RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PDE4AP27815 886 aa11.27□□□□□ -0.61
VPS36-206ENST00000497149 NBR1Q14596 966 aa11.26□□□□□ -0.61
VPS36-206ENST00000497149 POTEMA6NI47 508 aa11.25□□□□□ -0.61
VPS36-206ENST00000497149 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
VPS36-206ENST00000497149 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
VPS36-206ENST00000497149 CRISPLD2Q9H0B8 497 aa11.25□□□□□ -0.61
VPS36-206ENST00000497149 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
VPS36-206ENST00000497149 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
VPS36-206ENST00000497149 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
VPS36-206ENST00000497149 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
VPS36-206ENST00000497149 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
VPS36-206ENST00000497149 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
VPS36-206ENST00000497149 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
VPS36-206ENST00000497149 MFSD10Q14728 455 aa11.21□□□□□ -0.61
VPS36-206ENST00000497149 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
VPS36-206ENST00000497149 E2F4Q16254 413 aa11.2□□□□□ -0.62
VPS36-206ENST00000497149 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
VPS36-206ENST00000497149 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
VPS36-206ENST00000497149 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
VPS36-206ENST00000497149 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
VPS36-206ENST00000497149 G3V3G9 751 aa11.17□□□□□ -0.62
VPS36-206ENST00000497149 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
VPS36-206ENST00000497149 SNPHO15079 494 aa11.14□□□□□ -0.63
VPS36-206ENST00000497149 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
VPS36-206ENST00000497149 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
VPS36-206ENST00000497149 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
VPS36-206ENST00000497149 PPP1R15BQ5SWA1 713 aa11.11□□□□□ -0.63
VPS36-206ENST00000497149 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
VPS36-206ENST00000497149 DSG2Q14126 1118 aa11.09□□□□□ -0.63
VPS36-206ENST00000497149 FOXK1P85037 733 aa11.08□□□□□ -0.64
VPS36-206ENST00000497149 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
VPS36-206ENST00000497149 KIF3CO14782 793 aa11.07□□□□□ -0.64
VPS36-206ENST00000497149 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
VPS36-206ENST00000497149 ST18O60284 1047 aa11.06□□□□□ -0.64
VPS36-206ENST00000497149 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
VPS36-206ENST00000497149 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
VPS36-206ENST00000497149 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
VPS36-206ENST00000497149 PLPP6Q8IY26 295 aa11.03□□□□□ -0.64
VPS36-206ENST00000497149 SEMA3EO15041 775 aa11□□□□□ -0.65
VPS36-206ENST00000497149 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
VPS36-206ENST00000497149 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
VPS36-206ENST00000497149 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
VPS36-206ENST00000497149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS36-206ENST00000497149 DPYSL4O14531 572 aa10.94□□□□□ -0.66
VPS36-206ENST00000497149 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
VPS36-206ENST00000497149 CDAN1Q8IWY9 1227 aa10.92□□□□□ -0.66
VPS36-206ENST00000497149 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
VPS36-206ENST00000497149 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
VPS36-206ENST00000497149 MAP3K9P80192 1104 aa10.89□□□□□ -0.67
VPS36-206ENST00000497149 PDIA6Q15084 440 aa10.89□□□□□ -0.67
VPS36-206ENST00000497149 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
VPS36-206ENST00000497149 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
VPS36-206ENST00000497149 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
VPS36-206ENST00000497149 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS36-206ENST00000497149 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
VPS36-206ENST00000497149 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
VPS36-206ENST00000497149 SLC34A2O95436 690 aa10.84□□□□□ -0.67
VPS36-206ENST00000497149 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
VPS36-206ENST00000497149 EMP3P54852 163 aa10.83□□□□□ -0.68
VPS36-206ENST00000497149 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
VPS36-206ENST00000497149 TBC1D12O60347 775 aa10.82□□□□□ -0.68
VPS36-206ENST00000497149 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
VPS36-206ENST00000497149 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
VPS36-206ENST00000497149 RIMBP2O15034 1052 aa10.81□□□□□ -0.68
VPS36-206ENST00000497149 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
VPS36-206ENST00000497149 EVI5O60447 810 aa10.78□□□□□ -0.68
VPS36-206ENST00000497149 ZC3H15Q8WU90 426 aaKnown RBP10.78□□□□□ -0.68
VPS36-206ENST00000497149 PTGER2P43116 358 aa10.77□□□□□ -0.69
VPS36-206ENST00000497149 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
VPS36-206ENST00000497149 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
VPS36-206ENST00000497149 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
VPS36-206ENST00000497149 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
VPS36-206ENST00000497149 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
VPS36-206ENST00000497149 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
VPS36-206ENST00000497149 DDX12PQ92771 950 aa10.72□□□□□ -0.69
VPS36-206ENST00000497149 OSBPP22059 807 aa10.71□□□□□ -0.69
VPS36-206ENST00000497149 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
VPS36-206ENST00000497149 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
VPS36-206ENST00000497149 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
VPS36-206ENST00000497149 ZMYND10O75800 440 aa10.69□□□□□ -0.7
VPS36-206ENST00000497149 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
VPS36-206ENST00000497149 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
VPS36-206ENST00000497149 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
VPS36-206ENST00000497149 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
VPS36-206ENST00000497149 KRTAP3-3Q9BYR6 98 aa10.67□□□□□ -0.7
VPS36-206ENST00000497149 KRTAP3-2Q9BYR7 98 aa10.67□□□□□ -0.7
VPS36-206ENST00000497149 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
VPS36-206ENST00000497149 BARGINQ6ZT62 677 aa10.65□□□□□ -0.7
VPS36-206ENST00000497149 ERBB3P21860 1342 aa10.64□□□□□ -0.71
VPS36-206ENST00000497149 NUTM2FA1L443 756 aa10.63□□□□□ -0.71
VPS36-206ENST00000497149 PHF14O94880 888 aa10.63□□□□□ -0.71
VPS36-206ENST00000497149 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
VPS36-206ENST00000497149 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS36-206ENST00000497149 MMRN1Q13201 1228 aa10.62□□□□□ -0.71
VPS36-206ENST00000497149 EPAS1Q99814 870 aa10.62□□□□□ -0.71
VPS36-206ENST00000497149 SLC24A3Q9HC58 644 aa10.62□□□□□ -0.71
VPS36-206ENST00000497149 NUDT7P0C024 238 aa10.61□□□□□ -0.71
VPS36-206ENST00000497149 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
VPS36-206ENST00000497149 GPR37O15354 613 aa10.6□□□□□ -0.71
VPS36-206ENST00000497149 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms