RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
CLDND1-205ENST00000502288 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
CLDND1-205ENST00000502288 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
CLDND1-205ENST00000502288 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
CLDND1-205ENST00000502288 IQSEC2Q5JU85 1478 aa13.91□□□□□ -0.18
CLDND1-205ENST00000502288 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
CLDND1-205ENST00000502288 PTPRTO14522 1441 aa13.9□□□□□ -0.19
CLDND1-205ENST00000502288 ATP10AO60312 1499 aa13.88□□□□□ -0.19
CLDND1-205ENST00000502288 MLECQ14165 292 aa13.88□□□□□ -0.19
CLDND1-205ENST00000502288 LTBP4Q8N2S1 1624 aa13.87□□□□□ -0.19
CLDND1-205ENST00000502288 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
CLDND1-205ENST00000502288 UHRF1BP1Q6BDS2 1440 aa13.86□□□□□ -0.19
CLDND1-205ENST00000502288 PLCH2O75038 1416 aa13.83□□□□□ -0.2
CLDND1-205ENST00000502288 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CLDND1-205ENST00000502288 C3P01024 1663 aa13.83□□□□□ -0.2
CLDND1-205ENST00000502288 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
CLDND1-205ENST00000502288 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
CLDND1-205ENST00000502288 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
CLDND1-205ENST00000502288 KDM5CP41229 1560 aa13.77□□□□□ -0.21
CLDND1-205ENST00000502288 ZNF518AQ6AHZ1 1483 aa13.75□□□□□ -0.21
CLDND1-205ENST00000502288 NCOA1Q15788 1441 aa13.75□□□□□ -0.21
CLDND1-205ENST00000502288 TRAPPC8Q9Y2L5 1435 aa13.75□□□□□ -0.21
CLDND1-205ENST00000502288 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
CLDND1-205ENST00000502288 AGLP35573 1532 aa13.74□□□□□ -0.21
CLDND1-205ENST00000502288 DIP2CQ9Y2E4 1556 aa13.74□□□□□ -0.21
CLDND1-205ENST00000502288 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
CLDND1-205ENST00000502288 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
CLDND1-205ENST00000502288 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
CLDND1-205ENST00000502288 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
CLDND1-205ENST00000502288 ABCA6Q8N139 1617 aa13.7□□□□□ -0.22
CLDND1-205ENST00000502288 CAMSAP1Q5T5Y3 1602 aa13.69□□□□□ -0.22
CLDND1-205ENST00000502288 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
CLDND1-205ENST00000502288 AFAP1Q8N556 730 aa13.68□□□□□ -0.22
CLDND1-205ENST00000502288 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
CLDND1-205ENST00000502288 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
CLDND1-205ENST00000502288 NPATQ14207 1427 aa13.67□□□□□ -0.22
CLDND1-205ENST00000502288 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
CLDND1-205ENST00000502288 KIF14Q15058 1648 aa13.66□□□□□ -0.22
CLDND1-205ENST00000502288 UBAP1LF5GYI3 381 aa13.66□□□□□ -0.22
CLDND1-205ENST00000502288 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
CLDND1-205ENST00000502288 KIDINS220Q9ULH0 1771 aa13.65□□□□□ -0.22
CLDND1-205ENST00000502288 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
CLDND1-205ENST00000502288 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-205ENST00000502288 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
CLDND1-205ENST00000502288 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-205ENST00000502288 RANGAP1P46060 587 aaPredicted RBP13.63□□□□□ -0.23
CLDND1-205ENST00000502288 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
CLDND1-205ENST00000502288 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
CLDND1-205ENST00000502288 PKD2Q13563 968 aa13.62□□□□□ -0.23
CLDND1-205ENST00000502288 MYT1LQ9UL68 1186 aa13.62□□□□□ -0.23
CLDND1-205ENST00000502288 EEA1Q15075 1411 aa13.62□□□□□ -0.23
CLDND1-205ENST00000502288 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
CLDND1-205ENST00000502288 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
CLDND1-205ENST00000502288 PREX2Q70Z35 1606 aa13.6□□□□□ -0.23
CLDND1-205ENST00000502288 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
CLDND1-205ENST00000502288 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
CLDND1-205ENST00000502288 ABCC1P33527 1531 aa13.59□□□□□ -0.23
CLDND1-205ENST00000502288 FMN1Q68DA7 1419 aa13.59□□□□□ -0.23
CLDND1-205ENST00000502288 LRRIQ1Q96JM4 1722 aa13.59□□□□□ -0.23
CLDND1-205ENST00000502288 ZMYM3Q14202 1370 aa13.58□□□□□ -0.23
CLDND1-205ENST00000502288 CLIP1P30622 1438 aa13.57□□□□□ -0.24
CLDND1-205ENST00000502288 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
CLDND1-205ENST00000502288 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
CLDND1-205ENST00000502288 HSPA1LP34931 641 aa13.56□□□□□ -0.24
CLDND1-205ENST00000502288 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
CLDND1-205ENST00000502288 CPS1P31327 1500 aa13.54□□□□□ -0.24
CLDND1-205ENST00000502288 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
CLDND1-205ENST00000502288 TOM1O60784 492 aa13.54□□□□□ -0.24
CLDND1-205ENST00000502288 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
CLDND1-205ENST00000502288 PTPRKQ15262 1439 aa13.52□□□□□ -0.25
CLDND1-205ENST00000502288 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
CLDND1-205ENST00000502288 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
CLDND1-205ENST00000502288 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
CLDND1-205ENST00000502288 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
CLDND1-205ENST00000502288 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
CLDND1-205ENST00000502288 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
CLDND1-205ENST00000502288 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
CLDND1-205ENST00000502288 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
CLDND1-205ENST00000502288 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
CLDND1-205ENST00000502288 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
CLDND1-205ENST00000502288 ALKQ9UM73 1620 aa13.46□□□□□ -0.25
CLDND1-205ENST00000502288 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
CLDND1-205ENST00000502288 ADGBQ8N7X0 1667 aa13.46□□□□□ -0.26
CLDND1-205ENST00000502288 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-205ENST00000502288 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
CLDND1-205ENST00000502288 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
CLDND1-205ENST00000502288 A2MP01023 1474 aa13.44□□□□□ -0.26
CLDND1-205ENST00000502288 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
CLDND1-205ENST00000502288 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
CLDND1-205ENST00000502288 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
CLDND1-205ENST00000502288 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
CLDND1-205ENST00000502288 DEPDC5O75140 1603 aa13.41□□□□□ -0.26
CLDND1-205ENST00000502288 GGT6Q6P531 493 aa13.4□□□□□ -0.26
CLDND1-205ENST00000502288 MED14O60244 1454 aa13.4□□□□□ -0.26
CLDND1-205ENST00000502288 PLEKHH2Q8IVE3 1493 aa13.4□□□□□ -0.26
CLDND1-205ENST00000502288 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
CLDND1-205ENST00000502288 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
CLDND1-205ENST00000502288 STRCP1A6NGW2 1772 aa13.38□□□□□ -0.27
CLDND1-205ENST00000502288 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLDND1-205ENST00000502288 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms