RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
ITGA6-211ENST00000497107 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
ITGA6-211ENST00000497107 ERBB3P21860 1342 aa11.46□□□□□ -0.57
ITGA6-211ENST00000497107 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
ITGA6-211ENST00000497107 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
ITGA6-211ENST00000497107 G3V3G9 751 aa11.45□□□□□ -0.58
ITGA6-211ENST00000497107 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
ITGA6-211ENST00000497107 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
ITGA6-211ENST00000497107 SOX12O15370 315 aa11.42□□□□□ -0.58
ITGA6-211ENST00000497107 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
ITGA6-211ENST00000497107 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
ITGA6-211ENST00000497107 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
ITGA6-211ENST00000497107 TMEM92Q6UXU6 159 aa11.36□□□□□ -0.59
ITGA6-211ENST00000497107 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
ITGA6-211ENST00000497107 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
ITGA6-211ENST00000497107 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
ITGA6-211ENST00000497107 NLRP6P59044 892 aa11.34□□□□□ -0.59
ITGA6-211ENST00000497107 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
ITGA6-211ENST00000497107 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
ITGA6-211ENST00000497107 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
ITGA6-211ENST00000497107 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
ITGA6-211ENST00000497107 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
ITGA6-211ENST00000497107 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
ITGA6-211ENST00000497107 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
ITGA6-211ENST00000497107 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
ITGA6-211ENST00000497107 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-211ENST00000497107 PTGER2P43116 358 aa11.27□□□□□ -0.61
ITGA6-211ENST00000497107 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
ITGA6-211ENST00000497107 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
ITGA6-211ENST00000497107 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
ITGA6-211ENST00000497107 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
ITGA6-211ENST00000497107 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
ITGA6-211ENST00000497107 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
ITGA6-211ENST00000497107 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
ITGA6-211ENST00000497107 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
ITGA6-211ENST00000497107 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
ITGA6-211ENST00000497107 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
ITGA6-211ENST00000497107 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
ITGA6-211ENST00000497107 PPP1R37O75864 691 aa11.11□□□□□ -0.63
ITGA6-211ENST00000497107 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
ITGA6-211ENST00000497107 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
ITGA6-211ENST00000497107 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
ITGA6-211ENST00000497107 SHROOM4Q9ULL8 1493 aa11.05□□□□□ -0.64
ITGA6-211ENST00000497107 PBX2P40425 430 aa11.03□□□□□ -0.64
ITGA6-211ENST00000497107 PLCB2Q00722 1185 aa11.03□□□□□ -0.64
ITGA6-211ENST00000497107 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
ITGA6-211ENST00000497107 KIF3CO14782 793 aa11.01□□□□□ -0.65
ITGA6-211ENST00000497107 NUDT7P0C024 238 aa10.99□□□□□ -0.65
ITGA6-211ENST00000497107 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
ITGA6-211ENST00000497107 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
ITGA6-211ENST00000497107 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
ITGA6-211ENST00000497107 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
ITGA6-211ENST00000497107 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
ITGA6-211ENST00000497107 SLC34A2O95436 690 aa10.93□□□□□ -0.66
ITGA6-211ENST00000497107 PDE4AP27815 886 aa10.92□□□□□ -0.66
ITGA6-211ENST00000497107 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
ITGA6-211ENST00000497107 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
ITGA6-211ENST00000497107 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
ITGA6-211ENST00000497107 ADGRD1Q6QNK2 874 aa10.9□□□□□ -0.66
ITGA6-211ENST00000497107 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
ITGA6-211ENST00000497107 NCKAP5LQ9HCH0 1330 aa10.87□□□□□ -0.67
ITGA6-211ENST00000497107 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
ITGA6-211ENST00000497107 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
ITGA6-211ENST00000497107 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
ITGA6-211ENST00000497107 FOXK1P85037 733 aa10.86□□□□□ -0.67
ITGA6-211ENST00000497107 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
ITGA6-211ENST00000497107 HRO43593 1189 aa10.84□□□□□ -0.67
ITGA6-211ENST00000497107 MFSD10Q14728 455 aa10.84□□□□□ -0.67
ITGA6-211ENST00000497107 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
ITGA6-211ENST00000497107 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
ITGA6-211ENST00000497107 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
ITGA6-211ENST00000497107 TK2O00142 265 aa10.82□□□□□ -0.68
ITGA6-211ENST00000497107 DSG2Q14126 1118 aa10.82□□□□□ -0.68
ITGA6-211ENST00000497107 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
ITGA6-211ENST00000497107 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
ITGA6-211ENST00000497107 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
ITGA6-211ENST00000497107 DMRTA1Q5VZB9 504 aa10.8□□□□□ -0.68
ITGA6-211ENST00000497107 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
ITGA6-211ENST00000497107 ABCC9O60706 1549 aa10.79□□□□□ -0.68
ITGA6-211ENST00000497107 PSEN2P49810 448 aa10.77□□□□□ -0.69
ITGA6-211ENST00000497107 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
ITGA6-211ENST00000497107 NACADO15069 1562 aa10.74□□□□□ -0.69
ITGA6-211ENST00000497107 PTCD2Q8WV60 388 aaKnown RBP10.73□□□□□ -0.69
ITGA6-211ENST00000497107 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
ITGA6-211ENST00000497107 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
ITGA6-211ENST00000497107 TBC1D12O60347 775 aa10.7□□□□□ -0.7
ITGA6-211ENST00000497107 CAMK2BQ13554 666 aa10.7□□□□□ -0.7
ITGA6-211ENST00000497107 E2F4Q16254 413 aa10.69□□□□□ -0.7
ITGA6-211ENST00000497107 RGS20O76081 388 aa10.67□□□□□ -0.7
ITGA6-211ENST00000497107 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
ITGA6-211ENST00000497107 IFFO2Q5TF58 517 aa10.66□□□□□ -0.7
ITGA6-211ENST00000497107 SCRIBQ14160 1630 aa10.66□□□□□ -0.7
ITGA6-211ENST00000497107 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
ITGA6-211ENST00000497107 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
ITGA6-211ENST00000497107 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
ITGA6-211ENST00000497107 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
ITGA6-211ENST00000497107 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
ITGA6-211ENST00000497107 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
ITGA6-211ENST00000497107 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
ITGA6-211ENST00000497107 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms