RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	ACIN1	Q9UKV3	1341 aa	Known RBP	11.98	□□□□□ -0.49
HM13-224	ENST00000498035	SECISBP2L	Q93073	1101 aa	Known RBP	11.98	□□□□□ -0.49
HM13-224	ENST00000498035	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.95	□□□□□ -0.5
HM13-224	ENST00000498035	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.94	□□□□□ -0.5
HM13-224	ENST00000498035	KANK4	Q5T7N3	995 aa	Predicted RBP	11.93	□□□□□ -0.5
HM13-224	ENST00000498035	AEBP1	Q8IUX7	1158 aa		11.93	□□□□□ -0.5
HM13-224	ENST00000498035	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.93	□□□□□ -0.5
HM13-224	ENST00000498035	KDM4A	O75164	1064 aa		11.92	□□□□□ -0.5
HM13-224	ENST00000498035	TDRD9	Q8NDG6	1382 aa	Known RBP	11.92	□□□□□ -0.5
HM13-224	ENST00000498035	OS9	Q13438	667 aa	Predicted RBP	11.91	□□□□□ -0.5
HM13-224	ENST00000498035	CHIC2	Q9UKJ5	165 aa		11.91	□□□□□ -0.5
HM13-224	ENST00000498035	PDS5B	Q9NTI5	1447 aa		11.91	□□□□□ -0.5
HM13-224	ENST00000498035	CNGB1	Q14028	1251 aa	Predicted RBP	11.9	□□□□□ -0.51
HM13-224	ENST00000498035	PATL2	C9JE40	543 aa	Known RBP	11.89	□□□□□ -0.51
HM13-224	ENST00000498035	TEX2	Q8IWB9	1127 aa		11.89	□□□□□ -0.51
HM13-224	ENST00000498035	SYNJ1	O43426	1573 aa		11.88	□□□□□ -0.51
HM13-224	ENST00000498035	FANCD2	Q9BXW9	1451 aa		11.88	□□□□□ -0.51
HM13-224	ENST00000498035	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.88	□□□□□ -0.51
HM13-224	ENST00000498035	BBX	Q8WY36	941 aa	Predicted RBP	11.88	□□□□□ -0.51
HM13-224	ENST00000498035	BRPF1	P55201	1214 aa	Predicted RBP	11.88	□□□□□ -0.51
HM13-224	ENST00000498035	FHAD1	B1AJZ9	1412 aa		11.88	□□□□□ -0.51
HM13-224	ENST00000498035	NPM1	P06748	294 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
HM13-224	ENST00000498035	CCNB3	Q8WWL7	1395 aa		11.86	□□□□□ -0.51
HM13-224	ENST00000498035	CCDC27	Q2M243	656 aa		11.86	□□□□□ -0.51
HM13-224	ENST00000498035	RTL5	Q5HYW3	569 aa	Predicted RBP	11.85	□□□□□ -0.51
HM13-224	ENST00000498035	IPO4	Q8TEX9	1081 aa	Known RBP	11.85	□□□□□ -0.51
HM13-224	ENST00000498035	CFTR	P13569	1480 aa		11.85	□□□□□ -0.51
HM13-224	ENST00000498035	ERCC6	Q03468	1493 aa		11.85	□□□□□ -0.51
HM13-224	ENST00000498035	TONSL	Q96HA7	1378 aa		11.84	□□□□□ -0.51
HM13-224	ENST00000498035	FAM9B	Q8IZU0	186 aa		11.83	□□□□□ -0.52
HM13-224	ENST00000498035	HMGXB3	Q12766	1538 aa		11.83	□□□□□ -0.52
HM13-224	ENST00000498035	APBB1	O00213	710 aa		11.83	□□□□□ -0.52
HM13-224	ENST00000498035	ANAPC15	P60006	121 aa		11.82	□□□□□ -0.52
HM13-224	ENST00000498035	IGF1R	P08069	1367 aa		11.82	□□□□□ -0.52
HM13-224	ENST00000498035	FGD5	Q6ZNL6	1462 aa		11.82	□□□□□ -0.52
HM13-224	ENST00000498035	RRP7BP	Q9NSQ0	103 aa		11.82	□□□□□ -0.52
HM13-224	ENST00000498035	NEUROD2	Q15784	382 aa		11.81	□□□□□ -0.52
HM13-224	ENST00000498035	KCNG1	Q9UIX4	513 aa		11.81	□□□□□ -0.52
HM13-224	ENST00000498035	ANP32C	O43423	234 aa		11.8	□□□□□ -0.52
HM13-224	ENST00000498035	FTSJ3	Q8IY81	847 aa	Known RBP	11.8	□□□□□ -0.52
HM13-224	ENST00000498035	GPATCH11	Q8N954	259 aa		11.78	□□□□□ -0.52
HM13-224	ENST00000498035	PTMA	P06454	111 aa	Known RBP	11.77	□□□□□ -0.52
HM13-224	ENST00000498035	RGS22	Q8NE09	1264 aa		11.77	□□□□□ -0.52
HM13-224	ENST00000498035	MIER1	Q8N108	512 aa		11.77	□□□□□ -0.53
HM13-224	ENST00000498035	RAD54L2	Q9Y4B4	1467 aa		11.77	□□□□□ -0.53
HM13-224	ENST00000498035	DDX10	Q13206	875 aa	Known RBP	11.77	□□□□□ -0.53
HM13-224	ENST00000498035	CC2D2B	Q6DHV5	1058 aa		11.77	□□□□□ -0.53
HM13-224	ENST00000498035	FHOD3	Q2V2M9	1422 aa		11.77	□□□□□ -0.53
HM13-224	ENST00000498035	PRDM2	Q13029	1718 aa		11.76	□□□□□ -0.53
HM13-224	ENST00000498035	TOP2B	Q02880	1626 aa		11.76	□□□□□ -0.53
HM13-224	ENST00000498035	CC2D2A	Q9P2K1	1620 aa		11.76	□□□□□ -0.53
HM13-224	ENST00000498035	FAM193A	P78312	1265 aa		11.75	□□□□□ -0.53
HM13-224	ENST00000498035	KIF21B	O75037	1637 aa		11.75	□□□□□ -0.53
HM13-224	ENST00000498035	CUX1	P39880	1505 aa		11.75	□□□□□ -0.53
HM13-224	ENST00000498035	PLEKHD1	A6NEE1	506 aa		11.74	□□□□□ -0.53
HM13-224	ENST00000498035	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.74	□□□□□ -0.53
HM13-224	ENST00000498035	SIN3A	Q96ST3	1273 aa		11.74	□□□□□ -0.53
HM13-224	ENST00000498035	FMN1	Q68DA7	1419 aa		11.73	□□□□□ -0.53
HM13-224	ENST00000498035	CANX	P27824	592 aa	Known RBP	11.73	□□□□□ -0.53
HM13-224	ENST00000498035	NES	P48681	1621 aa		11.73	□□□□□ -0.53
HM13-224	ENST00000498035	TSPY4	P0CV99	314 aa		11.73	□□□□□ -0.53
HM13-224	ENST00000498035	TSPY10	P0CW01	314 aa		11.73	□□□□□ -0.53
HM13-224	ENST00000498035	TMCO4	Q5TGY1	634 aa		11.72	□□□□□ -0.53
HM13-224	ENST00000498035	PRX	Q9BXM0	1461 aa		11.71	□□□□□ -0.53
HM13-224	ENST00000498035	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.71	□□□□□ -0.53
HM13-224	ENST00000498035	RNF216	Q9NWF9	866 aa	Predicted RBP	11.7	□□□□□ -0.54
HM13-224	ENST00000498035	MFAP1	P55081	439 aa	Known RBP	11.7	□□□□□ -0.54
HM13-224	ENST00000498035	ARHGAP35	Q9NRY4	1499 aa		11.7	□□□□□ -0.54
HM13-224	ENST00000498035	SET	Q01105	290 aa	Predicted RBP	11.69	□□□□□ -0.54
HM13-224	ENST00000498035	SPRYD3	Q8NCJ5	442 aa		11.68	□□□□□ -0.54
HM13-224	ENST00000498035	ERICH3	Q5RHP9	1530 aa		11.68	□□□□□ -0.54
HM13-224	ENST00000498035	SETD5	Q9C0A6	1442 aa		11.68	□□□□□ -0.54
HM13-224	ENST00000498035		E9PSI1	815 aa		11.68	□□□□□ -0.54
HM13-224	ENST00000498035	RAB3GAP2	Q9H2M9	1393 aa		11.68	□□□□□ -0.54
HM13-224	ENST00000498035	GAPVD1	Q14C86	1478 aa		11.67	□□□□□ -0.54
HM13-224	ENST00000498035	ARAP1	Q96P48	1450 aa		11.67	□□□□□ -0.54
HM13-224	ENST00000498035	CHRM1	P11229	460 aa	Predicted RBP	11.67	□□□□□ -0.54
HM13-224	ENST00000498035	DNAJC5B	Q9UF47	199 aa		11.67	□□□□□ -0.54
HM13-224	ENST00000498035	KCNH8	Q96L42	1107 aa		11.66	□□□□□ -0.54
HM13-224	ENST00000498035	NEFM	P07197	916 aa		11.66	□□□□□ -0.54
HM13-224	ENST00000498035	MCC	P23508	829 aa		11.66	□□□□□ -0.54
HM13-224	ENST00000498035	DNAJC2	Q99543	621 aa	Known RBP	11.65	□□□□□ -0.54
HM13-224	ENST00000498035	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.65	□□□□□ -0.54
HM13-224	ENST00000498035	GRIPAP1	Q4V328	841 aa		11.65	□□□□□ -0.54
HM13-224	ENST00000498035	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.65	□□□□□ -0.54
HM13-224	ENST00000498035	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
HM13-224	ENST00000498035	PKD2	Q13563	968 aa		11.65	□□□□□ -0.55
HM13-224	ENST00000498035	GZF1	Q9H116	711 aa	Predicted RBP	11.65	□□□□□ -0.55
HM13-224	ENST00000498035	TOPBP1	Q92547	1522 aa		11.63	□□□□□ -0.55
HM13-224	ENST00000498035	POLA1	P09884	1462 aa	Predicted RBP	11.62	□□□□□ -0.55
HM13-224	ENST00000498035	FOXD4L1	Q9NU39	408 aa		11.6	□□□□□ -0.55
HM13-224	ENST00000498035	PLCD3	Q8N3E9	789 aa		11.6	□□□□□ -0.55
HM13-224	ENST00000498035	DHX57	Q6P158	1386 aa	Known RBP	11.6	□□□□□ -0.55
HM13-224	ENST00000498035	SOX12	O15370	315 aa		11.6	□□□□□ -0.55
HM13-224	ENST00000498035	AQR	O60306	1485 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
HM13-224	ENST00000498035	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
HM13-224	ENST00000498035	CARMIL2	Q6F5E8	1435 aa		11.58	□□□□□ -0.56
HM13-224	ENST00000498035	JPH4	Q96JJ6	628 aa		11.58	□□□□□ -0.56
HM13-224	ENST00000498035	GTF2E1	P29083	439 aa	Predicted RBP	11.58	□□□□□ -0.56
HM13-224	ENST00000498035	NOL8	Q76FK4	1167 aa	Known RBP	11.57	□□□□□ -0.56

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