RNA–Protein interactions for RNA: ENST00000494736.1

CCT6A-209, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 2

Gene CCT6A, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-209ENST00000494736 KIF3CO14782 793 aa15.15■□□□□ 0.02
CCT6A-209ENST00000494736 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
CCT6A-209ENST00000494736 C2orf72A6NCS6 295 aa15.14■□□□□ 0.01
CCT6A-209ENST00000494736 POTEMA6NI47 508 aa15.13■□□□□ 0.01
CCT6A-209ENST00000494736 POTEGQ6S5H5 508 aa15.13■□□□□ 0.01
CCT6A-209ENST00000494736 TMC2Q8TDI7 906 aa15.07■□□□□ 0
CCT6A-209ENST00000494736 DOK7Q18PE1 504 aa15.06■□□□□ 0
CCT6A-209ENST00000494736 MARVELD3Q96A59 401 aa15.02■□□□□ -0
CCT6A-209ENST00000494736 ZNF710Q8N1W2 664 aa15□□□□□ -0.01
CCT6A-209ENST00000494736 GPHNQ9NQX3 736 aaPredicted RBP15□□□□□ -0.01
CCT6A-209ENST00000494736 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
CCT6A-209ENST00000494736 CRISPLD2Q9H0B8 497 aa14.97□□□□□ -0.01
CCT6A-209ENST00000494736 RIMBP2O15034 1052 aa14.96□□□□□ -0.01
CCT6A-209ENST00000494736 HOXB1P14653 301 aaPredicted RBP14.96□□□□□ -0.01
CCT6A-209ENST00000494736 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
CCT6A-209ENST00000494736 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
CCT6A-209ENST00000494736 FOXK1P85037 733 aa14.95□□□□□ -0.02
CCT6A-209ENST00000494736 DSG2Q14126 1118 aa14.95□□□□□ -0.02
CCT6A-209ENST00000494736 ZSWIM6Q9HCJ5 1215 aa14.94□□□□□ -0.02
CCT6A-209ENST00000494736 EMP3P54852 163 aa14.93□□□□□ -0.02
CCT6A-209ENST00000494736 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
CCT6A-209ENST00000494736 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
CCT6A-209ENST00000494736 PLPP6Q8IY26 295 aa14.92□□□□□ -0.02
CCT6A-209ENST00000494736 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
CCT6A-209ENST00000494736 SLC34A2O95436 690 aa14.89□□□□□ -0.03
CCT6A-209ENST00000494736 ARSIQ5FYB1 569 aa14.89□□□□□ -0.03
CCT6A-209ENST00000494736 PDE4AP27815 886 aa14.88□□□□□ -0.03
CCT6A-209ENST00000494736 CFAP44Q96MT7 982 aa14.88□□□□□ -0.03
CCT6A-209ENST00000494736 KHSRPQ92945 711 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCT6A-209ENST00000494736 POTEB3A0JP26 581 aa14.86□□□□□ -0.03
CCT6A-209ENST00000494736 POTEBQ6S5H4 581 aa14.86□□□□□ -0.03
CCT6A-209ENST00000494736 FAM205CA6NFA0 338 aa14.84□□□□□ -0.03
CCT6A-209ENST00000494736 LARP6Q9BRS8 491 aaKnown RBP14.84□□□□□ -0.03
CCT6A-209ENST00000494736 PPP1R15BQ5SWA1 713 aa14.83□□□□□ -0.04
CCT6A-209ENST00000494736 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
CCT6A-209ENST00000494736 PCDHGA4Q9Y5G9 962 aa14.83□□□□□ -0.04
CCT6A-209ENST00000494736 HS3ST6Q96QI5 342 aa14.82□□□□□ -0.04
CCT6A-209ENST00000494736 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
CCT6A-209ENST00000494736 MFSD10Q14728 455 aa14.8□□□□□ -0.04
CCT6A-209ENST00000494736 PTCD2Q8WV60 388 aaKnown RBP14.8□□□□□ -0.04
CCT6A-209ENST00000494736 ERBB3P21860 1342 aa14.78□□□□□ -0.04
CCT6A-209ENST00000494736 DDX27Q96GQ7 796 aaKnown RBP14.78□□□□□ -0.04
CCT6A-209ENST00000494736 NUDT7P0C024 238 aa14.77□□□□□ -0.05
CCT6A-209ENST00000494736 VARS2Q5ST30 1063 aaKnown RBP14.73□□□□□ -0.05
CCT6A-209ENST00000494736 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
CCT6A-209ENST00000494736 OXER1Q8TDS5 423 aa14.72□□□□□ -0.05
CCT6A-209ENST00000494736 ZNF316A6NFI3 1004 aaPredicted RBP14.71□□□□□ -0.05
CCT6A-209ENST00000494736 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCT6A-209ENST00000494736 LHX6Q9UPM6 363 aa14.68□□□□□ -0.06
CCT6A-209ENST00000494736 TBC1D12O60347 775 aa14.66□□□□□ -0.06
CCT6A-209ENST00000494736 KRTAP3-3Q9BYR6 98 aa14.65□□□□□ -0.06
CCT6A-209ENST00000494736 KRTAP3-2Q9BYR7 98 aa14.65□□□□□ -0.06
CCT6A-209ENST00000494736 EMILIN3Q9NT22 766 aa14.65□□□□□ -0.06
CCT6A-209ENST00000494736 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
CCT6A-209ENST00000494736 CAMK2BQ13554 666 aa14.61□□□□□ -0.07
CCT6A-209ENST00000494736 ZNF687Q8N1G0 1237 aa14.61□□□□□ -0.07
CCT6A-209ENST00000494736 PLSCR2Q9NRY7 297 aa14.56□□□□□ -0.08
CCT6A-209ENST00000494736 MAP3K9P80192 1104 aa14.54□□□□□ -0.08
CCT6A-209ENST00000494736 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
CCT6A-209ENST00000494736 EVI5O60447 810 aa14.53□□□□□ -0.08
CCT6A-209ENST00000494736 ANO8Q9HCE9 1232 aaPredicted RBP14.52□□□□□ -0.09
CCT6A-209ENST00000494736 PSDA5PKW4 1024 aaPredicted RBP14.51□□□□□ -0.09
CCT6A-209ENST00000494736 POTEEQ6S8J3 1075 aa14.5□□□□□ -0.09
CCT6A-209ENST00000494736 WDR70Q9NW82 654 aa14.49□□□□□ -0.09
CCT6A-209ENST00000494736 DPYSL4O14531 572 aa14.48□□□□□ -0.09
CCT6A-209ENST00000494736 E2F4Q16254 413 aa14.47□□□□□ -0.09
CCT6A-209ENST00000494736 SPNS2Q8IVW8 549 aa14.46□□□□□ -0.09
CCT6A-209ENST00000494736 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
CCT6A-209ENST00000494736 AXIN2Q9Y2T1 843 aa14.44□□□□□ -0.1
CCT6A-209ENST00000494736 PBX2P40425 430 aa14.43□□□□□ -0.1
CCT6A-209ENST00000494736 FOSBP53539 338 aa14.43□□□□□ -0.1
CCT6A-209ENST00000494736 ZNF454Q8N9F8 522 aa14.43□□□□□ -0.1
CCT6A-209ENST00000494736 JPH4Q96JJ6 628 aa14.4□□□□□ -0.1
CCT6A-209ENST00000494736 LSM11P83369 360 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCT6A-209ENST00000494736 ARHGAP33O14559 1287 aa14.37□□□□□ -0.11
CCT6A-209ENST00000494736 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
CCT6A-209ENST00000494736 PSEN2P49810 448 aa14.36□□□□□ -0.11
CCT6A-209ENST00000494736 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
CCT6A-209ENST00000494736 PDIA6Q15084 440 aa14.35□□□□□ -0.11
CCT6A-209ENST00000494736 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
CCT6A-209ENST00000494736 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
CCT6A-209ENST00000494736 PCDHGA10Q9Y5H3 936 aa14.34□□□□□ -0.11
CCT6A-209ENST00000494736 DMRTA1Q5VZB9 504 aa14.33□□□□□ -0.12
CCT6A-209ENST00000494736 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
CCT6A-209ENST00000494736 ZDHHC16Q969W1 377 aa14.32□□□□□ -0.12
CCT6A-209ENST00000494736 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
CCT6A-209ENST00000494736 ABCC9O60706 1549 aa14.31□□□□□ -0.12
CCT6A-209ENST00000494736 SPDYE16A6NNV3 312 aaPredicted RBP14.31□□□□□ -0.12
CCT6A-209ENST00000494736 PTGER2P43116 358 aa14.31□□□□□ -0.12
CCT6A-209ENST00000494736 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
CCT6A-209ENST00000494736 PHF14O94880 888 aa14.29□□□□□ -0.12
CCT6A-209ENST00000494736 KCNV2Q8TDN2 545 aa14.29□□□□□ -0.12
CCT6A-209ENST00000494736 DDX12PQ92771 950 aa14.28□□□□□ -0.12
CCT6A-209ENST00000494736 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.13
CCT6A-209ENST00000494736 PTPREP23469 700 aa14.24□□□□□ -0.13
CCT6A-209ENST00000494736 ADGRD1Q6QNK2 874 aa14.24□□□□□ -0.13
CCT6A-209ENST00000494736 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
CCT6A-209ENST00000494736 EPAS1Q99814 870 aa14.24□□□□□ -0.13
CCT6A-209ENST00000494736 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
CCT6A-209ENST00000494736 TK2O00142 265 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms