RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CDC42BPAQ5VT25 1732 aa27.14■■□□□ 1.94
SNX17-209ENST00000494893 GPATCH8Q9UKJ3 1502 aaKnown RBP27.14■■□□□ 1.94
SNX17-209ENST00000494893 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
SNX17-209ENST00000494893 MAP3K1Q13233 1512 aa27.13■■□□□ 1.93
SNX17-209ENST00000494893 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
SNX17-209ENST00000494893 RICTORQ6R327 1708 aa27.11■■□□□ 1.93
SNX17-209ENST00000494893 SCAPERQ9BY12 1400 aa27.11■■□□□ 1.93
SNX17-209ENST00000494893 LRRC9Q6ZRR7 1453 aa27.1■■□□□ 1.93
SNX17-209ENST00000494893 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
SNX17-209ENST00000494893 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
SNX17-209ENST00000494893 CCNB3Q8WWL7 1395 aa27.06■■□□□ 1.92
SNX17-209ENST00000494893 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
SNX17-209ENST00000494893 ARHGEF12Q9NZN5 1544 aa27.05■■□□□ 1.92
SNX17-209ENST00000494893 ABCC1P33527 1531 aa27.03■■□□□ 1.92
SNX17-209ENST00000494893 ZMYM4Q5VZL5 1548 aa27.03■■□□□ 1.92
SNX17-209ENST00000494893 SAMD9LQ8IVG5 1584 aa27.02■■□□□ 1.92
SNX17-209ENST00000494893 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
SNX17-209ENST00000494893 TRAPPC8Q9Y2L5 1435 aa26.98■■□□□ 1.91
SNX17-209ENST00000494893 CFDP1Q9UEE9 299 aaPredicted RBP26.97■■□□□ 1.91
SNX17-209ENST00000494893 AFAP1Q8N556 730 aa26.96■■□□□ 1.91
SNX17-209ENST00000494893 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
SNX17-209ENST00000494893 YEATS2Q9ULM3 1422 aa26.96■■□□□ 1.91
SNX17-209ENST00000494893 KDM5CP41229 1560 aa26.96■■□□□ 1.91
SNX17-209ENST00000494893 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.91
SNX17-209ENST00000494893 ITSN2Q9NZM3 1697 aa26.95■■□□□ 1.91
SNX17-209ENST00000494893 ZNF518AQ6AHZ1 1483 aa26.94■■□□□ 1.9
SNX17-209ENST00000494893 KDM4FA0A1W2PPD8 638 aa26.94■■□□□ 1.9
SNX17-209ENST00000494893 ZNF644Q9H582 1327 aaPredicted RBP26.93■■□□□ 1.9
SNX17-209ENST00000494893 SYCP2Q9BX26 1530 aa26.93■■□□□ 1.9
SNX17-209ENST00000494893 MAGI2Q86UL8 1455 aa26.92■■□□□ 1.9
SNX17-209ENST00000494893 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
SNX17-209ENST00000494893 APLP2Q06481 763 aa26.9■■□□□ 1.9
SNX17-209ENST00000494893 KIAA1107Q9UPP5 1409 aa26.9■■□□□ 1.9
SNX17-209ENST00000494893 HNRNPMP52272 730 aaKnown RBP eCLIP26.89■■□□□ 1.9
SNX17-209ENST00000494893 PLEKHH2Q8IVE3 1493 aa26.87■■□□□ 1.89
SNX17-209ENST00000494893 MBD5Q9P267 1494 aa26.85■■□□□ 1.89
SNX17-209ENST00000494893 MLH3Q9UHC1 1453 aa26.85■■□□□ 1.89
SNX17-209ENST00000494893 SIGLEC1Q9BZZ2 1709 aa26.85■■□□□ 1.89
SNX17-209ENST00000494893 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
SNX17-209ENST00000494893 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
SNX17-209ENST00000494893 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
SNX17-209ENST00000494893 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
SNX17-209ENST00000494893 ATP10AO60312 1499 aa26.79■■□□□ 1.88
SNX17-209ENST00000494893 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
SNX17-209ENST00000494893 KIDINS220Q9ULH0 1771 aa26.79■■□□□ 1.88
SNX17-209ENST00000494893 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
SNX17-209ENST00000494893 C9orf84Q5VXU9 1444 aa26.75■■□□□ 1.87
SNX17-209ENST00000494893 INO80Q9ULG1 1556 aaPredicted RBP26.74■■□□□ 1.87
SNX17-209ENST00000494893 SPAG9O60271 1321 aaKnown RBP26.73■■□□□ 1.87
SNX17-209ENST00000494893 BCORL1Q5H9F3 1711 aa26.72■■□□□ 1.87
SNX17-209ENST00000494893 ARID4BQ4LE39 1312 aaPredicted RBP26.71■■□□□ 1.87
SNX17-209ENST00000494893 ATP7AQ04656 1500 aa26.71■■□□□ 1.87
SNX17-209ENST00000494893 ADAMTSL3P82987 1691 aa26.71■■□□□ 1.87
SNX17-209ENST00000494893 MYT1LQ9UL68 1186 aa26.71■■□□□ 1.87
SNX17-209ENST00000494893 CCDC141Q6ZP82 1450 aa26.7■■□□□ 1.87
SNX17-209ENST00000494893 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
SNX17-209ENST00000494893 ARHGEF5Q12774 1597 aa26.7■■□□□ 1.86
SNX17-209ENST00000494893 REREQ9P2R6 1566 aa26.7■■□□□ 1.86
SNX17-209ENST00000494893 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
SNX17-209ENST00000494893 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
SNX17-209ENST00000494893 TCOF1Q13428 1488 aaKnown RBP26.64■■□□□ 1.86
SNX17-209ENST00000494893 RTEL1-TNFRSF6BF6WH68 1400 aa26.64■■□□□ 1.85
SNX17-209ENST00000494893 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
SNX17-209ENST00000494893 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
SNX17-209ENST00000494893 AGLP35573 1532 aa26.62■■□□□ 1.85
SNX17-209ENST00000494893 RSPH4AQ5TD94 716 aa26.62■■□□□ 1.85
SNX17-209ENST00000494893 MLECQ14165 292 aa26.6■■□□□ 1.85
SNX17-209ENST00000494893 PLXNC1O60486 1568 aa26.59■■□□□ 1.85
SNX17-209ENST00000494893 A2MP01023 1474 aa26.57■■□□□ 1.84
SNX17-209ENST00000494893 MAST1Q9Y2H9 1570 aa26.56■■□□□ 1.84
SNX17-209ENST00000494893 ABCC5O15440 1437 aa26.56■■□□□ 1.84
SNX17-209ENST00000494893 PTPRMP28827 1452 aa26.55■■□□□ 1.84
SNX17-209ENST00000494893 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
SNX17-209ENST00000494893 TSPY4P0CV99 314 aa26.52■■□□□ 1.84
SNX17-209ENST00000494893 TSPY10P0CW01 314 aa26.52■■□□□ 1.84
SNX17-209ENST00000494893 RIMS1Q86UR5 1692 aaKnown RBP26.52■■□□□ 1.84
SNX17-209ENST00000494893 DNMT1P26358 1616 aaKnown RBP26.51■■□□□ 1.83
SNX17-209ENST00000494893 DAPK1P53355 1430 aa26.5■■□□□ 1.83
SNX17-209ENST00000494893 DHX29Q7Z478 1369 aaKnown RBP26.5■■□□□ 1.83
SNX17-209ENST00000494893 CROCC2H7BZ55 1655 aa26.49■■□□□ 1.83
SNX17-209ENST00000494893 FER1L4A9Z1Z3 1794 aa26.48■■□□□ 1.83
SNX17-209ENST00000494893 SHANK2Q9UPX8 1470 aa26.48■■□□□ 1.83
SNX17-209ENST00000494893 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
SNX17-209ENST00000494893 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
SNX17-209ENST00000494893 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
SNX17-209ENST00000494893 KIF15Q9NS87 1388 aa26.35■■□□□ 1.81
SNX17-209ENST00000494893 KIF3BO15066 747 aa26.35■■□□□ 1.81
SNX17-209ENST00000494893 CEBPAP49715 358 aaPredicted RBP26.35■■□□□ 1.81
SNX17-209ENST00000494893 GGT6Q6P531 493 aa26.35■■□□□ 1.81
SNX17-209ENST00000494893 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
SNX17-209ENST00000494893 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
SNX17-209ENST00000494893 NCOA1Q15788 1441 aa26.33■■□□□ 1.81
SNX17-209ENST00000494893 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.81
SNX17-209ENST00000494893 PLPPR3Q6T4P5 718 aa26.33■■□□□ 1.81
SNX17-209ENST00000494893 RRP7BPQ9NSQ0 103 aa26.33■■□□□ 1.81
SNX17-209ENST00000494893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.8
SNX17-209ENST00000494893 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
SNX17-209ENST00000494893 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
SNX17-209ENST00000494893 EIF2AK4Q9P2K8 1649 aaKnown RBP26.29■■□□□ 1.8
SNX17-209ENST00000494893 C3P01024 1663 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms