RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 PLCH2O75038 1416 aa26.05■■□□□ 1.76
LRCH4-210ENST00000498539 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
LRCH4-210ENST00000498539 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
LRCH4-210ENST00000498539 SCAPERQ9BY12 1400 aa26.02■■□□□ 1.76
LRCH4-210ENST00000498539 TROQ12816 1431 aaPredicted RBP25.98■■□□□ 1.75
LRCH4-210ENST00000498539 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
LRCH4-210ENST00000498539 LMTK3Q96Q04 1460 aa25.98■■□□□ 1.75
LRCH4-210ENST00000498539 FER1L4A9Z1Z3 1794 aa25.97■■□□□ 1.75
LRCH4-210ENST00000498539 ARHGAP5Q13017 1502 aa25.94■■□□□ 1.74
LRCH4-210ENST00000498539 CDC42BPBQ9Y5S2 1711 aa25.93■■□□□ 1.74
LRCH4-210ENST00000498539 CLIP1P30622 1438 aa25.9■■□□□ 1.74
LRCH4-210ENST00000498539 PLPPR3Q6T4P5 718 aa25.9■■□□□ 1.74
LRCH4-210ENST00000498539 PREX2Q70Z35 1606 aa25.89■■□□□ 1.74
LRCH4-210ENST00000498539 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
LRCH4-210ENST00000498539 KDM5CP41229 1560 aa25.89■■□□□ 1.73
LRCH4-210ENST00000498539 MLECQ14165 292 aa25.88■■□□□ 1.73
LRCH4-210ENST00000498539 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
LRCH4-210ENST00000498539 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
LRCH4-210ENST00000498539 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
LRCH4-210ENST00000498539 ATP10AO60312 1499 aa25.86■■□□□ 1.73
LRCH4-210ENST00000498539 ARHGEF12Q9NZN5 1544 aa25.86■■□□□ 1.73
LRCH4-210ENST00000498539 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
LRCH4-210ENST00000498539 ZNF518AQ6AHZ1 1483 aa25.85■■□□□ 1.73
LRCH4-210ENST00000498539 DIP2CQ9Y2E4 1556 aa25.84■■□□□ 1.73
LRCH4-210ENST00000498539 CDC42BPAQ5VT25 1732 aa25.83■■□□□ 1.73
LRCH4-210ENST00000498539 ABCA6Q8N139 1617 aa25.83■■□□□ 1.73
LRCH4-210ENST00000498539 ITSN2Q9NZM3 1697 aa25.83■■□□□ 1.73
LRCH4-210ENST00000498539 ABCC1P33527 1531 aa25.83■■□□□ 1.72
LRCH4-210ENST00000498539 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
LRCH4-210ENST00000498539 HSPA2P54652 639 aa25.79■■□□□ 1.72
LRCH4-210ENST00000498539 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
LRCH4-210ENST00000498539 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
LRCH4-210ENST00000498539 REREQ9P2R6 1566 aa25.73■■□□□ 1.71
LRCH4-210ENST00000498539 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
LRCH4-210ENST00000498539 SAMD9LQ8IVG5 1584 aa25.71■■□□□ 1.71
LRCH4-210ENST00000498539 KIDINS220Q9ULH0 1771 aa25.71■■□□□ 1.71
LRCH4-210ENST00000498539 MLH3Q9UHC1 1453 aa25.7■■□□□ 1.7
LRCH4-210ENST00000498539 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
LRCH4-210ENST00000498539 CEBPAP49715 358 aaPredicted RBP25.67■■□□□ 1.7
LRCH4-210ENST00000498539 SYCP2Q9BX26 1530 aa25.67■■□□□ 1.7
LRCH4-210ENST00000498539 C3P01024 1663 aa25.65■■□□□ 1.7
LRCH4-210ENST00000498539 FBXO41Q8TF61 875 aa25.65■■□□□ 1.7
LRCH4-210ENST00000498539 AGLP35573 1532 aa25.63■■□□□ 1.69
LRCH4-210ENST00000498539 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
LRCH4-210ENST00000498539 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.69
LRCH4-210ENST00000498539 STRCQ7RTU9 1775 aa25.57■■□□□ 1.68
LRCH4-210ENST00000498539 INO80Q9ULG1 1556 aaPredicted RBP25.55■■□□□ 1.68
LRCH4-210ENST00000498539 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
LRCH4-210ENST00000498539 UHRF1BP1Q6BDS2 1440 aa25.53■■□□□ 1.68
LRCH4-210ENST00000498539 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
