RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-204ENST00000502448 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
NFXL1-204ENST00000502448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
NFXL1-204ENST00000502448 C3orf67Q6ZVT6 689 aa8.66□□□□□ -1.02
NFXL1-204ENST00000502448 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
NFXL1-204ENST00000502448 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
NFXL1-204ENST00000502448 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 MYT1Q01538 1121 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 P3H3Q8IVL6 736 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
NFXL1-204ENST00000502448 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 TMEM106CQ9BVX2 250 aa8.61□□□□□ -1.03
NFXL1-204ENST00000502448 RGS20O76081 388 aa8.61□□□□□ -1.03
NFXL1-204ENST00000502448 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
NFXL1-204ENST00000502448 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
NFXL1-204ENST00000502448 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
NFXL1-204ENST00000502448 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 HOXB3P14651 431 aaPredicted RBP8.56□□□□□ -1.04
NFXL1-204ENST00000502448 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
NFXL1-204ENST00000502448 ZBTB7CA1YPR0 619 aa8.54□□□□□ -1.04
NFXL1-204ENST00000502448 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
NFXL1-204ENST00000502448 Q6ZNB5 142 aa8.53□□□□□ -1.04
NFXL1-204ENST00000502448 ZNF710Q8N1W2 664 aa8.53□□□□□ -1.04
NFXL1-204ENST00000502448 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
NFXL1-204ENST00000502448 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
NFXL1-204ENST00000502448 RNF25Q96BH1 459 aaPredicted RBP8.5□□□□□ -1.05
NFXL1-204ENST00000502448 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
NFXL1-204ENST00000502448 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
NFXL1-204ENST00000502448 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
NFXL1-204ENST00000502448 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
NFXL1-204ENST00000502448 ARID3AQ99856 593 aa8.47□□□□□ -1.05
NFXL1-204ENST00000502448 PLCD3Q8N3E9 789 aa8.46□□□□□ -1.05
NFXL1-204ENST00000502448 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.05
NFXL1-204ENST00000502448 MIER1Q8N108 512 aa8.45□□□□□ -1.06
NFXL1-204ENST00000502448 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
NFXL1-204ENST00000502448 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
NFXL1-204ENST00000502448 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
NFXL1-204ENST00000502448 CCDC180Q9P1Z9 1646 aa8.4□□□□□ -1.06
NFXL1-204ENST00000502448 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
NFXL1-204ENST00000502448 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
NFXL1-204ENST00000502448 ZMYND10O75800 440 aa8.38□□□□□ -1.07
NFXL1-204ENST00000502448 ZBTB47Q9UFB7 747 aaPredicted RBP8.35□□□□□ -1.07
NFXL1-204ENST00000502448 APBB1O00213 710 aa8.35□□□□□ -1.07
NFXL1-204ENST00000502448 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
NFXL1-204ENST00000502448 IGSF3O75054 1194 aa8.35□□□□□ -1.07
NFXL1-204ENST00000502448 SHROOM4Q9ULL8 1493 aa8.34□□□□□ -1.07
NFXL1-204ENST00000502448 ARID3CA6NKF2 412 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 ABCC9O60706 1549 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 KCTD17Q8N5Z5 321 aa8.32□□□□□ -1.08
NFXL1-204ENST00000502448 STK25O00506 426 aa8.31□□□□□ -1.08
NFXL1-204ENST00000502448 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
NFXL1-204ENST00000502448 MKRN3Q13064 507 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
NFXL1-204ENST00000502448 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 TRAIPQ9BWF2 469 aa8.29□□□□□ -1.08
NFXL1-204ENST00000502448 LCE2BO14633 110 aa8.28□□□□□ -1.08
NFXL1-204ENST00000502448 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
NFXL1-204ENST00000502448 BARGINQ6ZT62 677 aa8.27□□□□□ -1.08
NFXL1-204ENST00000502448 CADPS2Q86UW7 1296 aa8.27□□□□□ -1.08
NFXL1-204ENST00000502448 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
NFXL1-204ENST00000502448 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
NFXL1-204ENST00000502448 A0A0G2JS52 829 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 RAD21O60216 631 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 GSE1Q14687 1217 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 IFFO2Q5TF58 517 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
NFXL1-204ENST00000502448 NUBP1P53384 320 aa8.25□□□□□ -1.09
NFXL1-204ENST00000502448 CCDC82Q8N4S0 544 aa8.25□□□□□ -1.09
NFXL1-204ENST00000502448 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
NFXL1-204ENST00000502448 TRAF7Q6Q0C0 670 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 FAM212AQ96EL1 285 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 AK7Q96M32 723 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 SEMA3EO15041 775 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 FLIIQ13045 1269 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 ZNF775Q96BV0 537 aaPredicted RBP8.21□□□□□ -1.1
NFXL1-204ENST00000502448 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
NFXL1-204ENST00000502448 A6NJR5 290 aa8.2□□□□□ -1.1
NFXL1-204ENST00000502448 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
NFXL1-204ENST00000502448 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
NFXL1-204ENST00000502448 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 DCAF8Q5TAQ9 597 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 PUS7Q96PZ0 661 aaKnown RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 STK24Q9Y6E0 443 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 TRAK2O60296 914 aa8.16□□□□□ -1.1
NFXL1-204ENST00000502448 TMCO4Q5TGY1 634 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms