RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.45
SKP2-203ENST00000504386 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
SKP2-203ENST00000504386 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
SKP2-203ENST00000504386 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
SKP2-203ENST00000504386 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
SKP2-203ENST00000504386 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
SKP2-203ENST00000504386 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
SKP2-203ENST00000504386 CCNB3Q8WWL7 1395 aa12.24□□□□□ -0.45
SKP2-203ENST00000504386 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
SKP2-203ENST00000504386 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
SKP2-203ENST00000504386 PLEKHH2Q8IVE3 1493 aa12.22□□□□□ -0.45
SKP2-203ENST00000504386 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.45
SKP2-203ENST00000504386 TIAM1Q13009 1591 aa12.21□□□□□ -0.46
SKP2-203ENST00000504386 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
SKP2-203ENST00000504386 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
SKP2-203ENST00000504386 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
SKP2-203ENST00000504386 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
SKP2-203ENST00000504386 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
SKP2-203ENST00000504386 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
SKP2-203ENST00000504386 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
SKP2-203ENST00000504386 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
SKP2-203ENST00000504386 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
SKP2-203ENST00000504386 ITSN2Q9NZM3 1697 aa12.17□□□□□ -0.46
SKP2-203ENST00000504386 LRRC9Q6ZRR7 1453 aa12.17□□□□□ -0.46
SKP2-203ENST00000504386 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
SKP2-203ENST00000504386 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
SKP2-203ENST00000504386 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.46
SKP2-203ENST00000504386 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
SKP2-203ENST00000504386 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
SKP2-203ENST00000504386 ABCC1P33527 1531 aa12.14□□□□□ -0.47
SKP2-203ENST00000504386 ZFYVE16Q7Z3T8 1539 aa12.14□□□□□ -0.47
SKP2-203ENST00000504386 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
SKP2-203ENST00000504386 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
SKP2-203ENST00000504386 ARHGEF40Q8TER5 1519 aa12.13□□□□□ -0.47
SKP2-203ENST00000504386 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
SKP2-203ENST00000504386 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
SKP2-203ENST00000504386 KDM5CP41229 1560 aa12.11□□□□□ -0.47
SKP2-203ENST00000504386 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
SKP2-203ENST00000504386 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
SKP2-203ENST00000504386 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
SKP2-203ENST00000504386 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
SKP2-203ENST00000504386 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
SKP2-203ENST00000504386 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
SKP2-203ENST00000504386 ATP10AO60312 1499 aa12.09□□□□□ -0.47
SKP2-203ENST00000504386 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
SKP2-203ENST00000504386 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
SKP2-203ENST00000504386 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
SKP2-203ENST00000504386 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
SKP2-203ENST00000504386 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
SKP2-203ENST00000504386 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
SKP2-203ENST00000504386 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
SKP2-203ENST00000504386 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
SKP2-203ENST00000504386 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
SKP2-203ENST00000504386 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
SKP2-203ENST00000504386 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
SKP2-203ENST00000504386 MBD5Q9P267 1494 aa12.02□□□□□ -0.48
SKP2-203ENST00000504386 ATP7AQ04656 1500 aa12.02□□□□□ -0.48
SKP2-203ENST00000504386 ARHGEF5Q12774 1597 aa12.02□□□□□ -0.49
SKP2-203ENST00000504386 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
SKP2-203ENST00000504386 AGLP35573 1532 aa12.01□□□□□ -0.49
SKP2-203ENST00000504386 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
SKP2-203ENST00000504386 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
SKP2-203ENST00000504386 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
SKP2-203ENST00000504386 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
SKP2-203ENST00000504386 BCORL1Q5H9F3 1711 aa11.99□□□□□ -0.49
SKP2-203ENST00000504386 A2MP01023 1474 aa11.98□□□□□ -0.49
SKP2-203ENST00000504386 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
SKP2-203ENST00000504386 ADAMTSL3P82987 1691 aa11.97□□□□□ -0.49
SKP2-203ENST00000504386 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
SKP2-203ENST00000504386 TCOF1Q13428 1488 aaKnown RBP11.97□□□□□ -0.49
SKP2-203ENST00000504386 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
SKP2-203ENST00000504386 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
SKP2-203ENST00000504386 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
SKP2-203ENST00000504386 PTPN23Q9H3S7 1636 aa11.96□□□□□ -0.5
SKP2-203ENST00000504386 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
SKP2-203ENST00000504386 MLECQ14165 292 aa11.95□□□□□ -0.5
SKP2-203ENST00000504386 MAST1Q9Y2H9 1570 aa11.95□□□□□ -0.5
SKP2-203ENST00000504386 PTPRMP28827 1452 aa11.95□□□□□ -0.5
SKP2-203ENST00000504386 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
SKP2-203ENST00000504386 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
SKP2-203ENST00000504386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
SKP2-203ENST00000504386 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
SKP2-203ENST00000504386 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
SKP2-203ENST00000504386 MADDQ8WXG6 1647 aa11.92□□□□□ -0.5
SKP2-203ENST00000504386 DAPK1P53355 1430 aa11.92□□□□□ -0.5
SKP2-203ENST00000504386 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
SKP2-203ENST00000504386 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
SKP2-203ENST00000504386 ABCC5O15440 1437 aa11.9□□□□□ -0.5
SKP2-203ENST00000504386 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
SKP2-203ENST00000504386 KIF3BO15066 747 aa11.89□□□□□ -0.51
SKP2-203ENST00000504386 GGT6Q6P531 493 aa11.89□□□□□ -0.51
SKP2-203ENST00000504386 KIF15Q9NS87 1388 aa11.89□□□□□ -0.51
SKP2-203ENST00000504386 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
SKP2-203ENST00000504386 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
SKP2-203ENST00000504386 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms