RNA–Protein interactions for RNA: ENST00000496749.1

NIN-215, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-215ENST00000496749 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
NIN-215ENST00000496749 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
NIN-215ENST00000496749 ABCC9O60706 1549 aa30.04■■■□□ 2.4
NIN-215ENST00000496749 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
NIN-215ENST00000496749 NACADO15069 1562 aa28.67■■■□□ 2.18
NIN-215ENST00000496749 DCAF8L2P0C7V8 631 aa28.66■■■□□ 2.18
NIN-215ENST00000496749 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
NIN-215ENST00000496749 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
NIN-215ENST00000496749 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
NIN-215ENST00000496749 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
NIN-215ENST00000496749 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
NIN-215ENST00000496749 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
NIN-215ENST00000496749 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
NIN-215ENST00000496749 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
NIN-215ENST00000496749 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
NIN-215ENST00000496749 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
NIN-215ENST00000496749 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
NIN-215ENST00000496749 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
NIN-215ENST00000496749 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
NIN-215ENST00000496749 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
NIN-215ENST00000496749 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
NIN-215ENST00000496749 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
NIN-215ENST00000496749 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
NIN-215ENST00000496749 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
NIN-215ENST00000496749 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
NIN-215ENST00000496749 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
NIN-215ENST00000496749 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
NIN-215ENST00000496749 ERCC6Q03468 1493 aa26.02■■□□□ 1.76
NIN-215ENST00000496749 CUX2O14529 1486 aa26.01■■□□□ 1.75
NIN-215ENST00000496749 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
NIN-215ENST00000496749 WIZO95785 1651 aa25.85■■□□□ 1.73
NIN-215ENST00000496749 NESP48681 1621 aa25.82■■□□□ 1.72
NIN-215ENST00000496749 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
NIN-215ENST00000496749 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
NIN-215ENST00000496749 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
NIN-215ENST00000496749 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
NIN-215ENST00000496749 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
NIN-215ENST00000496749 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
NIN-215ENST00000496749 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
NIN-215ENST00000496749 CFTRP13569 1480 aa25.4■■□□□ 1.66
NIN-215ENST00000496749 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
NIN-215ENST00000496749 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
NIN-215ENST00000496749 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
NIN-215ENST00000496749 WDR62O43379 1518 aa25.28■■□□□ 1.64
NIN-215ENST00000496749 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
NIN-215ENST00000496749 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
NIN-215ENST00000496749 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
NIN-215ENST00000496749 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
NIN-215ENST00000496749 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
NIN-215ENST00000496749 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
NIN-215ENST00000496749 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
NIN-215ENST00000496749 IFT140Q96RY7 1462 aa24.86■■□□□ 1.57
NIN-215ENST00000496749 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
NIN-215ENST00000496749 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
NIN-215ENST00000496749 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
NIN-215ENST00000496749 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
NIN-215ENST00000496749 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
NIN-215ENST00000496749 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
NIN-215ENST00000496749 SOGA1O94964 1423 aa24.6■■□□□ 1.53
NIN-215ENST00000496749 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
NIN-215ENST00000496749 AQRO60306 1485 aaKnown RBP eCLIP24.54■■□□□ 1.52
NIN-215ENST00000496749 CUX1P39880 1505 aa24.54■■□□□ 1.52
NIN-215ENST00000496749 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
NIN-215ENST00000496749 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
NIN-215ENST00000496749 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
NIN-215ENST00000496749 FBLN2P98095 1184 aa24.45■■□□□ 1.5
NIN-215ENST00000496749 RIMBP3CA6NJZ7 1639 aa24.44■■□□□ 1.5
NIN-215ENST00000496749 RIMBP3BA6NNM3 1639 aa24.44■■□□□ 1.5
NIN-215ENST00000496749 RIMBP3Q9UFD9 1639 aa24.44■■□□□ 1.5
NIN-215ENST00000496749 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
NIN-215ENST00000496749 CHD1O14646 1710 aa24.38■■□□□ 1.49
NIN-215ENST00000496749 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
NIN-215ENST00000496749 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
NIN-215ENST00000496749 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
NIN-215ENST00000496749 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
NIN-215ENST00000496749 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
NIN-215ENST00000496749 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
NIN-215ENST00000496749 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
NIN-215ENST00000496749 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
NIN-215ENST00000496749 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
NIN-215ENST00000496749 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
NIN-215ENST00000496749 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
NIN-215ENST00000496749 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
NIN-215ENST00000496749 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
NIN-215ENST00000496749 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
NIN-215ENST00000496749 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
NIN-215ENST00000496749 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
NIN-215ENST00000496749 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
NIN-215ENST00000496749 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
NIN-215ENST00000496749 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
NIN-215ENST00000496749 GRIN2AQ12879 1464 aa24.01■■□□□ 1.43
NIN-215ENST00000496749 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
NIN-215ENST00000496749 NUP160Q12769 1436 aa23.88■■□□□ 1.41
NIN-215ENST00000496749 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
NIN-215ENST00000496749 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
NIN-215ENST00000496749 CUL7Q14999 1698 aa23.79■■□□□ 1.4
NIN-215ENST00000496749 IGF1RP08069 1367 aa23.75■■□□□ 1.39
NIN-215ENST00000496749 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
NIN-215ENST00000496749 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
NIN-215ENST00000496749 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms