RNA–Protein interactions for RNA: ENST00000503463.5

CALCOCO2-206, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-206ENST00000503463 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
CALCOCO2-206ENST00000503463 SIGLEC1Q9BZZ2 1709 aa17.48■□□□□ 0.39
CALCOCO2-206ENST00000503463 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO2-206ENST00000503463 MAGI2Q86UL8 1455 aa17.47■□□□□ 0.39
CALCOCO2-206ENST00000503463 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
CALCOCO2-206ENST00000503463 SCAPERQ9BY12 1400 aa17.45■□□□□ 0.38
CALCOCO2-206ENST00000503463 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO2-206ENST00000503463 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
CALCOCO2-206ENST00000503463 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
CALCOCO2-206ENST00000503463 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
CALCOCO2-206ENST00000503463 PCF11O94913 1555 aaKnown RBP17.42■□□□□ 0.38
CALCOCO2-206ENST00000503463 CLIP1P30622 1438 aa17.42■□□□□ 0.38
CALCOCO2-206ENST00000503463 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
CALCOCO2-206ENST00000503463 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
CALCOCO2-206ENST00000503463 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
CALCOCO2-206ENST00000503463 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
CALCOCO2-206ENST00000503463 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.38
CALCOCO2-206ENST00000503463 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
CALCOCO2-206ENST00000503463 KDM5CP41229 1560 aa17.37■□□□□ 0.37
CALCOCO2-206ENST00000503463 ATP10AO60312 1499 aa17.37■□□□□ 0.37
CALCOCO2-206ENST00000503463 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
CALCOCO2-206ENST00000503463 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
CALCOCO2-206ENST00000503463 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
CALCOCO2-206ENST00000503463 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
CALCOCO2-206ENST00000503463 FYCO1Q9BQS8 1478 aa17.34■□□□□ 0.37
CALCOCO2-206ENST00000503463 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
CALCOCO2-206ENST00000503463 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
CALCOCO2-206ENST00000503463 ABCC1P33527 1531 aa17.31■□□□□ 0.36
CALCOCO2-206ENST00000503463 DIP2CQ9Y2E4 1556 aa17.31■□□□□ 0.36
CALCOCO2-206ENST00000503463 MLECQ14165 292 aa17.3■□□□□ 0.36
CALCOCO2-206ENST00000503463 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
CALCOCO2-206ENST00000503463 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
CALCOCO2-206ENST00000503463 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
CALCOCO2-206ENST00000503463 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
CALCOCO2-206ENST00000503463 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
CALCOCO2-206ENST00000503463 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
CALCOCO2-206ENST00000503463 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
CALCOCO2-206ENST00000503463 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
CALCOCO2-206ENST00000503463 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
CALCOCO2-206ENST00000503463 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
CALCOCO2-206ENST00000503463 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
CALCOCO2-206ENST00000503463 AGLP35573 1532 aa17.21■□□□□ 0.35
CALCOCO2-206ENST00000503463 C3P01024 1663 aa17.21■□□□□ 0.35
CALCOCO2-206ENST00000503463 HSPA2P54652 639 aa17.21■□□□□ 0.35
CALCOCO2-206ENST00000503463 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
CALCOCO2-206ENST00000503463 SYCP2Q9BX26 1530 aa17.19■□□□□ 0.34
CALCOCO2-206ENST00000503463 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
CALCOCO2-206ENST00000503463 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO2-206ENST00000503463 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO2-206ENST00000503463 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
CALCOCO2-206ENST00000503463 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
CALCOCO2-206ENST00000503463 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
CALCOCO2-206ENST00000503463 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
CALCOCO2-206ENST00000503463 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO2-206ENST00000503463 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
CALCOCO2-206ENST00000503463 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
CALCOCO2-206ENST00000503463 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
CALCOCO2-206ENST00000503463 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
CALCOCO2-206ENST00000503463 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
CALCOCO2-206ENST00000503463 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
CALCOCO2-206ENST00000503463 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
CALCOCO2-206ENST00000503463 CFDP1Q9UEE9 299 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO2-206ENST00000503463 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 CNTLNQ9NXG0 1405 aa17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
CALCOCO2-206ENST00000503463 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
CALCOCO2-206ENST00000503463 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
CALCOCO2-206ENST00000503463 A2MP01023 1474 aa17.05■□□□□ 0.32
CALCOCO2-206ENST00000503463 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
CALCOCO2-206ENST00000503463 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
CALCOCO2-206ENST00000503463 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
CALCOCO2-206ENST00000503463 NPATQ14207 1427 aa17.01■□□□□ 0.31
CALCOCO2-206ENST00000503463 ZNF644Q9H582 1327 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-206ENST00000503463 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO2-206ENST00000503463 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
CALCOCO2-206ENST00000503463 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
CALCOCO2-206ENST00000503463 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
CALCOCO2-206ENST00000503463 PTPRTO14522 1441 aa16.97■□□□□ 0.31
CALCOCO2-206ENST00000503463 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
CALCOCO2-206ENST00000503463 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
CALCOCO2-206ENST00000503463 CAMSAP1Q5T5Y3 1602 aa16.96■□□□□ 0.3
CALCOCO2-206ENST00000503463 NCOA1Q15788 1441 aa16.96■□□□□ 0.3
CALCOCO2-206ENST00000503463 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
CALCOCO2-206ENST00000503463 GGT6Q6P531 493 aa16.94■□□□□ 0.3
CALCOCO2-206ENST00000503463 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
CALCOCO2-206ENST00000503463 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
CALCOCO2-206ENST00000503463 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
CALCOCO2-206ENST00000503463 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
CALCOCO2-206ENST00000503463 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
CALCOCO2-206ENST00000503463 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO2-206ENST00000503463 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
CALCOCO2-206ENST00000503463 RSPH4AQ5TD94 716 aa16.9■□□□□ 0.3
CALCOCO2-206ENST00000503463 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
CALCOCO2-206ENST00000503463 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
CALCOCO2-206ENST00000503463 MAP3K1Q13233 1512 aa16.88■□□□□ 0.29
CALCOCO2-206ENST00000503463 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CALCOCO2-206ENST00000503463 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms