RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
SRPK1-206ENST00000502969 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
SRPK1-206ENST00000502969 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
SRPK1-206ENST00000502969 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
SRPK1-206ENST00000502969 COLQQ9Y215 455 aaPredicted RBP10.8□□□□□ -0.68
SRPK1-206ENST00000502969 E2F4Q16254 413 aa10.79□□□□□ -0.68
SRPK1-206ENST00000502969 MFSD10Q14728 455 aa10.78□□□□□ -0.68
SRPK1-206ENST00000502969 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
SRPK1-206ENST00000502969 TMEM121BQ9BXQ6 578 aaPredicted RBP10.78□□□□□ -0.68
SRPK1-206ENST00000502969 GPHNQ9NQX3 736 aaPredicted RBP10.77□□□□□ -0.69
SRPK1-206ENST00000502969 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
SRPK1-206ENST00000502969 KCNV2Q8TDN2 545 aa10.75□□□□□ -0.69
SRPK1-206ENST00000502969 ARHGEF1Q92888 912 aaKnown RBP10.73□□□□□ -0.69
SRPK1-206ENST00000502969 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
SRPK1-206ENST00000502969 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
SRPK1-206ENST00000502969 FOXK1P85037 733 aa10.69□□□□□ -0.7
SRPK1-206ENST00000502969 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.69□□□□□ -0.7
SRPK1-206ENST00000502969 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
SRPK1-206ENST00000502969 DSG2Q14126 1118 aa10.67□□□□□ -0.7
SRPK1-206ENST00000502969 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
SRPK1-206ENST00000502969 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
SRPK1-206ENST00000502969 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
SRPK1-206ENST00000502969 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
SRPK1-206ENST00000502969 KIF3CO14782 793 aa10.64□□□□□ -0.71
SRPK1-206ENST00000502969 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
SRPK1-206ENST00000502969 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
SRPK1-206ENST00000502969 SMYD5Q6GMV2 418 aa10.59□□□□□ -0.71
SRPK1-206ENST00000502969 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
SRPK1-206ENST00000502969 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
SRPK1-206ENST00000502969 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SRPK1-206ENST00000502969 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
SRPK1-206ENST00000502969 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
SRPK1-206ENST00000502969 DPYSL4O14531 572 aa10.55□□□□□ -0.72
SRPK1-206ENST00000502969 TBC1D12O60347 775 aa10.55□□□□□ -0.72
SRPK1-206ENST00000502969 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
SRPK1-206ENST00000502969 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
SRPK1-206ENST00000502969 SEMA3EO15041 775 aa10.51□□□□□ -0.73
SRPK1-206ENST00000502969 PDIA6Q15084 440 aa10.51□□□□□ -0.73
SRPK1-206ENST00000502969 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
SRPK1-206ENST00000502969 TESPA1A2RU30 521 aaPredicted RBP10.5□□□□□ -0.73
SRPK1-206ENST00000502969 SLAIN1Q8ND83 568 aa10.5□□□□□ -0.73
SRPK1-206ENST00000502969 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
SRPK1-206ENST00000502969 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
SRPK1-206ENST00000502969 OXER1Q8TDS5 423 aa10.48□□□□□ -0.73
SRPK1-206ENST00000502969 SLC34A2O95436 690 aa10.47□□□□□ -0.73
SRPK1-206ENST00000502969 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
SRPK1-206ENST00000502969 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
SRPK1-206ENST00000502969 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
SRPK1-206ENST00000502969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRPK1-206ENST00000502969 POTEMA6NI47 508 aa10.43□□□□□ -0.74
SRPK1-206ENST00000502969 SNPHO15079 494 aa10.42□□□□□ -0.74
SRPK1-206ENST00000502969 EVI5O60447 810 aa10.42□□□□□ -0.74
SRPK1-206ENST00000502969 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
SRPK1-206ENST00000502969 ZNF710Q8N1W2 664 aa10.41□□□□□ -0.74
SRPK1-206ENST00000502969 POTEGQ6S5H5 508 aa10.4□□□□□ -0.74
SRPK1-206ENST00000502969 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
SRPK1-206ENST00000502969 PCDHGA4Q9Y5G9 962 aa10.39□□□□□ -0.75
SRPK1-206ENST00000502969 GRXCR2A6NFK2 248 aa10.38□□□□□ -0.75
SRPK1-206ENST00000502969 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
SRPK1-206ENST00000502969 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
SRPK1-206ENST00000502969 PTGER2P43116 358 aa10.36□□□□□ -0.75
SRPK1-206ENST00000502969 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
SRPK1-206ENST00000502969 DDX12PQ92771 950 aa10.35□□□□□ -0.75
SRPK1-206ENST00000502969 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
SRPK1-206ENST00000502969 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
SRPK1-206ENST00000502969 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
SRPK1-206ENST00000502969 EPAS1Q99814 870 aa10.31□□□□□ -0.76
SRPK1-206ENST00000502969 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
SRPK1-206ENST00000502969 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
SRPK1-206ENST00000502969 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
SRPK1-206ENST00000502969 PHF14O94880 888 aa10.29□□□□□ -0.76
SRPK1-206ENST00000502969 ARSIQ5FYB1 569 aa10.29□□□□□ -0.76
SRPK1-206ENST00000502969 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
SRPK1-206ENST00000502969 NUDT7P0C024 238 aa10.28□□□□□ -0.76
SRPK1-206ENST00000502969 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
SRPK1-206ENST00000502969 JPH4Q96JJ6 628 aa10.27□□□□□ -0.77
SRPK1-206ENST00000502969 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
SRPK1-206ENST00000502969 OSBPP22059 807 aa10.26□□□□□ -0.77
SRPK1-206ENST00000502969 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
SRPK1-206ENST00000502969 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
SRPK1-206ENST00000502969 MAP3K7O43318 606 aa10.24□□□□□ -0.77
SRPK1-206ENST00000502969 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
SRPK1-206ENST00000502969 FCHSD2O94868 740 aa10.23□□□□□ -0.77
SRPK1-206ENST00000502969 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
SRPK1-206ENST00000502969 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
SRPK1-206ENST00000502969 ZMYND10O75800 440 aa10.22□□□□□ -0.77
SRPK1-206ENST00000502969 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
SRPK1-206ENST00000502969 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.774e-7■■■□□ 15
SRPK1-206ENST00000502969 HOXB1P14653 301 aaPredicted RBP10.21□□□□□ -0.77
SRPK1-206ENST00000502969 KRI1Q8N9T8 703 aaKnown RBP10.21□□□□□ -0.77
SRPK1-206ENST00000502969 RBM33Q96EV2 1170 aaKnown RBP10.21□□□□□ -0.77
SRPK1-206ENST00000502969 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
SRPK1-206ENST00000502969 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
SRPK1-206ENST00000502969 FOSBP53539 338 aa10.2□□□□□ -0.78
SRPK1-206ENST00000502969 ZDHHC16Q969W1 377 aa10.2□□□□□ -0.78
SRPK1-206ENST00000502969 HIC1Q14526 733 aa10.18□□□□□ -0.78
SRPK1-206ENST00000502969 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
SRPK1-206ENST00000502969 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
SRPK1-206ENST00000502969 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
SRPK1-206ENST00000502969 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms