
UBE2D3-220ENST00000505307 DHX29Q7Z478 1369 aaKnown RBP31.61■■■□□ 2.65
UBE2D3-220ENST00000505307 MAP3K1Q13233 1512 aa31.6■■■□□ 2.65
UBE2D3-220ENST00000505307 CERKQ8TCT0 537 aa31.58■■■□□ 2.65
UBE2D3-220ENST00000505307 STRCQ7RTU9 1775 aa31.58■■■□□ 2.65
UBE2D3-220ENST00000505307 CLTCQ00610 1675 aaKnown RBP31.54■■■□□ 2.64
UBE2D3-220ENST00000505307 TSPY4P0CV99 314 aa31.54■■■□□ 2.64
UBE2D3-220ENST00000505307 TSPY10P0CW01 314 aa31.54■■■□□ 2.64
UBE2D3-220ENST00000505307 PTPRTO14522 1441 aa31.54■■■□□ 2.64
UBE2D3-220ENST00000505307 ARHGEF5Q12774 1597 aa31.52■■■□□ 2.64
UBE2D3-220ENST00000505307 PTPRKQ15262 1439 aa31.49■■■□□ 2.63
UBE2D3-220ENST00000505307 KIF3BO15066 747 aa31.48■■■□□ 2.63
UBE2D3-220ENST00000505307 KANK4Q5T7N3 995 aaPredicted RBP31.48■■■□□ 2.63
UBE2D3-220ENST00000505307 NCOA1Q15788 1441 aa31.48■■■□□ 2.63
UBE2D3-220ENST00000505307 MIA2Q96PC5 1412 aa31.46■■■□□ 2.63
UBE2D3-220ENST00000505307 FAM135AQ9P2D6 1515 aa31.45■■■□□ 2.63
UBE2D3-220ENST00000505307 MYOM3Q5VTT5 1437 aa31.42■■■□□ 2.62
UBE2D3-220ENST00000505307 APLP2Q06481 763 aa31.42■■■□□ 2.62
UBE2D3-220ENST00000505307 CAMSAP1Q5T5Y3 1602 aa31.41■■■□□ 2.62
UBE2D3-220ENST00000505307 ZNF142P52746 1687 aaPredicted RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms