RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 YEATS2Q9ULM3 1422 aa24.51■■□□□ 1.51
NEK4-206ENST00000496822 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
NEK4-206ENST00000496822 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
NEK4-206ENST00000496822 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
NEK4-206ENST00000496822 EFCAB2Q5VUJ9 269 aa24.48■■□□□ 1.51
NEK4-206ENST00000496822 HECW2Q9P2P5 1572 aa24.47■■□□□ 1.51
NEK4-206ENST00000496822 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
NEK4-206ENST00000496822 ARID4BQ4LE39 1312 aaPredicted RBP24.46■■□□□ 1.51
NEK4-206ENST00000496822 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.5
NEK4-206ENST00000496822 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
NEK4-206ENST00000496822 MADDQ8WXG6 1647 aa24.44■■□□□ 1.5
NEK4-206ENST00000496822 PTPRMP28827 1452 aa24.44■■□□□ 1.5
NEK4-206ENST00000496822 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
NEK4-206ENST00000496822 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
NEK4-206ENST00000496822 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
NEK4-206ENST00000496822 KDM5CP41229 1560 aa24.38■■□□□ 1.49
NEK4-206ENST00000496822 ABCC1P33527 1531 aa24.36■■□□□ 1.49
NEK4-206ENST00000496822 CDC42BPAQ5VT25 1732 aa24.36■■□□□ 1.49
NEK4-206ENST00000496822 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
NEK4-206ENST00000496822 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
NEK4-206ENST00000496822 RIMS1Q86UR5 1692 aaKnown RBP24.34■■□□□ 1.49
NEK4-206ENST00000496822 ATP10AO60312 1499 aa24.33■■□□□ 1.49
NEK4-206ENST00000496822 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
NEK4-206ENST00000496822 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
NEK4-206ENST00000496822 ITSN2Q9NZM3 1697 aa24.31■■□□□ 1.48
NEK4-206ENST00000496822 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
NEK4-206ENST00000496822 DIP2CQ9Y2E4 1556 aa24.29■■□□□ 1.48
NEK4-206ENST00000496822 MLECQ14165 292 aa24.28■■□□□ 1.48
NEK4-206ENST00000496822 SAMD9LQ8IVG5 1584 aa24.28■■□□□ 1.48
NEK4-206ENST00000496822 ABCA6Q8N139 1617 aa24.27■■□□□ 1.48
NEK4-206ENST00000496822 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
NEK4-206ENST00000496822 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
NEK4-206ENST00000496822 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
NEK4-206ENST00000496822 SYCP2Q9BX26 1530 aa24.24■■□□□ 1.47
NEK4-206ENST00000496822 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
NEK4-206ENST00000496822 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
NEK4-206ENST00000496822 FER1L4A9Z1Z3 1794 aa24.23■■□□□ 1.47
NEK4-206ENST00000496822 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
NEK4-206ENST00000496822 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
NEK4-206ENST00000496822 REREQ9P2R6 1566 aa24.2■■□□□ 1.47
NEK4-206ENST00000496822 TIAM1Q13009 1591 aa24.2■■□□□ 1.46
NEK4-206ENST00000496822 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
NEK4-206ENST00000496822 KIDINS220Q9ULH0 1771 aa24.19■■□□□ 1.46
NEK4-206ENST00000496822 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
NEK4-206ENST00000496822 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
NEK4-206ENST00000496822 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.46
NEK4-206ENST00000496822 KIAA1107Q9UPP5 1409 aa24.13■■□□□ 1.45
NEK4-206ENST00000496822 AGLP35573 1532 aa24.13■■□□□ 1.45
NEK4-206ENST00000496822 PLEKHH2Q8IVE3 1493 aa24.13■■□□□ 1.45
NEK4-206ENST00000496822 VPS8Q8N3P4 1428 aa24.12■■□□□ 1.45
NEK4-206ENST00000496822 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
NEK4-206ENST00000496822 INO80Q9ULG1 1556 aaPredicted RBP24.09■■□□□ 1.45
NEK4-206ENST00000496822 ATP7AQ04656 1500 aa24.09■■□□□ 1.45
NEK4-206ENST00000496822 SPAG9O60271 1321 aaKnown RBP24.09■■□□□ 1.45
NEK4-206ENST00000496822 NCOA2Q15596 1464 aa24.08■■□□□ 1.45
NEK4-206ENST00000496822 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
NEK4-206ENST00000496822 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
NEK4-206ENST00000496822 HSPA2P54652 639 aa24.04■■□□□ 1.44
NEK4-206ENST00000496822 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
NEK4-206ENST00000496822 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
NEK4-206ENST00000496822 LRRC9Q6ZRR7 1453 aa24.01■■□□□ 1.43
NEK4-206ENST00000496822 A2MP01023 1474 aa23.99■■□□□ 1.43
NEK4-206ENST00000496822 CAMSAP2Q08AD1 1489 aa23.99■■□□□ 1.43
NEK4-206ENST00000496822 C3P01024 1663 aa23.99■■□□□ 1.43
NEK4-206ENST00000496822 ILDR1Q86SU0 546 aaPredicted RBP23.98■■□□□ 1.43
NEK4-206ENST00000496822 PREX1Q8TCU6 1659 aa23.98■■□□□ 1.43
NEK4-206ENST00000496822 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
NEK4-206ENST00000496822 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
NEK4-206ENST00000496822 CCDC141Q6ZP82 1450 aa23.93■■□□□ 1.42
NEK4-206ENST00000496822 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
NEK4-206ENST00000496822 ADGBQ8N7X0 1667 aa23.92■■□□□ 1.42
NEK4-206ENST00000496822 ESF1Q9H501 851 aaKnown RBP23.92■■□□□ 1.42
NEK4-206ENST00000496822 RTEL1-TNFRSF6BF6WH68 1400 aa23.91■■□□□ 1.42
NEK4-206ENST00000496822 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
NEK4-206ENST00000496822 MROH2AA6NES4 1674 aa23.89■■□□□ 1.41
NEK4-206ENST00000496822 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
NEK4-206ENST00000496822 CLTCQ00610 1675 aaKnown RBP23.86■■□□□ 1.41
NEK4-206ENST00000496822 ZMYM3Q14202 1370 aa23.84■■□□□ 1.41
NEK4-206ENST00000496822 GGT6Q6P531 493 aa23.84■■□□□ 1.41
NEK4-206ENST00000496822 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
NEK4-206ENST00000496822 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.4
NEK4-206ENST00000496822 SETD1BQ9UPS6 1966 aaKnown RBP23.8■■□□□ 1.4
NEK4-206ENST00000496822 NPATQ14207 1427 aa23.8■■□□□ 1.4
NEK4-206ENST00000496822 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
NEK4-206ENST00000496822 STRCQ7RTU9 1775 aa23.79■■□□□ 1.4
NEK4-206ENST00000496822 MIA2Q96PC5 1412 aa23.78■■□□□ 1.4
NEK4-206ENST00000496822 PTPRKQ15262 1439 aa23.76■■□□□ 1.39
NEK4-206ENST00000496822 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
NEK4-206ENST00000496822 KIF3BO15066 747 aa23.74■■□□□ 1.39
NEK4-206ENST00000496822 TSPY4P0CV99 314 aa23.73■■□□□ 1.39
NEK4-206ENST00000496822 TSPY10P0CW01 314 aa23.73■■□□□ 1.39
NEK4-206ENST00000496822 MYO3AQ8NEV4 1616 aa23.73■■□□□ 1.39
NEK4-206ENST00000496822 APLP2Q06481 763 aa23.72■■□□□ 1.39
NEK4-206ENST00000496822 PPP6R1Q9UPN7 881 aa23.72■■□□□ 1.39
NEK4-206ENST00000496822 FBXO41Q8TF61 875 aa23.71■■□□□ 1.39
NEK4-206ENST00000496822 KDM5DQ9BY66 1539 aa23.7■■□□□ 1.38
NEK4-206ENST00000496822 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
NEK4-206ENST00000496822 ZNF142P52746 1687 aaPredicted RBP23.68■■□□□ 1.38
NEK4-206ENST00000496822 PTPN23Q9H3S7 1636 aa23.68■■□□□ 1.38
NEK4-206ENST00000496822 CAMSAP1Q5T5Y3 1602 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms