RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 CDC42BPBQ9Y5S2 1711 aa27.68■■■□□ 2.02
CTNS-207ENST00000495445 POGZQ7Z3K3 1410 aa27.67■■■□□ 2.02
CTNS-207ENST00000495445 ARHGAP5Q13017 1502 aa27.67■■■□□ 2.02
CTNS-207ENST00000495445 MAGI2Q86UL8 1455 aa27.66■■■□□ 2.02
CTNS-207ENST00000495445 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
CTNS-207ENST00000495445 ARHGEF40Q8TER5 1519 aa27.62■■■□□ 2.01
CTNS-207ENST00000495445 GPATCH8Q9UKJ3 1502 aaKnown RBP27.61■■■□□ 2.01
CTNS-207ENST00000495445 YEATS2Q9ULM3 1422 aa27.6■■■□□ 2.01
CTNS-207ENST00000495445 MTUS2Q5JR59 1369 aa27.6■■■□□ 2.01
CTNS-207ENST00000495445 CDC42BPAQ5VT25 1732 aa27.59■■■□□ 2.01
CTNS-207ENST00000495445 AFAP1Q8N556 730 aa27.59■■■□□ 2.01
CTNS-207ENST00000495445 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
CTNS-207ENST00000495445 ZFYVE16Q7Z3T8 1539 aa27.57■■■□□ 2
CTNS-207ENST00000495445 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
CTNS-207ENST00000495445 ARHGEF12Q9NZN5 1544 aa27.55■■■□□ 2
CTNS-207ENST00000495445 KDM5CP41229 1560 aa27.54■■■□□ 2
CTNS-207ENST00000495445 ADAMTSL3P82987 1691 aa27.54■■■□□ 2
CTNS-207ENST00000495445 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
CTNS-207ENST00000495445 ABCC1P33527 1531 aa27.51■■■□□ 2
CTNS-207ENST00000495445 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
CTNS-207ENST00000495445 BCORL1Q5H9F3 1711 aa27.51■■□□□ 1.99
CTNS-207ENST00000495445 ATP10AO60312 1499 aa27.51■■□□□ 1.99
CTNS-207ENST00000495445 CCNB3Q8WWL7 1395 aa27.5■■□□□ 1.99
CTNS-207ENST00000495445 EHBP1L1Q8N3D4 1523 aa27.5■■□□□ 1.99
CTNS-207ENST00000495445 CFDP1Q9UEE9 299 aaPredicted RBP27.48■■□□□ 1.99
CTNS-207ENST00000495445 MLH3Q9UHC1 1453 aa27.48■■□□□ 1.99
CTNS-207ENST00000495445 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
CTNS-207ENST00000495445 ZNF777Q9ULD5 760 aaPredicted RBP27.46■■□□□ 1.99
CTNS-207ENST00000495445 SAMD9LQ8IVG5 1584 aa27.45■■□□□ 1.99
CTNS-207ENST00000495445 KIAA1107Q9UPP5 1409 aa27.45■■□□□ 1.98
CTNS-207ENST00000495445 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
CTNS-207ENST00000495445 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
CTNS-207ENST00000495445 C9orf84Q5VXU9 1444 aa27.43■■□□□ 1.98
CTNS-207ENST00000495445 PTPRMP28827 1452 aa27.43■■□□□ 1.98
CTNS-207ENST00000495445 HNRNPMP52272 730 aaKnown RBP eCLIP27.42■■□□□ 1.98
CTNS-207ENST00000495445 HECW2Q9P2P5 1572 aa27.41■■□□□ 1.98
CTNS-207ENST00000495445 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
CTNS-207ENST00000495445 PLEKHH2Q8IVE3 1493 aa27.39■■□□□ 1.98
CTNS-207ENST00000495445 MADDQ8WXG6 1647 aa27.38■■□□□ 1.97
CTNS-207ENST00000495445 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
CTNS-207ENST00000495445 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
CTNS-207ENST00000495445 DIP2CQ9Y2E4 1556 aa27.37■■□□□ 1.97
CTNS-207ENST00000495445 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
CTNS-207ENST00000495445 SYCP2Q9BX26 1530 aa27.36■■□□□ 1.97
CTNS-207ENST00000495445 MYT1LQ9UL68 1186 aa27.36■■□□□ 1.97
CTNS-207ENST00000495445 REREQ9P2R6 1566 aa27.35■■□□□ 1.97
CTNS-207ENST00000495445 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
CTNS-207ENST00000495445 KIDINS220Q9ULH0 1771 aa27.35■■□□□ 1.97
CTNS-207ENST00000495445 SUPT6HQ7KZ85 1726 aaKnown RBP27.34■■□□□ 1.97
CTNS-207ENST00000495445 ABCA6Q8N139 1617 aa27.33■■□□□ 1.97
CTNS-207ENST00000495445 MLECQ14165 292 aa27.32■■□□□ 1.96
CTNS-207ENST00000495445 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
CTNS-207ENST00000495445 MBD5Q9P267 1494 aa27.32■■□□□ 1.96
CTNS-207ENST00000495445 AGLP35573 1532 aa27.28■■□□□ 1.96
CTNS-207ENST00000495445 RIMS1Q86UR5 1692 aaKnown RBP27.27■■□□□ 1.96
CTNS-207ENST00000495445 RSPH4AQ5TD94 716 aa27.23■■□□□ 1.95
CTNS-207ENST00000495445 ATP7AQ04656 1500 aa27.21■■□□□ 1.95
CTNS-207ENST00000495445 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
CTNS-207ENST00000495445 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.94
CTNS-207ENST00000495445 FER1L4A9Z1Z3 1794 aa27.2■■□□□ 1.94
CTNS-207ENST00000495445 CAMSAP2Q08AD1 1489 aa27.19■■□□□ 1.94
CTNS-207ENST00000495445 APLP2Q06481 763 aa27.18■■□□□ 1.94
CTNS-207ENST00000495445 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
CTNS-207ENST00000495445 A2MP01023 1474 aa27.13■■□□□ 1.93
CTNS-207ENST00000495445 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
CTNS-207ENST00000495445 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
CTNS-207ENST00000495445 CCDC141Q6ZP82 1450 aa27.13■■□□□ 1.93
CTNS-207ENST00000495445 ARHGEF5Q12774 1597 aa27.11■■□□□ 1.93
CTNS-207ENST00000495445 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
CTNS-207ENST00000495445 LMTK3Q96Q04 1460 aa27.1■■□□□ 1.93
CTNS-207ENST00000495445 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
CTNS-207ENST00000495445 DHX29Q7Z478 1369 aaKnown RBP27.08■■□□□ 1.93
CTNS-207ENST00000495445 ADGBQ8N7X0 1667 aa27.07■■□□□ 1.92
CTNS-207ENST00000495445 TSPY4P0CV99 314 aa27.06■■□□□ 1.92
CTNS-207ENST00000495445 TSPY10P0CW01 314 aa27.06■■□□□ 1.92
CTNS-207ENST00000495445 ESF1Q9H501 851 aaKnown RBP27.04■■□□□ 1.92
CTNS-207ENST00000495445 PPP6R1Q9UPN7 881 aa27.04■■□□□ 1.92
CTNS-207ENST00000495445 CNTLNQ9NXG0 1405 aa27.04■■□□□ 1.92
CTNS-207ENST00000495445 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
CTNS-207ENST00000495445 GGT6Q6P531 493 aa26.99■■□□□ 1.91
CTNS-207ENST00000495445 C3P01024 1663 aa26.98■■□□□ 1.91
CTNS-207ENST00000495445 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
CTNS-207ENST00000495445 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
CTNS-207ENST00000495445 HSPA2P54652 639 aa26.95■■□□□ 1.9
CTNS-207ENST00000495445 FGD6Q6ZV73 1430 aa26.94■■□□□ 1.9
CTNS-207ENST00000495445 MROH2AA6NES4 1674 aa26.94■■□□□ 1.9
CTNS-207ENST00000495445 KIF3BO15066 747 aa26.93■■□□□ 1.9
CTNS-207ENST00000495445 TCOF1Q13428 1488 aaKnown RBP26.93■■□□□ 1.9
CTNS-207ENST00000495445 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
CTNS-207ENST00000495445 PREX1Q8TCU6 1659 aa26.91■■□□□ 1.9
CTNS-207ENST00000495445 ABCC5O15440 1437 aa26.9■■□□□ 1.9
CTNS-207ENST00000495445 NPATQ14207 1427 aa26.89■■□□□ 1.89
CTNS-207ENST00000495445 CLTCQ00610 1675 aaKnown RBP26.87■■□□□ 1.89
CTNS-207ENST00000495445 UHRF1BP1Q6BDS2 1440 aa26.87■■□□□ 1.89
CTNS-207ENST00000495445 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
CTNS-207ENST00000495445 DAPK1P53355 1430 aa26.83■■□□□ 1.89
CTNS-207ENST00000495445 PTPRKQ15262 1439 aa26.83■■□□□ 1.89
CTNS-207ENST00000495445 FAM135AQ9P2D6 1515 aa26.81■■□□□ 1.88
CTNS-207ENST00000495445 DNMT1P26358 1616 aaKnown RBP26.81■■□□□ 1.88
CTNS-207ENST00000495445 WASHC2CQ9Y4E1 1318 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms