RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TROQ12816 1431 aaPredicted RBP13.77□□□□□ -0.21
HMGXB4-207ENST00000498212 CCDC18Q5T9S5 1454 aa13.77□□□□□ -0.21
HMGXB4-207ENST00000498212 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
HMGXB4-207ENST00000498212 PLCH2O75038 1416 aa13.76□□□□□ -0.21
HMGXB4-207ENST00000498212 ARHGEF40Q8TER5 1519 aa13.74□□□□□ -0.21
HMGXB4-207ENST00000498212 CDC42BPBQ9Y5S2 1711 aa13.74□□□□□ -0.21
HMGXB4-207ENST00000498212 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
HMGXB4-207ENST00000498212 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
HMGXB4-207ENST00000498212 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
HMGXB4-207ENST00000498212 ARHGAP5Q13017 1502 aa13.71□□□□□ -0.21
HMGXB4-207ENST00000498212 CDC42BPAQ5VT25 1732 aa13.71□□□□□ -0.21
HMGXB4-207ENST00000498212 ADAMTSL3P82987 1691 aa13.71□□□□□ -0.21
HMGXB4-207ENST00000498212 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
HMGXB4-207ENST00000498212 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
HMGXB4-207ENST00000498212 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
HMGXB4-207ENST00000498212 POGZQ7Z3K3 1410 aa13.69□□□□□ -0.22
HMGXB4-207ENST00000498212 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
HMGXB4-207ENST00000498212 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
HMGXB4-207ENST00000498212 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
HMGXB4-207ENST00000498212 MADDQ8WXG6 1647 aa13.66□□□□□ -0.22
HMGXB4-207ENST00000498212 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
HMGXB4-207ENST00000498212 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
HMGXB4-207ENST00000498212 ZNF518AQ6AHZ1 1483 aa13.65□□□□□ -0.22
HMGXB4-207ENST00000498212 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
HMGXB4-207ENST00000498212 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
HMGXB4-207ENST00000498212 KDM5CP41229 1560 aa13.64□□□□□ -0.23
HMGXB4-207ENST00000498212 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
HMGXB4-207ENST00000498212 ABCC1P33527 1531 aa13.63□□□□□ -0.23
HMGXB4-207ENST00000498212 PTPRMP28827 1452 aa13.62□□□□□ -0.23
HMGXB4-207ENST00000498212 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
HMGXB4-207ENST00000498212 ATP10AO60312 1499 aa13.6□□□□□ -0.23
HMGXB4-207ENST00000498212 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
HMGXB4-207ENST00000498212 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
HMGXB4-207ENST00000498212 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
HMGXB4-207ENST00000498212 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
HMGXB4-207ENST00000498212 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.23
HMGXB4-207ENST00000498212 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
HMGXB4-207ENST00000498212 AFAP1Q8N556 730 aa13.58□□□□□ -0.24
HMGXB4-207ENST00000498212 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
HMGXB4-207ENST00000498212 GPATCH8Q9UKJ3 1502 aaKnown RBP13.58□□□□□ -0.24
HMGXB4-207ENST00000498212 LOC105371045A0A1W2PR82 267 aa13.57□□□□□ -0.24
HMGXB4-207ENST00000498212 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
HMGXB4-207ENST00000498212 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
HMGXB4-207ENST00000498212 SYCP2Q9BX26 1530 aa13.56□□□□□ -0.24
HMGXB4-207ENST00000498212 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
HMGXB4-207ENST00000498212 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
HMGXB4-207ENST00000498212 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
HMGXB4-207ENST00000498212 TIAM1Q13009 1591 aa13.55□□□□□ -0.24
HMGXB4-207ENST00000498212 REREQ9P2R6 1566 aa13.55□□□□□ -0.24
HMGXB4-207ENST00000498212 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
HMGXB4-207ENST00000498212 ZNF777Q9ULD5 760 aaPredicted RBP13.54□□□□□ -0.24
HMGXB4-207ENST00000498212 MLECQ14165 292 aa13.53□□□□□ -0.24
HMGXB4-207ENST00000498212 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.25
HMGXB4-207ENST00000498212 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
HMGXB4-207ENST00000498212 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
HMGXB4-207ENST00000498212 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
HMGXB4-207ENST00000498212 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
HMGXB4-207ENST00000498212 AGLP35573 1532 aa13.49□□□□□ -0.25
HMGXB4-207ENST00000498212 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
HMGXB4-207ENST00000498212 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMGXB4-207ENST00000498212 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
HMGXB4-207ENST00000498212 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
HMGXB4-207ENST00000498212 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
HMGXB4-207ENST00000498212 SPAG9O60271 1321 aaKnown RBP13.46□□□□□ -0.25
HMGXB4-207ENST00000498212 C3P01024 1663 aa13.46□□□□□ -0.26
HMGXB4-207ENST00000498212 PREX1Q8TCU6 1659 aa13.46□□□□□ -0.26
HMGXB4-207ENST00000498212 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
HMGXB4-207ENST00000498212 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
HMGXB4-207ENST00000498212 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
HMGXB4-207ENST00000498212 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
HMGXB4-207ENST00000498212 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
HMGXB4-207ENST00000498212 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
HMGXB4-207ENST00000498212 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
HMGXB4-207ENST00000498212 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
HMGXB4-207ENST00000498212 A2MP01023 1474 aa13.41□□□□□ -0.26
HMGXB4-207ENST00000498212 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
HMGXB4-207ENST00000498212 ESF1Q9H501 851 aaKnown RBP13.4□□□□□ -0.26
HMGXB4-207ENST00000498212 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
HMGXB4-207ENST00000498212 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
HMGXB4-207ENST00000498212 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
HMGXB4-207ENST00000498212 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
HMGXB4-207ENST00000498212 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
HMGXB4-207ENST00000498212 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
HMGXB4-207ENST00000498212 HSPA2P54652 639 aa13.36□□□□□ -0.27
HMGXB4-207ENST00000498212 RSPH4AQ5TD94 716 aa13.36□□□□□ -0.27
HMGXB4-207ENST00000498212 UHRF1BP1Q6BDS2 1440 aa13.35□□□□□ -0.27
HMGXB4-207ENST00000498212 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
HMGXB4-207ENST00000498212 APLP2Q06481 763 aa13.34□□□□□ -0.27
HMGXB4-207ENST00000498212 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
HMGXB4-207ENST00000498212 MIA2Q96PC5 1412 aa13.33□□□□□ -0.28
HMGXB4-207ENST00000498212 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
HMGXB4-207ENST00000498212 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
HMGXB4-207ENST00000498212 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
HMGXB4-207ENST00000498212 GGT6Q6P531 493 aa13.32□□□□□ -0.28
HMGXB4-207ENST00000498212 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
HMGXB4-207ENST00000498212 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
HMGXB4-207ENST00000498212 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
HMGXB4-207ENST00000498212 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
HMGXB4-207ENST00000498212 ZMYM3Q14202 1370 aa13.31□□□□□ -0.28
HMGXB4-207ENST00000498212 NPATQ14207 1427 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 321.4 ms