LRCH4-210ENST00000498539 TIAM1Q13009 1591 aa25.52■■□□□ 1.68
LRCH4-210ENST00000498539 HNRNPMP52272 730 aaKnown RBP eCLIP25.5■■□□□ 1.67
LRCH4-210ENST00000498539 PLXNC1O60486 1568 aa25.49■■□□□ 1.67
LRCH4-210ENST00000498539 EHBP1L1Q8N3D4 1523 aa25.49■■□□□ 1.67
LRCH4-210ENST00000498539 MTUS2Q5JR59 1369 aa25.49■■□□□ 1.67
LRCH4-210ENST00000498539 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
LRCH4-210ENST00000498539 SETD1BQ9UPS6 1966 aaKnown RBP25.49■■□□□ 1.67
LRCH4-210ENST00000498539 MROH2AA6NES4 1674 aa25.47■■□□□ 1.67
LRCH4-210ENST00000498539 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
LRCH4-210ENST00000498539 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
LRCH4-210ENST00000498539 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.66
LRCH4-210ENST00000498539 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
LRCH4-210ENST00000498539 CLTCQ00610 1675 aaKnown RBP25.45■■□□□ 1.66
LRCH4-210ENST00000498539 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
LRCH4-210ENST00000498539 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
LRCH4-210ENST00000498539 CERKQ8TCT0 537 aa25.41■■□□□ 1.66
LRCH4-210ENST00000498539 ESF1Q9H501 851 aaKnown RBP25.41■■□□□ 1.66
LRCH4-210ENST00000498539 A2MP01023 1474 aa25.4■■□□□ 1.66
LRCH4-210ENST00000498539 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
LRCH4-210ENST00000498539 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
LRCH4-210ENST00000498539 MBD5Q9P267 1494 aa25.36■■□□□ 1.65
LRCH4-210ENST00000498539 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
LRCH4-210ENST00000498539 NPATQ14207 1427 aa25.32■■□□□ 1.64
LRCH4-210ENST00000498539 NCOA1Q15788 1441 aa25.32■■□□□ 1.64
LRCH4-210ENST00000498539 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
LRCH4-210ENST00000498539 CAMSAP1Q5T5Y3 1602 aa25.31■■□□□ 1.64
LRCH4-210ENST00000498539 NCOA2Q15596 1464 aa25.31■■□□□ 1.64
LRCH4-210ENST00000498539 ZNF142P52746 1687 aaPredicted RBP25.31■■□□□ 1.64
LRCH4-210ENST00000498539 PTPRTO14522 1441 aa25.29■■□□□ 1.64
LRCH4-210ENST00000498539 CAMSAP2Q08AD1 1489 aa25.29■■□□□ 1.64
LRCH4-210ENST00000498539 DMRT2Q9Y5R5 561 aa25.26■■□□□ 1.63
LRCH4-210ENST00000498539 PTPRKQ15262 1439 aa25.26■■□□□ 1.63
LRCH4-210ENST00000498539 GGT6Q6P531 493 aa25.25■■□□□ 1.63
LRCH4-210ENST00000498539 CCDC141Q6ZP82 1450 aa25.25■■□□□ 1.63
LRCH4-210ENST00000498539 CEP170BQ9Y4F5 1589 aaPredicted RBP25.25■■□□□ 1.63
LRCH4-210ENST00000498539 LTBP4Q8N2S1 1624 aa25.25■■□□□ 1.63
LRCH4-210ENST00000498539 RTEL1-TNFRSF6BF6WH68 1400 aa25.22■■□□□ 1.63
LRCH4-210ENST00000498539 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
LRCH4-210ENST00000498539 ARHGEF5Q12774 1597 aa25.17■■□□□ 1.62
LRCH4-210ENST00000498539 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
LRCH4-210ENST00000498539 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
LRCH4-210ENST00000498539 NCKAP5LQ9HCH0 1330 aa25.15■■□□□ 1.62
LRCH4-210ENST00000498539 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
LRCH4-210ENST00000498539 KDM5DQ9BY66 1539 aa25.14■■□□□ 1.62
LRCH4-210ENST00000498539 PLA2R1Q13018 1463 aa25.14■■□□□ 1.61
LRCH4-210ENST00000498539 TCOF1Q13428 1488 aaKnown RBP25.12■■□□□ 1.61
LRCH4-210ENST00000498539 DNMT1P26358 1616 aaKnown RBP25.12■■□□□ 1.61
LRCH4-210ENST00000498539 KIF3BO15066 747 aa25.1■■□□□ 1.61
LRCH4-210ENST00000498539 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
LRCH4-210ENST00000498539 PZPP20742 1482 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms