RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 PLCH2O75038 1416 aa29.59■■■□□ 2.33
ELL3-208ENST00000497700 FMN1Q68DA7 1419 aa29.59■■■□□ 2.33
ELL3-208ENST00000497700 MYO5CQ9NQX4 1742 aa29.59■■■□□ 2.33
ELL3-208ENST00000497700 LMTK3Q96Q04 1460 aa29.58■■■□□ 2.33
ELL3-208ENST00000497700 SCAPERQ9BY12 1400 aa29.58■■■□□ 2.33
ELL3-208ENST00000497700 POGZQ7Z3K3 1410 aa29.55■■■□□ 2.32
ELL3-208ENST00000497700 MLECQ14165 292 aa29.53■■■□□ 2.32
ELL3-208ENST00000497700 MAGI2Q86UL8 1455 aa29.5■■■□□ 2.31
ELL3-208ENST00000497700 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
ELL3-208ENST00000497700 TROQ12816 1431 aaPredicted RBP29.46■■■□□ 2.31
ELL3-208ENST00000497700 HSPA2P54652 639 aa29.46■■■□□ 2.31
ELL3-208ENST00000497700 EFCAB2Q5VUJ9 269 aa29.44■■■□□ 2.3
ELL3-208ENST00000497700 ARHGAP5Q13017 1502 aa29.44■■■□□ 2.3
ELL3-208ENST00000497700 CDK11AQ9UQ88 783 aaPredicted RBP29.43■■■□□ 2.3
ELL3-208ENST00000497700 ATP10AO60312 1499 aa29.41■■■□□ 2.3
ELL3-208ENST00000497700 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
ELL3-208ENST00000497700 C9orf84Q5VXU9 1444 aa29.38■■■□□ 2.29
ELL3-208ENST00000497700 CLIP1P30622 1438 aa29.37■■■□□ 2.29
ELL3-208ENST00000497700 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
ELL3-208ENST00000497700 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
ELL3-208ENST00000497700 AFAP1Q8N556 730 aa29.36■■■□□ 2.29
ELL3-208ENST00000497700 KDM5CP41229 1560 aa29.35■■■□□ 2.29
ELL3-208ENST00000497700 ZNF518AQ6AHZ1 1483 aa29.35■■■□□ 2.29
ELL3-208ENST00000497700 PREX2Q70Z35 1606 aa29.31■■■□□ 2.28
ELL3-208ENST00000497700 DIP2CQ9Y2E4 1556 aa29.3■■■□□ 2.28
ELL3-208ENST00000497700 CASKIN1Q8WXD9 1431 aa29.29■■■□□ 2.28
ELL3-208ENST00000497700 CEBPAP49715 358 aaPredicted RBP29.29■■■□□ 2.28
ELL3-208ENST00000497700 ABCA6Q8N139 1617 aa29.29■■■□□ 2.28
ELL3-208ENST00000497700 MYT1LQ9UL68 1186 aa29.28■■■□□ 2.28
ELL3-208ENST00000497700 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
ELL3-208ENST00000497700 CCDC18Q5T9S5 1454 aa29.26■■■□□ 2.27
ELL3-208ENST00000497700 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
ELL3-208ENST00000497700 ABCC1P33527 1531 aa29.25■■■□□ 2.27
ELL3-208ENST00000497700 TRAPPC8Q9Y2L5 1435 aa29.25■■■□□ 2.27
ELL3-208ENST00000497700 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
ELL3-208ENST00000497700 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
ELL3-208ENST00000497700 REREQ9P2R6 1566 aa29.18■■■□□ 2.26
ELL3-208ENST00000497700 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
ELL3-208ENST00000497700 KIDINS220Q9ULH0 1771 aa29.17■■■□□ 2.26
ELL3-208ENST00000497700 C3P01024 1663 aa29.14■■■□□ 2.26
ELL3-208ENST00000497700 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
ELL3-208ENST00000497700 STRCQ7RTU9 1775 aa29.11■■■□□ 2.25
ELL3-208ENST00000497700 ZNF777Q9ULD5 760 aaPredicted RBP29.1■■■□□ 2.25
ELL3-208ENST00000497700 AGLP35573 1532 aa29.09■■■□□ 2.25
ELL3-208ENST00000497700 SYCP2Q9BX26 1530 aa29.08■■■□□ 2.25
ELL3-208ENST00000497700 UHRF1BP1Q6BDS2 1440 aa29.06■■■□□ 2.24
ELL3-208ENST00000497700 SETD1BQ9UPS6 1966 aaKnown RBP29.06■■■□□ 2.24
ELL3-208ENST00000497700 GPATCH8Q9UKJ3 1502 aaKnown RBP29.05■■■□□ 2.24
ELL3-208ENST00000497700 CERKQ8TCT0 537 aa29.05■■■□□ 2.24
ELL3-208ENST00000497700 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
ELL3-208ENST00000497700 HNRNPMP52272 730 aaKnown RBP eCLIP29■■■□□ 2.23
ELL3-208ENST00000497700 ESF1Q9H501 851 aaKnown RBP28.98■■■□□ 2.23
ELL3-208ENST00000497700 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
ELL3-208ENST00000497700 ATP7AQ04656 1500 aa28.94■■■□□ 2.22
ELL3-208ENST00000497700 INO80Q9ULG1 1556 aaPredicted RBP28.93■■■□□ 2.22
ELL3-208ENST00000497700 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
ELL3-208ENST00000497700 CFDP1Q9UEE9 299 aaPredicted RBP28.91■■■□□ 2.22
ELL3-208ENST00000497700 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
ELL3-208ENST00000497700 CNTLNQ9NXG0 1405 aa28.89■■■□□ 2.22
ELL3-208ENST00000497700 MROH2AA6NES4 1674 aa28.89■■■□□ 2.21
ELL3-208ENST00000497700 CLTCQ00610 1675 aaKnown RBP28.88■■■□□ 2.21
ELL3-208ENST00000497700 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
ELL3-208ENST00000497700 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
ELL3-208ENST00000497700 KIAA1107Q9UPP5 1409 aa28.87■■■□□ 2.21
ELL3-208ENST00000497700 DMRT2Q9Y5R5 561 aa28.86■■■□□ 2.21
ELL3-208ENST00000497700 ZNF644Q9H582 1327 aaPredicted RBP28.86■■■□□ 2.21
ELL3-208ENST00000497700 PLEKHH2Q8IVE3 1493 aa28.85■■■□□ 2.21
ELL3-208ENST00000497700 A2MP01023 1474 aa28.84■■■□□ 2.21
ELL3-208ENST00000497700 ZMYM3Q14202 1370 aa28.82■■■□□ 2.2
ELL3-208ENST00000497700 EHBP1L1Q8N3D4 1523 aa28.82■■■□□ 2.2
ELL3-208ENST00000497700 PTPRTO14522 1441 aa28.81■■■□□ 2.2
ELL3-208ENST00000497700 NCOA1Q15788 1441 aa28.8■■■□□ 2.2
ELL3-208ENST00000497700 CAMSAP1Q5T5Y3 1602 aa28.79■■■□□ 2.2
ELL3-208ENST00000497700 NPATQ14207 1427 aa28.78■■■□□ 2.2
ELL3-208ENST00000497700 ADGBQ8N7X0 1667 aa28.78■■■□□ 2.2
ELL3-208ENST00000497700 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
ELL3-208ENST00000497700 GGT6Q6P531 493 aa28.76■■■□□ 2.19
ELL3-208ENST00000497700 MYO3AQ8NEV4 1616 aa28.76■■■□□ 2.19
ELL3-208ENST00000497700 MBD5Q9P267 1494 aa28.75■■■□□ 2.19
ELL3-208ENST00000497700 LTBP4Q8N2S1 1624 aa28.75■■■□□ 2.19
ELL3-208ENST00000497700 ZNF142P52746 1687 aaPredicted RBP28.71■■■□□ 2.19
ELL3-208ENST00000497700 PTPRKQ15262 1439 aa28.71■■■□□ 2.19
ELL3-208ENST00000497700 NCKAP5LQ9HCH0 1330 aa28.69■■■□□ 2.18
ELL3-208ENST00000497700 CEP170BQ9Y4F5 1589 aaPredicted RBP28.68■■■□□ 2.18
ELL3-208ENST00000497700 NCOA2Q15596 1464 aa28.66■■■□□ 2.18
ELL3-208ENST00000497700 CAMSAP2Q08AD1 1489 aa28.64■■■□□ 2.17
ELL3-208ENST00000497700 RTEL1-TNFRSF6BF6WH68 1400 aa28.61■■■□□ 2.17
ELL3-208ENST00000497700 CCDC141Q6ZP82 1450 aa28.6■■■□□ 2.17
ELL3-208ENST00000497700 ZNF335Q9H4Z2 1342 aaPredicted RBP28.59■■■□□ 2.17
ELL3-208ENST00000497700 DHX29Q7Z478 1369 aaKnown RBP28.59■■■□□ 2.17
ELL3-208ENST00000497700 PLA2R1Q13018 1463 aa28.58■■■□□ 2.17
ELL3-208ENST00000497700 TCOF1Q13428 1488 aaKnown RBP28.56■■■□□ 2.16
ELL3-208ENST00000497700 KIF3BO15066 747 aa28.55■■■□□ 2.16
ELL3-208ENST00000497700 DNMT1P26358 1616 aaKnown RBP28.54■■■□□ 2.16
ELL3-208ENST00000497700 DISP3Q9P2K9 1392 aa28.53■■■□□ 2.16
ELL3-208ENST00000497700 FBXO31Q5XUX0 539 aaPredicted RBP28.53■■■□□ 2.16
ELL3-208ENST00000497700 PPP6R1Q9UPN7 881 aa28.53■■■□□ 2.16
ELL3-208ENST00000497700 IQSEC2Q5JU85 1478 aa28.53■■■□□ 2.16
ELL3-208ENST00000497700 A2ML1A8K2U0 1454 aa28.52■■■□□ 2.16
ELL3-208ENST00000497700 KDM5DQ9BY66 1539 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms