RNA–Protein interactions for RNA: ENST00000496749.1

NIN-215, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-215ENST00000496749 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
NIN-215ENST00000496749 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
NIN-215ENST00000496749 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
NIN-215ENST00000496749 POGZQ7Z3K3 1410 aa22.2■■□□□ 1.14
NIN-215ENST00000496749 ZMYM4Q5VZL5 1548 aa22.2■■□□□ 1.14
NIN-215ENST00000496749 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
NIN-215ENST00000496749 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
NIN-215ENST00000496749 ZNF518AQ6AHZ1 1483 aa22.16■■□□□ 1.14
NIN-215ENST00000496749 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
NIN-215ENST00000496749 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
NIN-215ENST00000496749 ADAMTSL3P82987 1691 aa22.13■■□□□ 1.13
NIN-215ENST00000496749 ILDR1Q86SU0 546 aaPredicted RBP22.11■■□□□ 1.13
NIN-215ENST00000496749 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
NIN-215ENST00000496749 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
NIN-215ENST00000496749 PTPRMP28827 1452 aa22.09■■□□□ 1.13
NIN-215ENST00000496749 YEATS2Q9ULM3 1422 aa22.08■■□□□ 1.13
NIN-215ENST00000496749 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.13
NIN-215ENST00000496749 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
NIN-215ENST00000496749 CDC42BPAQ5VT25 1732 aa22.07■■□□□ 1.12
NIN-215ENST00000496749 ATP10AO60312 1499 aa22.07■■□□□ 1.12
NIN-215ENST00000496749 AFAP1Q8N556 730 aa22.06■■□□□ 1.12
NIN-215ENST00000496749 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
NIN-215ENST00000496749 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
NIN-215ENST00000496749 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
NIN-215ENST00000496749 ABCC1P33527 1531 aa22.04■■□□□ 1.12
NIN-215ENST00000496749 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
NIN-215ENST00000496749 KDM5CP41229 1560 aa22.04■■□□□ 1.12
NIN-215ENST00000496749 MADDQ8WXG6 1647 aa22.03■■□□□ 1.12
NIN-215ENST00000496749 MLECQ14165 292 aa22.02■■□□□ 1.12
NIN-215ENST00000496749 PLEKHH2Q8IVE3 1493 aa22.02■■□□□ 1.12
NIN-215ENST00000496749 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
NIN-215ENST00000496749 GPATCH8Q9UKJ3 1502 aaKnown RBP22.01■■□□□ 1.11
NIN-215ENST00000496749 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
NIN-215ENST00000496749 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
NIN-215ENST00000496749 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
NIN-215ENST00000496749 TRAPPC8Q9Y2L5 1435 aa21.96■■□□□ 1.11
NIN-215ENST00000496749 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
NIN-215ENST00000496749 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.1
NIN-215ENST00000496749 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
NIN-215ENST00000496749 KIAA1107Q9UPP5 1409 aa21.94■■□□□ 1.1
NIN-215ENST00000496749 SYCP2Q9BX26 1530 aa21.94■■□□□ 1.1
NIN-215ENST00000496749 FER1L4A9Z1Z3 1794 aa21.94■■□□□ 1.1
NIN-215ENST00000496749 SPAG9O60271 1321 aaKnown RBP21.93■■□□□ 1.1
NIN-215ENST00000496749 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
NIN-215ENST00000496749 ARHGEF12Q9NZN5 1544 aa21.93■■□□□ 1.1
NIN-215ENST00000496749 DIP2CQ9Y2E4 1556 aa21.93■■□□□ 1.1
NIN-215ENST00000496749 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
NIN-215ENST00000496749 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
NIN-215ENST00000496749 APLP2Q06481 763 aa21.92■■□□□ 1.1
NIN-215ENST00000496749 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
NIN-215ENST00000496749 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
NIN-215ENST00000496749 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
NIN-215ENST00000496749 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.1
NIN-215ENST00000496749 KIDINS220Q9ULH0 1771 aa21.87■■□□□ 1.09
NIN-215ENST00000496749 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
NIN-215ENST00000496749 AGLP35573 1532 aa21.85■■□□□ 1.09
NIN-215ENST00000496749 ATP7AQ04656 1500 aa21.84■■□□□ 1.09
NIN-215ENST00000496749 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
NIN-215ENST00000496749 LRRC9Q6ZRR7 1453 aa21.82■■□□□ 1.08
NIN-215ENST00000496749 RSPH4AQ5TD94 716 aa21.81■■□□□ 1.08
NIN-215ENST00000496749 ZNF644Q9H582 1327 aaPredicted RBP21.79■■□□□ 1.08
NIN-215ENST00000496749 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
NIN-215ENST00000496749 CNTLNQ9NXG0 1405 aa21.78■■□□□ 1.08
NIN-215ENST00000496749 FBXO41Q8TF61 875 aa21.77■■□□□ 1.08
NIN-215ENST00000496749 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.07
NIN-215ENST00000496749 A2MP01023 1474 aa21.76■■□□□ 1.07
NIN-215ENST00000496749 TSPY4P0CV99 314 aa21.75■■□□□ 1.07
NIN-215ENST00000496749 TSPY10P0CW01 314 aa21.75■■□□□ 1.07
NIN-215ENST00000496749 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
NIN-215ENST00000496749 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
NIN-215ENST00000496749 RTEL1-TNFRSF6BF6WH68 1400 aa21.74■■□□□ 1.07
NIN-215ENST00000496749 MBD5Q9P267 1494 aa21.73■■□□□ 1.07
NIN-215ENST00000496749 CEBPAP49715 358 aaPredicted RBP21.73■■□□□ 1.07
NIN-215ENST00000496749 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
NIN-215ENST00000496749 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
NIN-215ENST00000496749 KANK4Q5T7N3 995 aaPredicted RBP21.69■■□□□ 1.06
NIN-215ENST00000496749 GGT6Q6P531 493 aa21.69■■□□□ 1.06
NIN-215ENST00000496749 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
NIN-215ENST00000496749 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
NIN-215ENST00000496749 HSPA2P54652 639 aa21.68■■□□□ 1.06
NIN-215ENST00000496749 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
NIN-215ENST00000496749 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
NIN-215ENST00000496749 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
NIN-215ENST00000496749 C3P01024 1663 aa21.67■■□□□ 1.06
NIN-215ENST00000496749 ARHGEF5Q12774 1597 aa21.67■■□□□ 1.06
NIN-215ENST00000496749 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
NIN-215ENST00000496749 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
NIN-215ENST00000496749 KIF3BO15066 747 aa21.61■■□□□ 1.05
NIN-215ENST00000496749 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
NIN-215ENST00000496749 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
NIN-215ENST00000496749 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
NIN-215ENST00000496749 NPATQ14207 1427 aa21.6■■□□□ 1.05
NIN-215ENST00000496749 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
NIN-215ENST00000496749 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
NIN-215ENST00000496749 WASHC2CQ9Y4E1 1318 aa21.54■■□□□ 1.04
NIN-215ENST00000496749 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
NIN-215ENST00000496749 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
NIN-215ENST00000496749 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
NIN-215ENST00000496749 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
NIN-215ENST00000496749 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms